Callithrix jacchus (white-tufted-ear marmoset): 100385319
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Entry
100385319 CDS
T03264
Symbol
LDLR
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03272
Virion - Hepatitis viruses
cjc04144
Endocytosis
cjc04913
Ovarian steroidogenesis
cjc04925
Aldosterone synthesis and secretion
cjc04927
Cortisol synthesis and secretion
cjc04934
Cushing syndrome
cjc04976
Bile secretion
cjc04979
Cholesterol metabolism
cjc05145
Toxoplasmosis
cjc05160
Hepatitis C
cjc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100385319 (LDLR)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100385319 (LDLR)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
100385319 (LDLR)
04925 Aldosterone synthesis and secretion
100385319 (LDLR)
04927 Cortisol synthesis and secretion
100385319 (LDLR)
09154 Digestive system
04976 Bile secretion
100385319 (LDLR)
04979 Cholesterol metabolism
100385319 (LDLR)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
100385319 (LDLR)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100385319 (LDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100385319 (LDLR)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
100385319 (LDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100385319 (LDLR)
Membrane trafficking [BR:
cjc04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100385319 (LDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF_LRP2
EGF
EGF_3
hEGF
Psg1
Motif
Other DBs
NCBI-GeneID:
100385319
NCBI-ProteinID:
XP_002761791
Ensembl:
ENSCJAG00000005907
UniProt:
U3DIM9
F6W4Q9
LinkDB
All DBs
Position
22:9901226..9942331
Genome browser
AA seq
860 aa
AA seq
DB search
MGLWGWELRWTVALLLYAAGAAVGNRCERNEFQCQDGKCISYKWVCDGRPECQDGSDESQ
ETCLSVSCRSEDFSCGGRVNHCIPQLWRCDGQVDCENGSDEQGCVPKTCSQDEFRCHDGK
CISKQFLCDSEPDCLDGSDEDSCPMVTCGPASFRCNSSTCIPQLWACDNDPDCEDGSDEW
PERCGGLDVSQQNNGPCSAFEFQCRSGECIHSGWHCDGDPDCKDKSDEDNCTVATCRPDE
FQCSDGNCIHGSRQCDQENDCKDMSDEVGCVNVTLCEGPNKFKCHSGECIALNKVCNSAR
DCRDWSDEPLKECGTNECLDNNGGCSHICNDLKIGHECLCPDGFQLVAQRRCEDIDECQD
PDTCSQLCVNLEGSYKCQCEEGFQLDPHTKACKAVGSIAYLIFTNRHEVRKMTLDRSEYT
SLIPNLRNVVALDMEVASNRIYWSDLSQRVIYSTQLDGAHGFSSYNTVISKDLQAPDGLA
VDWIHSNIYWTDSVLGTVSVADTRGVKRKTLFRETGSKPRAIVVDPVHGFMYWTDWGISA
KIKKGGLNGVDVYSLVTDNIQWPNGITLDLPRGRLYWADSKLHSISSIDVNGGNRKTILE
DEDRLAHPFSLAIFEDKVFWTDIINEAIFSANRLTGSDVHLLAENLLSPEDMVLFHNRTQ
PSGVNWCERTTLSNGGCQYLCLPAPQINPRSPKFTCACPDGMLLARDMRSCLTEAEPTVA
TQETSTVRRMGSSTAARTQHTTTQPVADTSRLPGSTPELTTAEIVTMSHQALGDVAGRGT
EEKPRSVGALSIILPIVLLVFLCVGAFLLWRNWRLKSINSINFDNPVYQKTTEDEVHICR
SQDGYSYPSRQMVSLEDDVA
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggggctctggggctgggaactgcgctggaccgtcgccctgctcctctacgcggcgggg
gctgcagtgggcaacagatgtgaaagaaatgagttccagtgccaagacgggaaatgcatc
tcctataagtgggtctgtgatggccgcccagagtgccaggatggctctgatgaatcccag
gagacgtgcttgtctgtcagctgcagatccgaggacttcagctgtgggggccgtgtcaac
cactgcattcctcagctctggaggtgcgatggccaggtggactgtgagaacggctcggac
gagcaaggctgcgtccccaagacgtgctcccaggatgagtttcgctgccacgatggaaaa
tgcatctccaagcagttcctctgtgactcagaaccagattgcttggacggctcagacgag
gactcctgcccgatggtcacctgcggccccgccagcttccgttgcaacagctccacttgc
atccctcagctgtgggcctgtgacaacgaccccgattgcgaagatggctcggatgaatgg
ccggagcgctgtgggggtcttgacgtgtcccaacagaacaatggcccctgctcggccttc
gagttccagtgtcgaagtggcgagtgcatccactctggctggcactgtgatggcgacccc
gactgcaaggacaagtctgacgaggataactgcactgtggccacctgccgccctgatgaa
ttccagtgctctgatggaaactgcatccacggcagccgccagtgtgaccaggagaatgac
tgcaaggacatgagcgatgaagttggctgtgttaatgtgacactgtgcgaggggcccaac
aagttcaagtgtcacagtggcgaatgcatcgccctgaacaaagtctgcaactcagctcga
gactgccgggactggtcggatgaacccctcaaggagtgcgggaccaacgaatgcttggat
aacaacggcggctgctcccacatctgcaacgaccttaagattggccacgagtgcctctgc
cccgacggcttccagctggtggcccagcgaagatgcgaagatattgacgagtgtcaggac
cctgacacctgcagccagctctgtgtgaacctggagggcagctacaagtgccagtgtgag
gaaggcttccagctagacccccacaccaaggcctgcaaggctgtgggctccattgcctac
ctcatcttcaccaaccggcatgaggtcaggaagatgacactggaccggagcgagtacacc
agcctcatccccaacctgcggaacgtggtcgctctggacatggaggtggccagcaaccga
atctactggtccgacctgtcccagagagtgatctacagcacccagcttgatggagcccac
ggcttttcctcctacaacaccgtcatcagcaaggacctccaggcccccgacgggctggcc
gtggactggatccacagcaacatctactggaccgactctgtcctgggcaccgtctccgtc
gcggataccaggggtgtgaagaggaaaacgctcttcagggagaccggctccaagccaagg
gccatcgtggtggatcccgttcatggcttcatgtactggactgactggggcatctccgcc
aagatcaagaaagggggcctgaacggtgtggacgtctattcgctggtgactgacaacatc
cagtggcccaatggcatcaccctagaccttcccaggggccgcctgtactgggctgactcc
aaacttcactccatctcaagcatcgatgtcaatgggggcaaccggaagaccatcctggag
gacgaggacaggctggcacaccccttctccttggccatcttcgaggacaaagtattttgg
acagatattatcaatgaagccattttcagcgccaaccgcctcacaggctccgatgtccat
ttattggcagaaaacctgctgtccccagaggatatggtccttttccacaaccgcacccag
ccaagcggagtgaactggtgtgagaggaccaccctgagcaacggcggatgccagtacctg
tgtctccccgccccccagatcaacccccgctcacccaagtttacctgtgcttgccccgac
ggcatgctgctggccagggacatgaggagctgcctcacagaggctgagcccactgtggcc
acccaagagacctccaccgtcaggcgaatgggcagctccacagctgcacggacccagcac
acaaccacccagcctgttgctgacacctcccggctacctgggtccacccctgagctcacc
acagcagagatagtgacaatgtctcaccaagccttgggtgacgttgctggccgaggaact
gaggagaagcccaggagtgtgggggctctgtccatcatcctccccatcgtgctccttgtt
ttcctctgcgtcggggccttcctcctctggaggaactggcggcttaagagcatcaacagc
atcaactttgacaaccccgtctaccaaaagaccacggaggacgaggtccacatttgccgc
agccaggacggctacagctacccctcgagacagatggtcagtctggaggatgacgtggcg
tga
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