Callithrix jacchus (white-tufted-ear marmoset): 100389852
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Entry
100389852 CDS
T03264
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc01521
EGFR tyrosine kinase inhibitor resistance
cjc04010
MAPK signaling pathway
cjc04014
Ras signaling pathway
cjc04015
Rap1 signaling pathway
cjc04020
Calcium signaling pathway
cjc04072
Phospholipase D signaling pathway
cjc04151
PI3K-Akt signaling pathway
cjc04510
Focal adhesion
cjc04540
Gap junction
cjc04630
JAK-STAT signaling pathway
cjc04810
Regulation of actin cytoskeleton
cjc05165
Human papillomavirus infection
cjc05200
Pathways in cancer
cjc05206
MicroRNAs in cancer
cjc05214
Glioma
cjc05215
Prostate cancer
cjc05218
Melanoma
cjc05230
Central carbon metabolism in cancer
cjc05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
100389852 (PDGFRB)
04015 Rap1 signaling pathway
100389852 (PDGFRB)
04630 JAK-STAT signaling pathway
100389852 (PDGFRB)
04072 Phospholipase D signaling pathway
100389852 (PDGFRB)
04151 PI3K-Akt signaling pathway
100389852 (PDGFRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100389852 (PDGFRB)
05206 MicroRNAs in cancer
100389852 (PDGFRB)
05230 Central carbon metabolism in cancer
100389852 (PDGFRB)
05231 Choline metabolism in cancer
100389852 (PDGFRB)
09162 Cancer: specific types
05214 Glioma
100389852 (PDGFRB)
05218 Melanoma
100389852 (PDGFRB)
05215 Prostate cancer
100389852 (PDGFRB)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100389852 (PDGFRB)
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
100389852 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cjc01001
]
100389852 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cjc04090
]
100389852 (PDGFRB)
Enzymes [BR:
cjc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
100389852 (PDGFRB)
Protein kinases [BR:
cjc01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
100389852 (PDGFRB)
CD molecules [BR:
cjc04090
]
Proteins
100389852 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
ig
Ig_3
I-set
Ig_2
V-set
VEGFR-1-like_Ig-like
C1-set
VEGFR1-3_N_Ig-like
TrmE_N
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
100389852
NCBI-ProteinID:
XP_035144293
Ensembl:
ENSCJAG00000021070
LinkDB
All DBs
Position
2:complement(46890896..46933989)
Genome browser
AA seq
1108 aa
AA seq
DB search
MQLPGVMPALALKGQLLLLPLLLLLEPQVSQGLVITPPGPELVLNVSSTFVLTCSGSAPV
VWERMSQEPPQEMAKAQDGSFFSVLTLSNLTGLDTGEYFCTYNDSHGLELDERKRLYIFV
PDPTVVFLPNDAEELFIFLTEITETTIPCRVTDPQLVVTLHEKKGDVALPVLYDHQRGFS
GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGN
EVVNFEWTYPRQESGRLVEPVTDFLLDMPYHIRSILHIPSAELDDSGTYICNVTESVNDH
QDEKAINVTVVESGYVRLLGELGALQFAELHRSRTLQVVFEAYPPPTVLWFKDNRTLGDS
SAGEIALSTRNVSETRYVSELTLVRVKVAEAGHYTMRAFHEDAEVQLSFQLQINVPVRVL
ELSESHPDSGEQTVRCRGRGMPQPDIIWSACRDLKRCPRELPPTLLGNSSEEESQLETNV
TYWEEEQEFEVVSTLRLQHVDRPMSVRCTLRNAVGQDMQEVIVVPHSLPFKVVVISAILA
LVVLTIISLIILIMLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWELPRDQL
VLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGP
HLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQHHSDKRRPPSAELYSNAL
PVGIPLPSHVSLTGESDGGYMDMSKDESVDYVPMLDMKGDVKYADIESSNYTAPYDNYVP
SAPERTCQATLINESPVLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLV
KICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLG
GTPYPELPMNEQFYNAIKRGYRMAQPVHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLER
LLGEGYKKKYQQVDEEFLRSDHPAILRSQARLPGFHGLRSPLDTSSVLYTAVQPNESDND
YIIPLPDPKPEVADEGPLEGSPSLASSTLNEVNTSSTISCDSPLEPQEEPEPEPQLELQV
EPDPEPELEQPPDSGCPAPRPEAEDSFL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttccgggtgtgatgccagctctggccctcaaaggccagctgctgttgctgccc
ctgctgttactgctggagccacaggtctctcagggcctggtcatcacacccccagggcca
gagcttgtcctcaatgtctctagcaccttcgttctgacctgctcgggttcagctccagtg
gtatgggaacggatgtcccaggagcccccgcaggaaatggccaaggcccaggacggcagc
ttcttcagtgtgctgacactgagcaacctcactgggctagacacgggagaatacttctgc
acctacaatgactcccatggcctggagctcgatgagcggaaacggctctacatctttgtg
ccagatcccactgtggtcttcctccctaatgatgccgaggaactattcatctttctcacg
gaaataactgagaccacaattccgtgccgagtgacagacccgcagctggtggtgacactg
catgagaaaaaaggggacgttgcactgcctgtcctctacgatcaccaacgaggcttttct
ggtatcttcgaggacagaagctacatctgcaaaaccaccattggggacagggaggtggat
tccgacgcctactatgtctacagactccaggtgtcatccatcaacgtctctgtgaacgct
gtgcagactgtggtccgccagggcgagaacatcaccctcatgtgcatcgtgattgggaat
gaggtggtcaactttgagtggacgtacccccgccaagagagcgggcggctggtggagccg
gtgaccgacttcctcttggatatgccttaccacatccgctccatcctgcacatccccagt
gccgagttggacgactcggggacctacatctgcaatgtgacagagagtgtgaatgaccat
caggatgaaaaggccatcaacgtcactgtggttgagagtggctacgtgcgtctcctggga
gagctgggtgctctacagtttgccgagctgcaccgaagccggacgctgcaggtagtgttt
gaggcctacccgccacccactgtcctgtggttcaaagacaaccgcaccctgggtgactcc
agcgctggcgagatcgccctgtccacccgcaacgtgtcggagacccggtacgtgtcagag
ctgaccctcgttcgcgtgaaggtggcagaggctggtcactacaccatgcgggccttccat
gaggatgctgaggtccagctctccttccagctgcagatcaatgttcctgtccgcgtgctg
gagctaagcgagagccaccctgacagtggggaacagactgtccgctgtcgtggcaggggc
atgccccagccggatatcatctggtctgcctgcagagacctcaaaaggtgtccacgggag
ctgccgcccacattgctggggaacagttccgaagaggagagccagctggagacgaacgtg
acatactgggaggaggagcaggagtttgaggtggtgagcactctgcgtctgcagcacgtg
gatcggccaatgtcggtgcgctgcacgctgcgcaacgctgtgggccaggacatgcaggag
gtcatcgtggtgccacactccctgcccttcaaggtggtggtgatctcagccatcctggcc
ctggtagtcctcaccatcatctcccttatcatcctcatcatgctttggcagaagaaacca
cgttacgagatccgatggaaggtgattgagtctgtgagctctgacggccatgagtacatc
tacgtggatcccatgcagctgccctatgactctacgtgggagctgcctcgggaccagctt
gtgctgggacgtaccctcggctctggggcctttgggcaggtggtggaggccacggctcat
ggcctgagccattctcaggccacaatgaaagtggccgtcaagatgctgaaatccacagcc
cgaagcagtgagaagcaagcccttatgtcggagctgaaaatcatgagccaccttgggcct
cacctgaacgtggtcaacctgctgggggcctgcaccaaaggaggacccatctatatcatc
actgagtactgccgctacggagacctggtggactacctgcaccgcaacaagcacaccttt
ctgcagcaccactccgacaagcgccgcccgcccagtgcagagctctacagcaatgcactg
cccgttgggatcccactgcccagccatgtgtccctgaccggggagagcgacggtggctac
atggacatgagcaaggatgagtctgtggactacgtgcccatgctggacatgaaaggagat
gtaaaatatgcagacatcgagtcctccaactacacggccccttatgataactatgttccc
tctgcccctgagaggacctgtcaggcgactttgatcaacgagtctccagtacttagctac
acggacctcgtgggcttcagctaccaggtggccaatggcatggagttcctggcctccaag
aattgcgtccaccgagacctggcggccaggaatgtgctcatctgcgagggcaagctggtc
aagatctgtgactttggcctggctcgagacatcatgcgagactcaaactacatctccaaa
ggcagcacctttttacctttgaagtggatggccccggagagcatcttcaacagcctctac
accaccctgagtgacgtgtggtccttcgggatcctgctgtgggagatcttcactttgggt
ggcaccccttacccggagctgcccatgaacgagcagttctacaatgccatcaagcggggg
taccgcatggcccagcctgtccacgcctccgatgagatctacgagatcatgcagaagtgt
tgggaagagaaatttgagattcggccccccttctcccagctggtgctgcttctcgagaga
ctgctgggcgaaggttacaaaaagaagtaccagcaggtggatgaggagtttctgaggagt
gaccacccagccattcttcggtcccaggcccgcttgcctgggttccatggcctccggtct
cccctggacaccagctccgtcctctacactgctgtgcagcccaatgagagtgacaacgac
tatatcatccccctgcctgaccccaaacccgaggttgctgacgagggcccactagagggt
tcccccagcctagccagctccaccctgaatgaagtcaacacctcctccaccatctcctgt
gacagccccctggagccccaggaggaaccagagccagagccccagcttgagctccaggtg
gagccggacccagagcccgagctggagcagccgccggattcagggtgccccgcacctagg
ccagaagctgaggatagctttctgtag
DBGET
integrated database retrieval system
