Callithrix jacchus (white-tufted-ear marmoset): 100394473
Help
Entry
100394473 CDS
T03264
Symbol
TTC3
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3 isoform X2
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjc04121
]
100394473 (TTC3)
Enzymes [BR:
cjc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100394473 (TTC3)
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100394473 (TTC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
WHD_TTC3
TTC3_9th
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_Vps41
zf-RING_5
zf-RING_11
TPR_1
zf-C3HC4_3
TPR_12
TPR_2
Prok-RING_4
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
100394473
NCBI-ProteinID:
XP_008984911
Ensembl:
ENSCJAG00000002640
LinkDB
All DBs
Position
21:41309383..41432549
Genome browser
AA seq
1694 aa
AA seq
DB search
MLGEYDWALQANIKAQKLCKNDPEGIKDLIQQHVKLQKQIEDLQGRTANKNPIKAFYENR
AYIPRSLSGPIFSTSLNFVEKKRDFRKINHKMANGGNQNPKVVDEAMKVDDCDCHPEFSP
PPSQPPKHKGKQKSRNNESEKFSSSSQLTLPADLKNILEKQFSKSSRAAHQDFANIMKML
RSLIQDGYTALLEQRCRSAAQAFTELLNGLDPQKIKQLNLAMINYVLVVYGLAVSLLGIG
QPEELSEAENQFKRIIEHYPNEGLDCLAYCGIGKVYLKKNRFLEALNHFEKARTLIYRLP
GVLTWPTSNVIIEESQPEKIKMLLEKFVEECKFPPVPDAICCYQKCRGYSKIQIYITDPD
FKGFIRISCCQYCKIEFHINCWKKLKTTTFNDKIDKDFLQGICLTPDCEGIISKIIIFSS
GGQVKCEFEHKVIKEKVPPRPILKQKCSSLEKLKLKEDKKLKRKIQKQEAKKLAQERMEE
DLRESNPPKNEEQKETVDNVQHCQFIDDRILQCIKQYADKIKSGIRNTATLLKELLSWKV
LSTEDYTTCFSSRNFLNEAVDYVIRHLIQEKNRVKTRIFLHVLSELKEVEPKLATWIQKL
DSFGLDATGPFFSRYGASLKQLDFSIMTFLWNEKYGQKLASIEGKKLDYFYEPASLKEAR
CLIWLLEEHRDKFPALHSALDEFFDIMDSRCTVLRKQDSGEAPFSSTKVKNKGKKKKPKD
SKPMLVGSGTTSVTSNSEIITSSEDHNNRNSDSAGPFAVPDHLRQDVEEFEALYDQHSNE
YVVRNKKLWDINPKQKCSTLYDYFSQLLEEHGPLDMSNKMFSEEYEFFPEETRQILEKAG
GLKSFLLGCPRFVVIDNCIALKKVALRLKKKRKKKNIKTKVEEISKTGEYLRVRLPLNPA
AREFKPDVKSKPVSDTSAATASEAVKPKPVTANSPKPACEDVKPKPASNNSSRQVSEDGK
PKGVPPNSPKPGSEDANYKRLSSNSPKPLLEDMKPTYWAQSHLVTGYCTYLPFQGFDITQ
TPPAYINVLPGLPQYTSIYTPLASLSPEYPLPRSIPMVPSFVANDRADKNAAVYFEGHHL
NAENAARHQIASETQILDTSSGISVKSQCSTGDADTVLSESNRDGGHCGNSNNRFEVIPE
NTSTVTNIPRMQMVAIQVSWNIAHKEVNTEPYNPFEEDQGEISRIEKEYHVLQEQLKEAY
ENYEQIKLKGLEETRDLEEKLKRNLEENKISKTELDWFLQDLEREIKKWQQEKKEIQERL
KSLKKKMKKISNAGEMNTQKTDGKDEEHELHLDQSLEISSTFTNEKMKIEERIKKGKEDC
EESHQRAVAAEVSILENWKESEVYKLQIMESQAEAYLKKLEQISRDSAAYPDMESDICSW
ELFLSNVTKEIEKAKSQFEEQIKAIRNGSRLSELSKVQISELSFPACNMAHAESLTDSSG
HDDQGLVTSASDVTGSHAAVPRDPSVFSAGESPEEAPPALLPGPPPSQPDATQLPGPERA
GQAPLSQQSPVANQKQRAPPGRAARSSQSPKKPFNSIIEHLSVVFPCYNSTELAGFIKKV
RSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDKRTCEPISAAPVTRSSQGPPSA
IAPSPKTKGQKAEDVPLRVAPAVSSCEICHEVFKSKNVRVLKCGHKYHKGCFKQWLKGQS
ACPACRRRDLLSEE
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgctgggggaatatgactgggccctgcaagcaaacattaaagctcaaaaactctgtaaa
aatgaccctgagggaatcaaggatctaattcagcagcatgtaaagttacaaaaacaaata
gaagacctgcaaggtcgaacagcaaataagaatccaattaaagccttttacgaaaacagg
gcctatatacctaggagtttatcaggacctatatttagtacttcacttaactttgtggaa
aagaaaagagatttcagaaaaattaatcacaaaatggcaaacggtggtaatcagaatcca
aaggtggtggatgaggcaatgaaggtagatgattgtgactgtcatcctgaattttcacca
ccaccaagtcagcctccaaaacataaaggaaaacaaaagtctcgaaacaatgaatcagag
aagttcagttctagttcacaattgactttaccagcagatttgaagaacatcttggagaaa
caattttctaaatcttccagagctgcacaccaggattttgctaatataatgaaaatgctg
agaagcctgattcaagatggctatacagctttgctggagcagcgatgccgcagtgccgca
caggccttcacagagctgctgaacggcttagatcctcaaaaaataaagcaactgaacctg
gccatgattaactatgtcttggttgtctatggacttgccgtttctctccttggaataggg
cagcctgaggaattatctgaagctgaaaaccagtttaagaggattattgaacactacccc
aatgagggacttgactgcctggcctactgtggaattggaaaagtatatttgaaaaaaaac
agatttctagaagctctcaatcactttgagaaagcaagaaccttgatttatcgtcttcct
ggagtgttaacttggcccacaagtaatgtgattattgaagagtctcagccagaaaaaata
aagatgctgttagagaaatttgttgaagaatgcaagttccctccagtgccagatgccatt
tgttgctatcagaagtgccgtggatattctaagatccagatttacataactgatccagac
tttaagggttttattcgaatcagctgttgccaatactgtaaaatagaatttcacatcaat
tgctggaagaagttaaaaactacaacctttaatgataaaattgacaaggattttcttcaa
ggaatatgtcttacccctgactgtgaaggtattatttctaagattatcatcttcagtagc
ggtggtcaagttaaatgcgaatttgaacacaaggtcataaaagaaaaggttcctccaaga
cctattctgaaacagaaatgttctagcctagagaaactaaaactgaaagaagacaaaaag
ttgaagagaaagattcaaaaacaagaagcaaaaaaattagcacaagaaagaatggaagag
gacttaagagaaagtaacccacccaaaaacgaagagcagaaagaaactgtagacaatgtt
cagcattgtcagttcattgatgacagaattctgcagtgtataaagcagtatgctgacaag
attaaatctggcatacggaatacagccacacttctcaaagaattgctttcttggaaagtt
ttgagcacagaagactatacaacctgtttttctagcagaaattttctaaatgaagcagtg
gactatgttattcgtcacttgattcaagaaaagaacagagtaaagacaaggatatttctg
catgttttaagtgagcttaaagaagtggaacccaaattagccacctggatccaaaaactt
gatagctttggcttagatgccacaggacctttcttttctcgttacggagcatctcttaaa
cagcttgattttagcatcatgactttcctctggaatgagaaatatggtcagaaactagcc
tctattgaaggaaagaaacttgattatttctatgagccagcgtcattgaaggaagcccgt
tgtttaatatggctgctggaagaacacagagacaagttcccagcactgcatagtgcttta
gatgaattctttgatataatggacagccgctgtactgtgttaaggaaacaagacagtggt
gaagcaccgtttagttctaccaaggtgaaaaacaaaggcaagaaaaagaaaccaaaggat
tcaaagcctatgttagttgggtctggaacaacttcagtaacttcaaatagtgagatcatc
acttcaagtgaagaccataacaatcgaaattcagattctgcaggcccatttgcagtgcct
gaccatcttcgacaagacgtagaagaattcgaagctctctatgaccaacacagtaatgaa
tatgttgtccgcaataagaagctatgggacattaacccaaaacaaaaatgttcaactcta
tatgattacttctctcagttgttggaggaacatggtcccttggacatgagcaacaagatg
ttctctgaagaatatgagtttttcccagaagaaactcgacagatactagaaaaagcagga
ggcttaaaatctttcctcttgggatgtcctcgttttgttgtgattgacaactgtattgca
ttgaagaaagttgcattacggctcaagaaaaaaagaaagaagaaaaacattaaaacaaaa
gtagaagaaatttcaaaaacaggagagtatttacgagttagactaccactgaatccagcg
gctagggaatttaaaccagatgtaaaatctaaaccagtgtccgatacatctgcagcaaca
gcttctgaggctgtgaaacccaaaccagtgactgcaaattctcccaaaccagcttgtgaa
gatgtgaagcccaaaccggcatccaataattcttctagacaagtttctgaggatgggaaa
cccaaaggggtccctcctaattctcccaagccaggctctgaggatgcaaattacaagcga
ctctcctctaattctcccaaaccgcttcttgaggatatgaaaccgacttactgggctcaa
tcccatttggtcacaggatactgtacgtatcttcctttccagggatttgacatcacccag
acaccgccagcatacataaacgtgttaccaggtttgccccagtacaccagcatttataca
cccttggccagcctttctcctgaatatccgctgccaagatcaataccaatggtgccgtct
tttgtagccaatgacagagcagataaaaatgctgctgtgtattttgagggtcatcatttg
aatgctgagaatgctgctcgtcaccagattgcctctgaaacacagatccttgacacctct
tcgggaatatctgtaaagtcacagtgcagcacgggtgatgctgatacagtcctgagtgag
tctaacagagatggtgggcactgtggcaattctaacaacagatttgaagtcattccggaa
aacaccagcacagtaacaaacattccacgcatgcagatggttgccatacaggtatcctgg
aacatagcacacaaggaagtcaatactgagccatataatccttttgaggaagatcaaggg
gaaatttcacggattgaaaaggagtaccacgtattacaagagcagcttaaagaagcatat
gaaaattatgagcagataaaacttaagggcttagaagagaccagggacctggaagaaaag
ttgaaaaggaacttagaagaaaacaagatctcaaagacggaattagattggtttcttcaa
gatttggaaagagaaattaaaaaatggcaacaggaaaaaaaagaaatccaagaaagacta
aaatcactgaagaagaaaatgaaaaagatttcaaatgccggtgaaatgaatacccagaaa
actgatggaaaggatgaggaacatgaattacatctggatcagtcccttgaaatcagcagc
acatttacaaacgagaaaatgaaaatagaagagcgtataaagaaagggaaagaggattgt
gaagagagtcatcagagagctgtggctgcagaggtatccattcttgaaaactggaaggag
agtgaagtgtataagctgcagatcatggagtcacaggcagaagcctatctgaagaagctg
gagcagattagccgtgattctgcagcatatcctgatatggagtctgatatatgttcgtgg
gaattgtttctttctaatgttacaaaagaaattgagaaagcaaagtctcaatttgaagaa
caaattaaggcaattagaaatggttctcggctcagcgaactttctaaagtgcagatttct
gagctttcatttcccgcctgtaacatggctcatgccgagtcactcactgactcctcaggc
cacgatgaccaagggcttgtgacttctgcaagcgacgtgactggaagccacgcagcagtt
cccagggatcccagtgtgttctctgccggcgagtcccccgaggaggctcctcctgcactc
ttgccagggccgccccccagtcagcctgatgccactcagctgccagggccagaaagggct
ggccaggctcctctgtcacagcaaagccctgtggctaatcagaagcaacgtgctcctcca
ggacgtgctgcacggtcaagccagtctccaaagaagccattcaatagcattattgagcac
ctgtcagtggtattcccatgttacaacagcaccgagcttgctggtttcattaaaaaagtg
cgaagcaaaaacaagaactcactctcagggttgagtattgatgaaattgtccaaagagtg
acagaacacattctggatgaacagaaaaagaaaaagccaaacccaggaaaggacaagagg
acatgtgagcccatctctgccgcccctgtgaccaggtcctcccagggcccaccctcggcg
attgcaccgtcacccaaaaccaaggggcagaaagcagaagatgtccctttgagggttgca
ccagctgtgagttcctgtgaaatatgccatgaagtcttcaaatcaaaaaatgtgcgtgtg
ctcaaatgtgggcacaagtatcacaaggggtgcttcaagcagtggcttaaagggcagagc
gcttgcccggcctgccggcgtcgtgatctcctgtcggaagagtag
DBGET
integrated database retrieval system
