Callithrix jacchus (white-tufted-ear marmoset): 100396533
Help
Entry
100396533 CDS
T03264
Symbol
PLEKHM1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04140
Autophagy - animal
cjc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100396533 (PLEKHM1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100396533 (PLEKHM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100396533 (PLEKHM1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
100396533 (PLEKHM1)
Membrane trafficking [BR:
cjc04131
]
SNARE
SNARE associated proteins
Others
100396533 (PLEKHM1)
Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
100396533 (PLEKHM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
OapC
Motif
Other DBs
NCBI-GeneID:
100396533
NCBI-ProteinID:
XP_035159053
Ensembl:
ENSCJAG00000012852
UniProt:
F7I686
LinkDB
All DBs
Position
5:complement(81821898..81876664)
Genome browser
AA seq
1061 aa
AA seq
DB search
MLSVVENGLDPRAAIPVIKKKLVGSVKALQKQYVSLDTVVTSEDGDANTMCSALEAVFIH
GLHAKHIRAEAGGKRKKSAHQKPLPQPVFWPLLKAVTHKHIISELEHLTFVNTDVGRCRA
WLRLALNDGLMECYLKLLLQEQARLCEYYQPTALLRDAEEGEFLLSFLQGLTSLSFELSY
KSAILNEWTLTPLALSGLCPLSELDPLSTSCAELQRKESLDSISHSSGSEDIEVQHSGHK
IRRNQKLTASSLSLDMASSSQLSCSLNSDSCLLQENGSKSPDRFEEPMFYDSDLGTANAE
DSDRSLQEVLLEFSKAQVNSVPTNGLSQEMEIPTPQATLCLRGLNTSTHAHCEAPAEPLP
AQAASGTQDDVHPQELHPQSPSTLDLQQLGTAQAAPADSTTGQQPSSTVSKTVGPGNGWQ
KAPAHDGAGPKLVVSSPTSPKNKSWISEDDFYRPSQEQPLESASDHPIASSRGTRESRPG
LHRHFSQGPRKSCSLGALDQVCVPSPGGRQTKAAPAQGHKSFRVVHRRQIGLSNPFRGLM
KLGTVERRGAMGIWKELFCELSPLEFRLYLSNEERTCVENCSLLRCESVGPAHSDGRFEL
VFSGKKLALRASSQDEAEDWLDRVREALQKVRPQQEDEWVNVQYPDQPEDSPEAPQGGCP
SQSDLLSEPVALQGTQFDWSSAQVPEPDAIKESLLFLYMDRTWMPYIFSLSLEALKCFRV
RNNEKMLSDSHGVETIRDILPDTSLGGPSFFKIITAKAVLKLQAGNAEEATLWRNLVRKV
LASYLETAEEAVTLGGSLDENCQEVLKFATRENGFLLQYLVAIPTEKGLDSQGCFCAGCS
RQIGFSFVRPKLCAFSGLYYCDICHQDDASVIPARIIHNWDLTKRPICRQALKFLTQIRA
QPLINLQMVNASLYEHVERMHLIGRSREQLKLLGDYLGLCRSGALKELSKRLNHRNYLLE
SPHRFSVADLQQIADGVYEGFLKALIEFASQHVYHCDLCTQRGFICQICHHHDIIFPFEF
DTTVRCAECKTVFHQSCQAVVKKGCPRCARRRKYQEQNVFT
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgctctcagtggtggagaatggactggacccccgggctgccatcccggtcatcaagaag
aagctggtgggatccgtgaaggccttgcagaagcagtatgtgtccctggacacagtggtc
actagtgaagacggagatgccaataccatgtgcagtgccctggaggctgtttttatccat
ggcctgcacgccaagcacatccgagctgaggccggaggaaaaaggaagaaaagtgcccac
cagaagcctctgccccagcctgtcttctggcccctcctgaaagctgtcacccacaaacac
atcatctcagagttggagcacctgacgtttgtcaacacagacgtgggccgctgccgggca
tggctacggctggccctgaacgacggcctgatggagtgctacctgaagctgctgctgcag
gagcaggcccgcttgtgcgagtactaccagcccaccgccctgctccgggacgccgaggag
ggcgagttcctcctgagcttcctgcagggcctcacgtccttgtcctttgaactctcctac
aagtctgccatcttaaatgagtggacgcttaccccactggccctgtctgggctttgcccg
ctttctgagctggaccctctctctacctcctgtgcagaactacagaggaaggaatctctg
gattccatttcccattcctcgggctctgaggacattgaagtccagcactcgggtcataag
atccggaggaaccagaagctcactgcctcctccctcagcctggacatggccagttcatcc
cagctgtcctgcagcctgaactctgatagctgcttactccaagagaatggctccaagagt
ccagaccgtttcgaggagcccatgttctacgactcagacctgggcacagcaaacgctgag
gactcagaccggtctctgcaagaggtattgttggaattcagcaaagcccaggtaaactct
gtgccaaccaatggactgagccaagaaatggagatccccacaccacaggccactctctgc
ctccgtggcctcaacaccagcacacatgcgcactgtgaggcacctgcagagccccttcct
gcccaggcagcctctggaactcaagatgatgtccacccacaggagctgcatccccagtca
cccagcaccctggacttacagcagctgggcactgctcaagctgcccctgcagatagcacc
acaggccagcagccttctagtactgtcagcaagacagtgggcccagggaatggctggcag
aaggccccggcacatgatggagctggaccgaagctggtagtttcctcacccaccagtccg
aaaaacaagagctggatctcggaagatgacttctaccggccttcccaggagcagcccctg
gagagtgcttcagaccaccccatagcttcttccagggggactcgagagtcaaggcctggt
ctccacaggcatttttctcaaggaccaagaaaaagctgttccctgggggcattagaccaa
gtgtgtgtgccttccccaggaggcaggcaaaccaaggcagccccagcacagggccataag
agcttccgggtggttcaccgcaggcagataggactgtccaacccattccggggtctcatg
aagctgggcaccgtggagcggcggggggcgatgggcatctggaaggagctcttctgtgag
ctctccccgctggagttccgcctctacctgagcaacgaagagcgcacctgtgtggagaac
tgctccctgctgcgctgtgagtctgtggggccagcccacagcgacgggcgctttgagcta
gtcttctctggcaagaagctggccctgcgtgcctcctcccaggatgaagccgaggactgg
ctggaccgggtgcgggaggccttgcagaaggtacggcctcagcaggaggatgagtgggtg
aacgtgcagtacccagaccaacctgaggactcccccgaggcaccccaaggcggctgcccc
tctcagtcggacctgctctcagagcctgtggccctccagggcacacagtttgactggtct
tctgcccaggttccagagccagacgccatcaaggagtccctgctgttcttgtacatggac
aggacctggatgccctatattttttccctgtccttagaggctctgaaatgctttcgcgtc
aggaacaatgagaagatgctgagtgacagccatggcgtggagaccatacgggacatcctg
ccggacacaagccttgggggcccgtccttctttaaaatcatcacggccaaggccgtcctg
aagctgcaggctgggaacgctgaggaggccaccctatggaggaacctggtccgaaaagtc
ctggcatcctacttagagacagctgaggaggcggtgactctgggcgggagcctggatgaa
aactgtcaggaggtgctgaaatttgccacccgggagaatggcttcctgctacaatacctg
gtggccatccccacagagaaaggccttgactcccaaggctgcttctgcgcaggctgctcc
cggcagatcggcttctcctttgtacgacccaagctctgtgccttctctggcctctattac
tgtgacatctgccaccaagacgatgcctcagtgattccagccaggatcatccacaactgg
gacctcaccaagcgcccgatctgcaggcaggccctgaagttcctgacgcagatccgggcc
cagcccctcatcaacctgcagatggtgaatgcgtctttgtacgagcatgtggagcggatg
cacctcatcgggagaagccgggaacagctgaagctcctgggggattacctgggtctgtgc
cgcagcggcgccctgaaggagctcagcaagaggctcaaccacaggaattatctcttggag
tctccacacaggttcagtgttgctgacctccagcagatcgcagatggggtatatgaagga
ttcctcaaggccctgattgaatttgcctcccagcatgtctaccactgcgacctgtgcacc
cagcgaggcttcatctgccagatctgccaccatcacgacatcatctttccctttgagttt
gacaccacagtcaggtgtgccgagtgcaagaccgtcttccaccagagctgccaggctgtg
gtgaagaagggctgcccccgctgtgcccgccggcgcaagtaccaggaacaaaacgttttc
acctga
DBGET
integrated database retrieval system
