Callithrix jacchus (white-tufted-ear marmoset): 100397263
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Entry
100397263 CDS
T03264
Symbol
APOBEC3C
Name
(RefSeq) LOW QUALITY PROTEIN: DNA dC->dU-editing enzyme APOBEC-3C
KO
K18750
C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03250
Viral life cycle - HIV-1
cjc05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100397263 (APOBEC3C)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100397263 (APOBEC3C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100397263 (APOBEC3C)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100397263 (APOBEC3C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NAD2
APOBEC2
NAD1
APOBEC_N
SNAD4
APOBEC3
APOBEC_C
APOBEC4_like
APOBEC4
APOBEC1
dCMP_cyt_deam_1
DUF7136
Toxin-deaminase
Motif
Other DBs
NCBI-GeneID:
100397263
NCBI-ProteinID:
XP_054114727
LinkDB
All DBs
Position
1:207166467..207168438
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AA seq
250 aa
AA seq
DB search
MRLLAKAAARVGGVVLVSRSEVDVPASRSDGVRKWLRRPSELRRSSGGFPVGPDPSCHAE
MCFLSWFCHNMLSPNKDYEVTWYASWSPCPECAGQVAEFLARHRNVRLTMFTARLYYFWN
PGFQQGLRRLSQEGASVLIMPYEDFKYCWDNFVYNDGQTFKPWKRLRXQLSIPVQNATGD
SPVKGLPGPPGLAALASCSSCEGLQPILDQLCFCRVILSSSCPQAHSTVLTASSQLSPAP
PAEAPFCLHG
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcctagcgaaagcggcggccagagtcgggggcgtagtcctagtgagcagaagc
gaagtcgacgtcccagcgagcagaagcgatggcgtccggaagtggctgcgccgtcccagc
gagcttcggagaagcagtggtggcttcccggtgggtcctgatccctcctgtcatgcagaa
atgtgcttcctctcttggttctgccacaacatgctgtctcctaacaaggattacgaggtc
acctggtacgcctcttggagcccttgcccagagtgtgcagggcaggtggccgagttcctg
gccaggcacagaaacgtgaggctcaccatgttcactgcacgcctctactacttctggaat
ccgggtttccagcaggggctccgcaggctgagtcaggaaggggcctccgtgctgatcatg
ccctatgaagattttaaatattgttgggataactttgtgtacaatgatggtcagacattc
aagccttggaagagacttcgantgcaactctctatccctgtacagaacgctacaggagat
tctccagtgaagggtctccctgggcctcccggtctggctgctctagcctcctgctcttcc
tgcgagggcctccaacccatcctggaccagctttgcttttgccgggtcatcctgagctcc
tcctgccctcaggcccattccacagtgctcactgcctcctcccagctctccccagctcct
cctgcagaggcccctttctgcctccatggctag
DBGET
integrated database retrieval system
