Callithrix jacchus (white-tufted-ear marmoset): 100399941
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Entry
100399941 CDS
T03264
Symbol
VDR
Name
(RefSeq) vitamin D3 receptor isoform X1
KO
K08539
vitamin D3 receptor
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04928
Parathyroid hormone synthesis, secretion and action
cjc04961
Endocrine and other factor-regulated calcium reabsorption
cjc04978
Mineral absorption
cjc05152
Tuberculosis
cjc05207
Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
100399941 (VDR)
09154 Digestive system
04978 Mineral absorption
100399941 (VDR)
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
100399941 (VDR)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
100399941 (VDR)
09171 Infectious disease: bacterial
05152 Tuberculosis
100399941 (VDR)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cjc01009
]
100399941 (VDR)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100399941 (VDR)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cjc03310
]
100399941 (VDR)
Protein phosphatases and associated proteins [BR:
cjc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100399941 (VDR)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100399941 (VDR)
Nuclear receptors [BR:
cjc03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
100399941 (VDR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100399941
NCBI-ProteinID:
XP_002752135
Ensembl:
ENSCJAG00000015018
LinkDB
All DBs
Position
9:complement(221567..284880)
Genome browser
AA seq
427 aa
AA seq
DB search
MEAMAASTSLPDPGDFDRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTC
PFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKDSL
RPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPIRVNDVGGSYPSRLNSRHTPSYSG
DSSSCCSDHCITSPDMMESSSFSNLDLSEEDSDDGSVTVDLSQLSMLPHLADLVSYSIQK
VIGFAKMIPGFRDLTSEDQIVLLKSSAIEVIMLRSNESFTTDDMSWTCGKQDYKYRVSDV
TKAGYNLELIEPLLKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAALIEAIQDRLS
NTLQTYIRCRHPPPGSHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPECSMKLTPLVLE
VFGSEIS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaatggcagccagcacttccctgcctgaccctggagactttgaccggaacgtg
ccccggatctgtggcgtgtgtggagaccgagccacgggcttccacttcaacgctatgacc
tgtgaaggctgcaaaggcttcttcaggcgaagcatgaaacggaaggcactgttcacctgc
cccttcaacggggactgccgcatcacgaaggacaaccggcgccactgccaggcctgccgg
ctcaaacgctgcgtggacatcggcatgatgaaggagtttatcctgacagatgaggaggtg
cagaggaagcgggagatgatcctgaaacggaaggaggaggaggccttgaaggacagtctg
cggcccaagctgtccgaggagcagcagcgcatcattgccatcctgctggatgcccaccat
aagacctatgaccccacctactctgacttctgccagttccggcctccgattcgtgtgaat
gatgttggagggagctatccttccaggctcaactcgagacacactcctagctactccggg
gactcctcctcctgctgctcagatcactgtatcacctctccagacatgatggaatcatcc
agcttctccaacctggatctgagtgaagaagattcagatgatggttctgtgaccgtggac
ctgtcccagctatccatgctgccccatctggctgacctggtcagttacagtatccaaaag
gtcattggctttgctaagatgatcccaggattcagagacctcacctctgaggaccagatc
gtgctgctgaagtccagtgccatcgaggtcatcatgttgcgctccaatgagtccttcacc
acagacgacatgtcctggacctgcggcaaacaagactacaagtatcgcgtcagtgatgtg
accaaagcaggatacaacctggagctgattgagcccctcctcaagttccaggtagggctg
aagaagctgaacttgcatgaggaggagcatgtcctgctcatggccatctgcatcgtttcc
ccagatcgtcccggggtgcaggacgccgcgctgattgaggccatccaggaccgcctgtcc
aacacgctacagacctacatccgctgccgccacccgcccccaggcagccacctgctctat
gccaagatgatccagaagctggccgacctgcgcagcctcaacgaggaacactccaagcag
taccgctgcctctccttccagcccgagtgcagcatgaagctcacgccccttgtgctggag
gtgttcggcagtgagatctcctga
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