KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100404409
Entry
100404409         CDS       T03264                                 
Name
(RefSeq) actin, cytoplasmic 1-like
  KO
K05692  actin beta/gamma 1
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03082  ATP-dependent chromatin remodeling
cjc04015  Rap1 signaling pathway
cjc04145  Phagosome
cjc04210  Apoptosis
cjc04390  Hippo signaling pathway
cjc04510  Focal adhesion
cjc04520  Adherens junction
cjc04530  Tight junction
cjc04611  Platelet activation
cjc04613  Neutrophil extracellular trap formation
cjc04670  Leukocyte transendothelial migration
cjc04714  Thermogenesis
cjc04810  Regulation of actin cytoskeleton
cjc04814  Motor proteins
cjc04820  Cytoskeleton in muscle cells
cjc04919  Thyroid hormone signaling pathway
cjc04921  Oxytocin signaling pathway
cjc04971  Gastric acid secretion
cjc05014  Amyotrophic lateral sclerosis
cjc05100  Bacterial invasion of epithelial cells
cjc05132  Salmonella infection
cjc05135  Yersinia infection
cjc05164  Influenza A
cjc05205  Proteoglycans in cancer
cjc05225  Hepatocellular carcinoma
cjc05410  Hypertrophic cardiomyopathy
cjc05412  Arrhythmogenic right ventricular cardiomyopathy
cjc05414  Dilated cardiomyopathy
cjc05416  Viral myocarditis
cjc05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100404409
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    100404409
   04390 Hippo signaling pathway
    100404409
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100404409
  09143 Cell growth and death
   04210 Apoptosis
    100404409
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100404409
   04520 Adherens junction
    100404409
   04530 Tight junction
    100404409
  09142 Cell motility
   04814 Motor proteins
    100404409
   04820 Cytoskeleton in muscle cells
    100404409
   04810 Regulation of actin cytoskeleton
    100404409
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    100404409
   04613 Neutrophil extracellular trap formation
    100404409
   04670 Leukocyte transendothelial migration
    100404409
  09152 Endocrine system
   04921 Oxytocin signaling pathway
    100404409
   04919 Thyroid hormone signaling pathway
    100404409
  09154 Digestive system
   04971 Gastric acid secretion
    100404409
  09159 Environmental adaptation
   04714 Thermogenesis
    100404409
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    100404409
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    100404409
  09172 Infectious disease: viral
   05164 Influenza A
    100404409
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100404409
   05135 Yersinia infection
    100404409
   05100 Bacterial invasion of epithelial cells
    100404409
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100404409
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    100404409
   05410 Hypertrophic cardiomyopathy
    100404409
   05412 Arrhythmogenic right ventricular cardiomyopathy
    100404409
   05414 Dilated cardiomyopathy
    100404409
   05416 Viral myocarditis
    100404409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cjc03021]
    100404409
   03019 Messenger RNA biogenesis [BR:cjc03019]
    100404409
   03036 Chromosome and associated proteins [BR:cjc03036]
    100404409
   03029 Mitochondrial biogenesis [BR:cjc03029]
    100404409
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cjc04812]
    100404409
   04147 Exosome [BR:cjc04147]
    100404409
Transcription machinery [BR:cjc03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     100404409
Messenger RNA biogenesis [BR:cjc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     100404409
Chromosome and associated proteins [BR:cjc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     100404409
    NuA4 complex
     100404409
  Chromatin remodeling factors
   BAF complex
    100404409
   PBAF complex
    100404409
   GBAF(ncBAF) complex
    100404409
   SWR1 complex
    100404409
Mitochondrial biogenesis [BR:cjc03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    100404409
Cytoskeleton proteins [BR:cjc04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     100404409
Exosome [BR:cjc04147]
 Exosomal proteins
  Proteins found in most exosomes
   100404409
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 100404409
NCBI-ProteinID: XP_002749016
UniProt: F6TFX6
LinkDB
Position
X:68617972..68621191
AA seq 375 aa
MDDDIAALVVDNGSGMCKPGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILHLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIDNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALARSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggatgatgatatcgctgcacttgttgtcgacaacggctccggcatgtgcaagcccggc
ttcgcgggcaacgatgctccccgggccgtcttcccctctatcgtggggcgccccaggcac
cagggcgtgatggtgggcatgggtcagaaggactcctacgtgggtgacgaggcccagagc
aagagaggcatcctgaccctgaagtaccccatcgagcatggcattgtcaccaactgggac
gacatggagaagatctggcaccacactttttacaacgagctgcgtgtggctcctgaggag
caccccgtgctgcttactgaggcccccctgaaccccaaggccaaccgtgagaagatgacc
cagatcatgtttgagaccttcaacaccccagccatgtatgtggccatccaggctgtgctt
tccttgtacgcctctggccgtaccactggcatcgtgatggactccggtgacggagtcacc
cacactgtgcccatctatgaggggtatgccctcccccacgccatcctacatctggacctg
gctggccgggacctgactgactacctcatgaagatcctcaccgagcgcggctacagcttc
accaccacagctgagcgggaaatcgtgcgtgacatcaaggagaagctgtgctacgtcgcc
ctggacttcgagcaggagatggccacggcggcctccagctcctccctggagaagagctat
gagctgcccgatggtcaggtcatcaccatcgacaacgagcggttccgctgccctgaggca
ctcttccagccttctttcctgggcatggaatcttgtggcatccacgaaactacctttaac
tccatcatgaaatgtgacgtggacatccgcaaagacctgtatgccaacacagtgctgtct
ggtggtaccaccatgtaccctggcatcgctgacaggatgcagaaggagatcaccgccctg
gcacgcagcacaatgaagatcaagatcattgctcctcccgagcgcaagtactcagtgtgg
attggtggctccatcctggcctcgctgtccaccttccagcagatgtggatcagcaagcag
gagtatgatgagtccggcccctccatcgtccaccgcaaatgcttctag

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