Callithrix jacchus (white-tufted-ear marmoset): 100404471
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Entry
100404471 CDS
T03264
Symbol
LTBP1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100404471 (LTBP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
100404471 (LTBP1)
Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
100404471 (LTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
EGF_TEN
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
100404471
NCBI-ProteinID:
XP_008979139
Ensembl:
ENSCJAG00000003410
LinkDB
All DBs
Position
14:complement(79472602..79938794)
Genome browser
AA seq
1717 aa
AA seq
DB search
MAGAWLRWGLLLWAGLLASSAHGRVRRITYVVRPGPGLAAGALPLSGPPSPRTFNVALNA
RYSRSSASAGAPSRASLRVPSERTRRTSKPGGAALQGLRPPPPPEPARPEAPGGQLHPKP
GGHPAAAPFARQGREVVRSKVPLETQSGGGSRLQVHQKQQMQGVNVCGERCCRGWSKAPG
SQRCTKPSCVPPCQNGGICLRPQFCVCKPETKGKACETVAAQDTSLPLFGGQSPGAASSW
IPPEQAAKHTSSKKADTLPRVSPVAQMTFTLKPKPSVGLPQQIHSQVTPLSSQSMMIHHG
QTQEYVLKPKYFPAQKGISGEQSTEPSFPLRYVQDQVATPFQLSNHTGRIKVVFTPSICK
VTCTKGSCQNSCEKGNTTTLISENGHAADTLTATNFRVVICHLPCMNGGQCSSRDKCQCP
PNFTGKLCQIPVHGASVPKLYQHSQQPGKALGTHVIHSTHTLPLTVTSQQGVKVKFPPNI
VNIHVKHPPEASVQIHQVSRIDGPTGQKTKEAQPGHSQVSYQGLPAQKTQTIHSTHSHQH
VIPHVYPVAAKTQLGRCFQETVGSQCGKALPGLSKQEDCCGTVGTSWGFNKCQKCPKKPS
YHGYNQMMECLPGYKRVNNTFCQDINECQLQGVCPNGECLNTMGSYRCTCKIGFGPDPTF
SSCVPDPPVISEEKGPCFRLVSSGRQCMHPLSVHLTKQLCCCSVGKAWGPHCEKCPLPGT
AAFKEICPGGMGYTVSGVHRRRPIHHHVGKGPVFVKPKNTQPVAKSTHPPPLPAKEEPVE
ALTFSREHGPGVAEPEVATAPPEKEISSLDQEKTKLEPGQPQLSPGISTIHLNPQFPVVI
EKTSPPVPVEVAPEASTSSASQVIAPTQVTEINECTVNPDICGAGHCINLPVRYTCICYE
GYKFSEQQRKCVDIDECTQAQHLCSQGRCENTEGSFLCICPAGFMASEEGTDCIDVDECL
RPAICGEGRCVNTVGAFRCEYCDSGYRMTRRGHCEDIDECLNPSTCPDEQCVNSPGSYQC
VPCTEGFQGWNGQCLDVDECLEPNVCTNGDCSNLEGSYMCSCHKGYTRTPDQKHCKDIDE
CQQGNLCINGQCKNTEGSFRCTCGQGYQLSAAKDQCEDIDECQHRHLCAHGQCRNTEGSF
QCVCDQGYRASGLGDHCEDINECLEDKSVCQRGDCINTAGSYDCTCPDGFQLDDNKACQD
INECEHPGLCGPQGECLNTEGSFHCVCQQGFSISADGRTCEDIDECVNNTVCDSHGFCDN
TPGSFRCLCYQGFQAPQDGQGCVDVNECELLSGVCGEAFCENVEGSFLCVCADENQEYSP
MTGQCRSLASTDLDVDQPKEEKKECYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGDNC
EIFPCPVLGTAEFTEMCPKGKGFVPAGESSSEAGGENYKDADECLLFGQEICKDGFCLNT
RPGYECYCKQGTYYDPVKLQCFDMDECQDPNSCIDGQCVNTEGSYNCFCTHPMVLDASEK
RCIQPAESNEHLEEVDVHQDLCWEHLNDDYVCGRPLVGKQTTYTECCCLYGEAWGMQCAL
CPMKNSDDYAQLCNIPITGRRQPYGRDALVDFSEQYGPEANPYFIQDRFLNSFEELQAEE
CGILNGCENGRCVRVQEGYTCDCFDGYHLDTAKMTCVDVNECNELNNRMSLCKNAKCINT
EGSYKCLCLPGYVPSDKPNYCTPLNTALNLEKDSDLD
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggcctggctcaggtgggggctcctgctctgggcagggctgctcgcgtcgtcg
gcgcacggccgggtgcggaggatcacctacgtggtgcgcccgggccccggcctggcggcg
ggcgccttgcccctgagcgggcccccgagtccgcggaccttcaacgtcgcgctgaacgcc
aggtacagccgcagctcggcgtccgccggcgcccccagccgcgcctccctccgggtcccc
tcggagcggacccggcgcacaagcaagcccggcggcgcggccctgcaggggctccgaccg
ccgccgccgccggagccggcgcgtcccgaggcccccggcgggcagctccaccccaagccc
ggcggccaccctgcagccgccccgttcgccagacaaggcagggaagtcgtgcgctccaag
gtgccgctggagacccagagcggcgggggctccaggctgcaggttcaccagaagcagcag
atgcagggggtcaatgtttgtggagagcggtgctgtcgcggctggagtaaggcccctggc
tcccagaggtgcaccaaacctagctgtgttccaccatgtcagaatggaggaatatgtctc
cggcctcaattctgtgtgtgtaaaccggagaccaagggcaaagcctgtgaaacagtagct
gcccaggacacctcgttaccactctttggagggcagagtcctggggctgcctcctcctgg
atccctcctgagcaagcagcaaagcatacttcgtctaagaaggcagacactctcccaaga
gtcagccctgtggctcagatgaccttcaccctcaagccgaagccttcagtaggactcccc
cagcagatacattctcaagtgactcccctttcctcccagagcatgatgattcatcatggc
cagacccaagaatatgtgctgaagcccaagtactttccagcccaaaaggggatttcagga
gagcagtccaccgaaccttcgttccctttaagatacgtgcaggatcaagttgcgacacct
tttcagttgagtaaccacactggccgcatcaaggtggtctttactccgagcatctgtaaa
gtgacctgcaccaagggcagctgtcagaacagctgtgagaaggggaacaccaccactctc
attagtgagaatggtcacgctgccgacaccctgacagccacgaacttccgagtggttatt
tgccatcttccatgtatgaatggtggccagtgcagttcaagggacaaatgtcagtgccct
ccaaatttcacaggaaagctttgtcagatcccagtccatggtgccagtgtgcctaaactt
tatcagcattcccagcagccaggcaaggcgttggggacacatgtcattcattctacacat
accttgcctctgactgtgactagccagcaaggagtcaaagtgaaatttcctcctaacata
gtcaatatccatgtgaaacatcctcctgaggcttctgtccagatacatcaggtttcaaga
attgatggcccaacaggccagaagacaaaagaagctcaaccaggccattcccaagtctct
taccaagggcttcctgcgcagaagacccagaccatacattccacacactcccaccagcac
gtcattcctcacgtctaccctgtggctgctaagacacagcttggccggtgcttccaggaa
accgttgggtcacagtgtggcaaagcgctccctggcctttcaaagcaagaggactgctgt
ggaactgtgggtacctcctggggctttaacaaatgccagaaatgcccaaagaaaccatct
tatcatggatacaaccaaatgatggaatgcctaccgggttataagcgggttaacaacacc
ttttgccaagatattaatgaatgtcagctacaaggtgtatgccctaatggtgagtgtttg
aataccatgggcagctatcgatgtacctgcaaaataggatttgggccggatcctaccttt
tcaagttgtgttcctgatccccctgtgatctcagaagagaaagggccctgtttcagactt
gtcagttctggaagacaatgtatgcaccctctatctgttcacctcaccaagcagctttgc
tgttgtagtgtgggcaaggcctggggcccacactgtgagaaatgtccccttccaggcaca
gctgcttttaaggaaatctgtcctggtggaatgggttatacggtttctggcgttcataga
cgcaggccaatccatcaccatgtaggtaaaggacctgtatttgtcaagccaaagaacact
caacctgttgctaaaagtactcatcctccacctctcccagccaaggaagaaccagtggag
gccctgaccttctcccgggaacacgggccaggagtggcggagccagaagtggcaactgca
ccccctgaaaaggaaatatcttcactggatcaggagaaaaccaaacttgagcctggtcaa
ccccagctgtctccaggcatttcaacgattcatctgaatccacagtttccagtagtgatt
gaaaaaacatcacctcctgtgcctgttgaagtagctcctgaagcttccacatctagtgcc
agccaagtgatcgcacctactcaagtgacagaaatcaatgaatgtactgtgaaccctgat
atctgtggagcaggacactgcattaacctaccagtgagatatacctgtatatgctacgag
ggttacaagttcagtgaacaacagaggaaatgtgttgatattgatgagtgtactcaagcc
caacacctctgctcccagggccgctgtgaaaacaccgagggaagtttcttgtgcatttgc
ccagcaggatttatggctagtgaggagggcactgactgcatagatgttgacgagtgcctg
aggccggccatctgtggggaagggcgctgtgtcaatacggtgggggcgttccggtgtgaa
tactgcgacagcgggtaccgcatgacccggagaggccattgtgaggatattgatgaatgt
ttgaatccaagtacttgtccagatgagcagtgtgtgaattctccgggatcttaccagtgt
gttccttgcacagaaggattccaaggctggaatggacagtgcctagatgtggacgagtgc
ctggaaccaaacgtctgcacaaatggtgattgttccaaccttgaaggctcctacatgtgt
tcatgccacaaaggctatacccggactccagaccagaagcactgtaaagatattgatgaa
tgtcagcaagggaatctctgcataaatgggcagtgcaaaaataccgagggctccttcagg
tgcacctgtgggcaggggtaccagctgtcggcagctaaagaccagtgtgaagacattgat
gaatgccagcatcgtcatctctgtgctcatgggcagtgcaggaacactgagggctctttc
cagtgtgtgtgtgaccagggttacagagcttctgggcttggagaccactgtgaagatatc
aacgaatgtttggaggacaagagtgtttgccagagaggagactgcattaatactgcgggg
tcctatgattgtacttgtccggatggattccagctagacgacaataaagcatgtcaagat
attaatgaatgcgaacatccagggctctgtggtcctcaaggggagtgcctaaacacagag
ggctcttttcattgtgtctgccagcagggtttctcaatctctgcagatggccgtacatgt
gaagatattgatgaatgtgtaaacaacactgtgtgtgacagtcacgggttttgtgacaat
acacctggctccttccgctgcctctgttatcagggctttcaagccccacaggatgggcaa
gggtgtgtggatgtgaatgaatgtgaattgctcagtggagtgtgtggtgaagccttctgt
gaaaacgtggaagggtccttcctgtgcgtttgtgctgatgaaaaccaggagtacagcccc
atgactggtcagtgccgctccctggcctccacagatttagatgtggatcaacccaaagaa
gaaaagaaagaatgctactataatctcaatgatgccagtctctgtgataatgtgttggcc
cccaatgtcacgaaacaagaatgctgctgtacatcgggtgcgggatggggagataactgt
gaaatcttcccctgtccggtcttggggactgctgagttcactgaaatgtgtcctaaaggg
aaaggttttgtgcctgctggagaatcctcttctgaagctggtggtgagaactataaagat
gcagatgaatgcctgctttttggacaagaaatctgcaaagatggtttctgtttgaacact
cggcctgggtatgaatgctactgtaagcaagggacgtactatgatcctgttaaactgcag
tgctttgatatggatgaatgtcaggatccaaacagttgtattgatggccagtgtgttaat
acagagggctcttataactgcttctgtactcatcccatggtcctggatgcttcagaaaaa
agatgtatacaaccagctgagtcaaacgaacacttggaagaagttgatgtccaccaagat
ttgtgctgggaacatctgaatgatgattacgtgtgtggccggcctcttgtgggcaagcag
acaacatacactgagtgctgctgtctgtacggagaggcctggggcatgcagtgtgccctc
tgccctatgaagaactcagatgactatgctcagctgtgtaacatccccattacgggacgc
cggcagccatacggacgagacgccttggttgacttcagtgaacagtatggtccggaagcc
aatccctacttcatccaagaccgttttctaaatagctttgaggagttacaggctgaggaa
tgcggcatccttaatggatgtgaaaatggtcgctgtgtgagggtccaggaaggttacacc
tgtgattgctttgatgggtatcacttggatacagccaagatgacctgtgtcgatgtaaat
gaatgcaatgagttgaacaaccggatgtctctctgcaagaacgccaagtgcattaacacc
gaaggttcctacaagtgtttgtgtctgccaggctacgtaccttctgacaagccgaactac
tgcactccgttgaataccgccttgaatttagagaaagacagtgacctggattga
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integrated database retrieval system
