KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100405222
Entry
100405222         CDS       T03264                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DQ beta 2 chain isoform X1
  KO
K06752  MHC class II antigen
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04145  Phagosome
cjc04514  Cell adhesion molecules
cjc04612  Antigen processing and presentation
cjc04640  Hematopoietic cell lineage
cjc04658  Th1 and Th2 cell differentiation
cjc04659  Th17 cell differentiation
cjc04672  Intestinal immune network for IgA production
cjc04940  Type I diabetes mellitus
cjc05140  Leishmaniasis
cjc05145  Toxoplasmosis
cjc05150  Staphylococcus aureus infection
cjc05152  Tuberculosis
cjc05164  Influenza A
cjc05166  Human T-cell leukemia virus 1 infection
cjc05168  Herpes simplex virus 1 infection
cjc05169  Epstein-Barr virus infection
cjc05310  Asthma
cjc05320  Autoimmune thyroid disease
cjc05321  Inflammatory bowel disease
cjc05322  Systemic lupus erythematosus
cjc05323  Rheumatoid arthritis
cjc05330  Allograft rejection
cjc05332  Graft-versus-host disease
cjc05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100405222
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100405222
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    100405222
   04612 Antigen processing and presentation
    100405222
   04658 Th1 and Th2 cell differentiation
    100405222
   04659 Th17 cell differentiation
    100405222
   04672 Intestinal immune network for IgA production
    100405222
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100405222
   05164 Influenza A
    100405222
   05168 Herpes simplex virus 1 infection
    100405222
   05169 Epstein-Barr virus infection
    100405222
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    100405222
   05152 Tuberculosis
    100405222
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    100405222
   05140 Leishmaniasis
    100405222
  09163 Immune disease
   05310 Asthma
    100405222
   05322 Systemic lupus erythematosus
    100405222
   05323 Rheumatoid arthritis
    100405222
   05320 Autoimmune thyroid disease
    100405222
   05321 Inflammatory bowel disease
    100405222
   05330 Allograft rejection
    100405222
   05332 Graft-versus-host disease
    100405222
  09166 Cardiovascular disease
   05416 Viral myocarditis
    100405222
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    100405222
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cjc04147]
    100405222
Exosome [BR:cjc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100405222
  Exosomal proteins of epithelial cells
   100405222
  Exosomal proteins of breast milk
   100405222
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 C2-set_2 ig Marek_A MHC_I Ig_2 C2-set_3
Other DBs
NCBI-GeneID: 100405222
NCBI-ProteinID: XP_008992469
Ensembl: ENSCJAG00000021548
LinkDB
Position
4:complement(37057120..37066581)
AA seq 264 aa
MALQIPRGFRAAAVTLMLAMLSTPVADGRDSPKDFVVQFKGMCYFTNGTERVRGVARYIY
NREEYARFDSDVGEFRAVTELGRSTEDWNNYKDFLEQERAAVYTVCRHNYEAELRTTLQR
RVEPTVTISPTRTEALNHHNLLVCSVTDFYPGQIKVRWFRNDQEETAGIVSTSLIRNGDW
TFQILVMLEMTPQRGDIYTCHVEHPSLQSPITVEWRAHSESAQSKMLSGIGGFVLGLIFL
GLGLVIRHRGRKGPRGPPPAGLLH
NT seq 795 nt   +upstreamnt  +downstreamnt
atggctctgcagatccctagaggctttcgggcagcagctgtgaccttgatgctggcgatg
ctgagcaccccagtggctgatggcagagactctcccaaggatttcgtggtccagtttaag
ggcatgtgctacttcaccaacgggacggagcgcgtgcggggtgtggccagatacatctat
aaccgcgaggagtacgcgcgcttcgacagcgacgtgggggagttccgggcggtgaccgag
ctggggcggagcaccgaggactggaacaactataaggacttcttggagcaggagcgggcc
gcggtgtacacggtgtgcagacacaactacgaggcggagctccgcacgaccttgcagcgc
cgagtggagcctacagtgaccatctccccaaccaggacagaggccctcaaccaccacaac
ctgctggtctgctccgtgacagatttctatccaggccagatcaaagtccggtggtttcgg
aatgaccaggaggagacagccggcattgtgtccacctccctcattaggaatggtgactgg
acattccagattctggtgatgctggaaatgactccccagcgtggggacatctacacctgc
catgtggagcaccccagcctccagagccccatcaccgtggagtggcgggctcactccgaa
tctgcccagagcaagatgctgagtggaatcggaggctttgtgctggggctgatcttcctc
gggctgggccttgtcatccgtcacaggggtcggaaaggacctcgagggcctccccccgca
gggctcctgcactga

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