KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100409412
Entry
100409412         CDS       T03264                                 
Symbol
BDNF
Name
(RefSeq) brain-derived neurotrophic factor isoform X2
  KO
K04355  brain-derived neurotrophic factor
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04010  MAPK signaling pathway
cjc04014  Ras signaling pathway
cjc04024  cAMP signaling pathway
cjc04151  PI3K-Akt signaling pathway
cjc04722  Neurotrophin signaling pathway
cjc05016  Huntington disease
cjc05022  Pathways of neurodegeneration - multiple diseases
cjc05030  Cocaine addiction
cjc05034  Alcoholism
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100409412 (BDNF)
   04014 Ras signaling pathway
    100409412 (BDNF)
   04024 cAMP signaling pathway
    100409412 (BDNF)
   04151 PI3K-Akt signaling pathway
    100409412 (BDNF)
 09150 Organismal Systems
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    100409412 (BDNF)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100409412 (BDNF)
   05022 Pathways of neurodegeneration - multiple diseases
    100409412 (BDNF)
  09165 Substance dependence
   05030 Cocaine addiction
    100409412 (BDNF)
   05034 Alcoholism
    100409412 (BDNF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cjc04052]
    100409412 (BDNF)
Cytokines and neuropeptides [BR:cjc04052]
 Cytokines
  Growth factors (RTK binding)
   100409412 (BDNF)
SSDB
Motif
Pfam: NGF NTF3_N Spaetzle
Other DBs
NCBI-GeneID: 100409412
NCBI-ProteinID: XP_002755198
Ensembl: ENSCJAG00000006191
LinkDB
Position
11:complement(89764591..89830865)
AA seq 305 aa
MRLLNAAATAAVGPEGSSTATGTGAGRWSQNRNHDVTPPPGTRELCVDPEFHQVRRVMTI
LFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRSLTSSLADT
FEHVIEELLDEDQKVRPHEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAANM
SMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFY
ETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLT
IKRGR
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagattgttgaatgcagctgccaccgctgctgtggggccggaggggagcagcaccgcg
acggggaccggggctgggcgctggagccagaatcggaaccacgatgtgactccgccgccg
gggacccgtgagctttgtgtggaccccgagttccaccaggtgagaagagtgatgaccatc
cttttccttactatggttatttcatacttcggttgcatgaaggctgcccccatgaaagaa
gcaaacatccgaggacaaggtggcttggcctacccaggtgtgcggacccatgggactctg
gagagtgtgaatgggcccaaggcaggttcaagaagcctgacatcgtcattggctgacact
ttcgaacatgtgatagaagagctgttggatgaggaccagaaagttcgaccccatgaagaa
aacaataaggacgcagacttgtacacgtccagggtgatgctcagtagtcaagtgcctttg
gagcctcctcttctctttctgctggaggaatacaaaaattacctggatgctgcaaacatg
tccatgagggtccggcgccactctgaccctgcccgccgaggggagctgagcgtgtgtgac
agtattagtgagtgggtaacggcggcagacaaaaagactgcagtggacatgtcgggcggg
acggtcacagtccttgaaaaggtccctgtatcgaaaggccaactgaagcaatacttctac
gagaccaagtgcaatcccatgggttacacaaaagaaggctgcaggggcatagacaaaagg
cattggaactcccagtgccgaactacccagtcgtacgtgcgggcccttaccatggatagc
aaaaagagaattggttggcgattcataaggatagacacttcttgtgtatgtacattgacc
attaaaaggggaagatag

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