Callithrix jacchus (white-tufted-ear marmoset): 100412129
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Entry
100412129 CDS
T03264
Symbol
NLRP1
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100412129 (NLRP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100412129 (NLRP1)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cjc04054
]
100412129 (NLRP1)
Membrane trafficking [BR:
cjc04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
100412129 (NLRP1)
Pattern recognition receptors [BR:
cjc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100412129 (NLRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
PYRIN
CARD
NOD2_WH
LRR_6
AAA_16
Birna_VP5
NPHP3_N
NB-ARC
AAA_22
AAA_14
nSTAND3
AAA_5
AAA_30
SOTI
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
100412129
NCBI-ProteinID:
XP_054112192
LinkDB
All DBs
Position
5:complement(103106901..103168782)
Genome browser
AA seq
1447 aa
AA seq
DB search
MAGGAWGRLACYLELLEKEELKKFQFLLTNKVHSRGSSGETPAQPEKTSGMQVASHLVAQ
YGEQQAWDLAIHIWEQMGLRSLCAQAQEEAGHSLSFHYSLSEPSMGSPNQPTSTTVLRSQ
IPELHGCTQRSERSVSRRLPDTSGHQWREITSSLLYQAPLSSPDYGSPSYESPSAPISTA
ELGSWISPLQPSPVPREQEAPGTQWPLDETLGNYYTGIRERDQSLWRESPCSTWSWKNED
LNQKFTQLLLLQRPHPRSHECLVGGRLLHNVEENQGHLIEIGDLFGPGLDTQEPHIVILQ
GAAGIGKSTLARRVREAWGRGQLYRDCFQHVFYFSCRELAQSKVLSLAELIEKDWTATQA
PIRQILSRPERLLFILDGVDEPKWVLEEQSSELCLHWSQPQPADALLGSLLGKTILPKAS
FLITARTTALQHLIPSLEQARWVEVLGFSESSRKEYFYKYFTDEMQASRAFRLVKSNKEL
WALCLVPWVSWLACTCLMQQMKQKEELTLTSKTTTTLCLHYFSQALQAQPLGSQLQGFCS
LAAEGTWQRKTLFSPDDLKKHGLDGAIISSLLKMDILQEHPIPLSYSFIHLCFQEFFAAM
SCALEDKKGRGEHSNHIMGLGKLLEAYGTHDLLRAPTTRFLLGLLSEQGAREMENIFDCR
LSRERKKRLLQCAQFLQPPLQSHSLEFLHCLYETQDKSFLTQMMAHFQEVCMCVETDMEL
LVCTFCIKFCHNVKKLQLIEGRQHGPARSLDRVVLFRWVPATDAYWQILFSVLKVTRSLK
ELDLSGNLLSLSAVQSLCETLKYPRCLLETLRLAGCGLTAEGCKDLASGLRTNQTLTEVE
LSFNVLTDAGAKHLCQGLRWPTCKLQRLQLVSCGLTSGCCRALASVLSASPSLTDLDLQQ
NDLDDVGVQLLCKGLRRPTCKLTRLGLDQTTLSNETRQELRALEQEKSQLLLFYTRKPSA
MIPNEGLDIGDMSNSTSSLKRQRLRSETESSYVAQADLKPLDWSNPPAKAFHSAGMTSKS
HESVPRIAQQELAYLPSPASQEDLHTKPLGNDDDFWGPTGPVATEVVDKERSLYRVHFPV
AGTYRWPNMGLCFVVREAVTTEIEFCVWDKLLGEINQQQSWMVAGPLLDIKAEPEAIKAV
HLPHFVSLQGGHMDTSLFQVAHFKEEGMLLEKPAKVELHHIVLEDPSFSPIGVLLRVIHN
ALRIFPITSMVLLYHRIHPEEVTFHLYLIPSDCSIRKAIDDEEMKFQFVRLHKPPPLTPL
YMGSRYAVSGSEELEIIPEELELCYRSPGEPQLFSEFYVGHLGSGIRLQMKNKTDETLVW
EALVKPGDLTPATTLVPPAPKALPSPLDAPGLLHFVDQYREQLVARVTSVEPVLDNLLGH
VLSQEQYERVLAEDTRPSKMRKLFSFSRSWDRSCKDRLYQALKDTHPYLIMELWEKGSKK
GLLPLSI
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggctggtggagcctggggccgcctggcctgttacttggagctcctggagaaggaggag
ctgaagaagttccagtttctgctgaccaataaagtgcactccaggggctcttcaggtgag
acacctgctcaaccagagaagacaagtggcatgcaggtggcctcacacctggtggctcag
tatggggagcagcaggcctgggacctggccatccatatctgggaacagatgggcctgagg
tcactgtgtgcccaagctcaggaagaggcaggccactctctctcattccactacagccta
agtgaacccagcatggggtctcccaaccaacccacctccaccacagtgctgaggtcccag
atccctgaattgcatgggtgcacccagcgctcagagagaagcgtttcgagacgcctacct
gacacgtctggacaccaatggagagaaatcacttcctcactcctttaccaagctccttta
agctctccagactatgggtctccaagctatgagtcacccagtgcccccatatctacagca
gagctggggagctggatatccccacttcagcccagcccagtgcccagagagcaggaggct
cctggtacccagtggcctctggatgaaacgttgggaaattactacacaggaatcagagaa
agagaccagagcctgtggagggagagtccctgttccacatggtcctggaaaaatgaggat
ttgaaccaaaaatttacacagctgctacttctacaaaggcctcaccccagaagccatgag
tgcctggtcgggggaagattgcttcataatgtggaggagaatcaaggacatttaattgag
atcggagatttatttggcccaggcctggatacccaggaacctcatatagtcatactgcag
ggggctgctggaattgggaagtcaacactggccaggcgggtgagggaggcctgggggaga
ggccagctgtatagggattgcttccaacatgtcttctacttcagctgcagagagctggcc
cagtccaaggtgctgagtcttgctgagctcattgaaaaagactggacagccactcaggct
cccattagacagatcctgtctaggccagagcggctgctcttcatcctcgatggtgtggat
gagccaaaatgggtcttggaggagcagagttccgagctctgtctgcattggagccagccg
cagccagcagatgcactgctggggagtttgctggggaaaaccatacttcccaaggcatcc
ttcctgattactgctcggaccacagctctgcagcatctcattccttctttggagcaggca
cgttgggtagaggtcctggggttctctgagtccagcaggaaggaatatttctacaaatat
ttcacagatgaaatgcaagcaagtagagcctttaggttggtcaaatcgaacaaagaactc
tgggccctgtgtcttgtgccctgggtgtcctggctggcctgcacttgcctgatgcagcag
atgaagcagaaggaagaactcacactgacctccaagaccaccacgaccctctgtctgcat
tacttttcccaggctctccaagctcagccattggggtcccagctccagggcttctgctcc
ctggctgctgagggcacctggcaaagaaagaccctcttcagtccagatgacctcaagaag
catgggttagatggggccatcatctcctccctcttgaagatggatattcttcaagagcac
cccatccctctgagctacagcttcattcacctctgtttccaggagttctttgcagcaatg
tcctgtgccttggaggataagaaggggagaggtgaacattctaatcacatcatgggtttg
ggaaagttgctagaagcatatggaacacatgacctgttgagggcaccaaccacacgtttc
ctattgggcctgttaagtgaacagggggcaagagagatggagaacatcttcgactgccgg
ctgtctcgggagagaaagaagaggcttctgcagtgcgcccagttcctgcagcccccactg
cagtcacactctctggagttcctccactgtttatatgagactcaggacaaaagtttcctg
acacaaatgatggcccatttccaagaagtgtgcatgtgtgtggaaacagacatggagctc
ctggtgtgcactttctgcattaaattctgccacaacgtgaagaagcttcaactgattgag
ggcaggcagcatggaccagcaaggagccttgacagggtagtcctgttcaggtgggtccca
gccacagatgcctattggcagattctcttctccgttctcaaggtcaccagaagcctgaag
gagctggacctaagtggaaacttgcttagcctctctgcagtgcagagtctttgtgagacc
ctgaaataccctcgctgcctcctggagaccctacggttggccggctgtggcctcacggct
gagggctgcaaggaccttgcctctgggctgagaacaaaccagaccctgaccgaggtggag
ctgagcttcaatgtgctcacagatgctggagccaaacacctttgccagggactgagatgg
ccaacctgcaagctacagcgactgcagctggtcagctgtggcctcacgtctggctgctgc
cgagccctggcatctgtgcttagcgccagccccagcctgacggacctagacctgcagcag
aatgacctggatgatgtcggcgtgcagctgctctgtaagggactcaggcgtcctacctgc
aaactcacacgcctggggctggaccagacaactctgagcaatgagaccaggcaggagctg
agagccctggagcaggagaagtcccagctgctcttgttctacacacggaaaccaagtgcg
atgatccctaatgagggcctggatataggagacatgagtaacagcacatcctcactcaag
cgacagagactcagatcagagacggagtcttcctatgttgctcaggctgatctcaaaccc
ttggactggagcaatcctcccgctaaggcctttcacagtgctgggatgacgagcaagagc
cacgagagcgtcccaaggatagcacagcaggaactcgcctacttgccatctcctgcctct
caggaggacctgcatacgaaacctttggggaatgatgatgacttctggggccccacaggg
cctgtggctactgaggtagttgacaaagaaaggagcctgtaccgagttcacttccctgtg
gctggcacctaccgctggcccaacatgggtctctgctttgtggtgagagaagctgttacc
actgaaattgaattctgtgtgtgggataagctcctgggtgagatcaaccaacagcaaagc
tggatggtggcagggcctctgttggacatcaaggctgagcctgaagccatcaaagctgtg
cacctccctcactttgtgtctctccaagggggccacatggatacatccctattccaagtg
gcccactttaaagaagaggggatgctcctggagaagccagccaaggtggagctgcatcac
atagttctggaagaccccagcttctcccccatcggagtcctcctaagagtgatccataat
gcccttcgcatctttcccatcacctccatggtgctgctctaccaccgcatccatcctgag
gaagtcaccttccacctgtacctgatcccaagtgactgctccattcggaaggccatagat
gatgaagaaatgaagttccagtttgtgcgactacacaagccacccccgctgaccccactt
tatatgggctctcgttatgctgtgtctggttcagaggagctggaaataatccccgaggaa
ctggagctctgctatcgaagccctggagaaccccagctgttctctgagttctatgttggc
cacttgggatcagggatcaggctgcaaatgaaaaacaagacagatgagactttggtgtgg
gaggccttggtgaaaccaggagatctcacaccggcaactactctggtccctccagccccc
aaagccttaccttcccctctggatgccccggggttgctgcacttcgtggaccagtatcga
gagcagctggtagcccgagtgacatcagtggaacctgtcttggacaacctgcttggacat
gtgctgagccaggagcagtacgagagggtgctggctgaggacaccaggcccagcaagatg
cggaagctgttcagcttcagccggtcctgggacagaagctgcaaagatcgactctaccaa
gccctgaaggacacccatccttacctcattatggaactatgggagaagggcagcaaaaag
ggactcctgccactcagcatctga
DBGET
integrated database retrieval system
