KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100413502
Entry
100413502         CDS       T03264                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3G-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03250  Viral life cycle - HIV-1
cjc05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100413502
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100413502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjc03019]
    100413502
Messenger RNA biogenesis [BR:cjc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100413502
SSDB
Motif
Pfam: NAD2 APOBEC2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 DUF2162
Other DBs
NCBI-GeneID: 100413502
NCBI-ProteinID: XP_035132039
UniProt: F7CUA6
LinkDB
Position
15:53339103..53349359
AA seq 390 aa
MVGTSWPQMKPQTRNMVVRMDPDTFFYNFYNRPILLHWNTVRLCYEVKMKTNDCSRPPLV
AKILQGQVYSMPQHNPEMRFLHWFRKWKLHSDQEYEVTWFVSWSPCPVCARNVAEFLAED
RKVTLTIFVARLYYFWDLHYQEELHRLCQRRDSPHATMKIMSYGEFQHCWDKFMDNQRLY
KPWNKLTKHYTVLRIILGEVLGHLMDPVTFTYNFTNDPSVFGQHQTYLCYEVEHLHNGTW
VLLHQHRGFILNQASNNPGFPEGRHAELCLLDLISFWKLDLAQYYTVTCFISWSPCFSCA
EKVAEFLQENPHVNLHIFAAHIYGYQQGYIKGLCRLNRAGAPISMMKYSEFSYCWDTFVD
HQEHPFQPWEGLDEYTQALSGKLQAILQGN
NT seq 1173 nt   +upstreamnt  +downstreamnt
atggttgggactagctggccacagatgaagcctcagaccagaaacatggtggtgcgaatg
gatccagacacattcttctacaacttttataatagacccatccttttgcattggaacact
gtccggctgtgctatgaagtgaaaatgaaaacaaacgactgctcgaggccgcctttggtt
gcaaagatcttgcaaggccaggtctattcgatgcctcaacacaacccagagatgagattt
ctccattggttccgaaagtggaagctgcatagtgaccaggagtacgaggtcacctggttt
gtgtcctggagcccctgcccagtgtgtgcaaggaatgtagctgagttcctggccgaggac
aggaaggtcaccctgaccatcttcgtggcccgcctctattacttctgggacctacattac
caggaagagcttcacagactgtgtcagagaagagacagtccgcatgccaccatgaagatc
atgagttatggtgaatttcaacactgttgggacaagttcatggacaaccaaagattgtac
aagccttggaataagctgactaaacattatacagtgctgcgcattatactgggggaggtt
ctcggacacctgatggatccagtcacattcacttacaactttaccaatgacccttcggtc
tttggacagcaccagacctacctgtgttatgaggtggagcacctgcacaatggcacctgg
gtcctgctgcaccagcacaggggcttcatactcaaccaggcttcaaataatccaggtttc
cctgaaggccgccatgcagagctgtgcctcctggacctgatttccttttggaagctggac
ctggcccagtactacacagtcacctgcttcatctcctggagcccctgcttcagctgtgct
gagaaggtggctgaattccttcaagagaacccacacgtgaacctgcacatctttgctgcc
cacatctatggctatcaacaaggatatataaagggcctgtgcaggctgaacagagctggg
gccccaatttctatgatgaaatatagtgagtttagttactgctgggacacctttgtggat
caccaggaacaccccttccagccctgggagggactagatgagtacacccaagccctgagt
gggaagctgcaggccattctccagggaaactga

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