Callithrix jacchus (white-tufted-ear marmoset): 100413847
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Entry
100413847 CDS
T03264
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100413847 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cjc01007
]
100413847 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjc03016
]
100413847 (IARS1)
Enzymes [BR:
cjc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
100413847 (IARS1)
Amino acid related enzymes [BR:
cjc01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100413847 (IARS1)
Transfer RNA biogenesis [BR:
cjc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
100413847 (IARS1)
Prokaryotic type
Other AARSs
100413847 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
100413847
NCBI-ProteinID:
XP_035157144
Ensembl:
ENSCJAG00000020465
LinkDB
All DBs
Position
1:80316943..80401190
Genome browser
AA seq
1262 aa
AA seq
DB search
MVQQVPENINFPAEEEKILEFWTKFNCFQECLKQSKHKPKFTFYDGPPFATGLPHYGHIL
AGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIRGPEDVAKMGIAEYNSQC
RAIVMRYSTEWKSTVTRLGRWIDFDNDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVFVTFPLEEDETVSLVAWTTTPWTLPSNLAVCVNP
EMQYVKIKDVARGKLLILMEARLSALYKLESDYEILERFPGTYLKGKKYRPLFDYFVKCK
ENGAFTVLVDNYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIRKDSLPVCPVDASGCFTA
EVTHFAGQYVKDADKSIIRTLKEQGRLLVATTFTHSYPFCWRSDTPLIYKAVPSWFVRVE
NMVDQLLRNNDLSYWVPEFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFMEVVC
IGSMAELEELSGAKISDLHRESVDHLTIPSRCGKGSLHRISEVFDCWFESGSMPYAQVHY
PFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATALFGQPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAY
RFFIQNIVRLQKEEEIEFLYNENTVRKSPNVTDQWILSFMQSLIDFFATEMAAYRLYTVV
PRLVKFVDTLTNWYVRMNRRRLKGENGVEDCVTALETLFSVLLSLCRLMAPYIPFLTELM
YQNLKVLIDPVSVQDKDTLSIHYLMLPRVREELIDKKIESAISRMQSVIELGRVIRDRKT
IPIKYPLKEIVVIHQDPEALKDIKSLEKYVIEELNVRKVTLSTDKNKYGIRLRAEPDHMV
LGKRLKGAFKAVMTSIKQLSSEELEQFQKTGTIVVEGHELHDEDIRLMYTFDQATGGTAQ
FEAHSDAQALVLLDVTPDQSMVDEGMAREVINRIQKLRKKCHLVPTDEITVYYNAKSEGR
YLNNIIESHTEFIFATIKAPLKPYPVPPPDEILIQEKTQLKGSELEITLTRGSSLPGPAC
AYVNLNICANGSEQGGVLLLENPKGDNRLDLLKLKSVVSSIFGVRKTDLAVFHNETEIQN
QTDLLGLSGKTLCVTAGLAPSPINSSSTLLCQYVNLQLLNAEPQECLMGTVGTLLLENPL
GQNGLTHKGLLYEAAKVFGLRSRKLKLFLNETQTQEITEDIPMKTLNMKTVYVSVLQTTA
DF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacaagttccagaaaacataaattttcctgctgaagaagaaaaaatcttggag
ttttggactaaatttaattgttttcaggaatgcttaaagcaatcgaaacataaaccaaaa
tttactttctatgatggtcctccttttgcaactggactgcctcattatggacatatactt
gcagggacaattaaagatatagttacaagatatgctcaccagagtgggtttcatgttgac
agaagatttggatgggattgtcatggcttacctgtggaatatgaaattgataagacacta
ggaatcagaggaccagaggatgtggccaaaatggggattgcagagtataacagtcagtgc
cgagcaattgtgatgagatattctactgagtggaagtctaccgttaccagacttggccgg
tggattgactttgacaatgactacaaaactctttatccagaattcatggaaagtgtctgg
tgggtcttcaaacaactctatgataaaggccttgtttatagaggtgtgaaagtcatgccc
ttctctactgcatgtaacactccactttccaactttgagtcacaccagaattataaggat
gttcaagacccttcagtatttgtaactttccctttggaagaagatgaaactgtatcttta
gttgcttggacaaccactccctggactctacctagtaaccttgccgtctgtgttaatcca
gaaatgcaatacgtgaagattaaagatgttgccagaggaaaattgctcattttaatggaa
gccagattgtcagccctctataaattggagagtgactatgagatccttgaaagatttcct
ggtacctatcttaaaggcaagaagtacaggcccttgtttgactattttgtgaagtgtaaa
gagaatggcgctttcactgtactcgtagacaactatgtgaaggaagaagaaggcacaggg
gttgtccaccaagctccttactttggtgctgatgactatcgggtctgtatggacttcaac
attattcggaaagactcactccccgtttgccctgtggatgcatcaggctgcttcacagca
gaggtgacacattttgcaggacagtatgtgaaggatgctgacaaaagtatcatcaggact
ttgaaggaacaaggccgacttctggttgccaccaccttcactcacagctaccctttttgc
tggagatcagacactcccctcatttacaaagcggtgcccagctggtttgtgcgagtggag
aacatggtggaccagctcctaaggaacaatgacctgtcttactgggtcccagagtttgtg
cgagaaaaacgatttggaaattggctgaaagatgcacgtgactgggcaatttccagaaac
agatactggggcacccctatcccactgtgggtcagcgatgactttatggaggtagtatgc
attgggtcaatggcagaacttgaagaactctcgggagcaaagatctcagatctccacaga
gagagcgttgaccacctgaccattccttcacgctgtgggaagggatccttgcaccgcatc
tctgaagtgtttgactgttggtttgagagtggcagcatgccctatgctcaggttcattat
ccatttgaaaacaagagggagtttgaggatgcttttcctgcagacttcattgctgagggc
atcgaccaaaccagaggatggttttataccctgctggtgctggccacagccctcttcgga
caaccgcctttcaagaatgtaattgtgaatgggctcgtcctggcaagtgatggccaaaaa
atgagcaaacggaaaaagaattatccagatccagtttccattatccagaagtatggtgct
gatgcgctcagattgtatctgattaactcccctgtggtgagagcagaaaacctccgcttt
aaagaggagggtgtgcgggacgtccttaaggacgtactgctcccatggtacaatgcctac
cgcttcttcatccagaacattgtgaggcttcagaaggaagaagaaatagaatttctctac
aatgagaacacagttagaaaaagccccaacgttacagaccagtggatcctgtccttcatg
cagtctctcattgacttctttgcgactgaaatggcagcttataggctttacactgtggtg
cctcgccttgtcaagtttgtagatactctcaccaattggtatgttcgaatgaaccgcaga
agattaaagggtgaaaacggggtggaagattgtgtcacggccctagaaaccttgtttagt
gttctgctttctctttgcagacttatggctccctacataccttttctcactgaattgatg
taccagaatctaaaggtgctgatcgaccctgtttctgttcaagacaaggacacactcagc
atccactacctcatgctgccccgtgttcgagaagaattgattgataagaaaatagagagt
gcaatatctcggatgcagtctgtgattgaacttggacgagtgatcagagaccgcaaaact
attcccataaagtatcctttgaaagaaattgtggttatccatcaagatccagaagctctt
aaagatatcaagtctttggagaagtatgtcattgaggaattaaatgttcgaaaagttaca
ctgtctacagataaaaacaagtatggcattcggctaagggcagaaccagatcacatggtc
ctggggaagcgtctgaagggagcctttaaggcagtgatgacgtccatcaagcagctgagc
agtgaggagctggagcagttccaaaagactgggaccattgttgtggaaggccacgaattg
catgatgaagacatccgcctcatgtacacctttgatcaggccacaggtgggactgcacaa
tttgaagcacactcagatgctcaggctttggtcctcttagatgtcactcctgaccagtca
atggtggatgaaggaatggctcgggaagtcatcaatcgcatacagaaacttcgcaaaaag
tgccatctggttccaactgatgaaatcacagtgtattacaacgcgaagtctgaaggaaga
tatctgaataacattattgaaagccacacagagttcatatttgccaccataaaggctccc
ttaaaaccatatccagttcctccaccagatgaaatccttattcaagaaaaaacacagttg
aagggatctgaactggaaattacacttaccagaggatcttcccttcctggtcctgcttgt
gcttatgtcaatcttaacatttgtgcaaatggcagtgaacaaggcggagtattgcttctg
gaaaatccaaaaggtgataataggttggaccttttaaaactgaagagtgtcgtcagtagc
atttttggtgtgagaaaaacagacctggctgtcttccataatgaaacagaaatacaaaac
caaaccgacttactgggtcttagtggaaaaacactgtgtgtgactgcaggattggctccc
tctccgatcaacagttccagtactcttctttgtcagtatgtcaacctgcagctcctgaat
gcagagccacaagagtgtttaatggggacagtgggtactctactccttgaaaacccactt
gggcagaatggactcacccacaaaggccttctatatgaagcagccaaggtgtttggcctt
cggagcagaaagctaaagctatttctgaatgagacccaaacgcaagaaattacagaagac
atccccatgaagactttgaatatgaagactgtgtatgtttctgtattacaaacaacagca
gacttctag
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integrated database retrieval system
