Entry |
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Symbol |
SCN4A
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Name |
(RefSeq) sodium channel protein type 4 subunit alpha
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KO |
K04837 | voltage-gated sodium channel type IV alpha |
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Organism |
cjc Callithrix jacchus (white-tufted-ear marmoset)
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Brite |
KEGG Orthology (KO) [BR:cjc00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:cjc04040]
100414137 (SCN4A)
Ion channels [BR:cjc04040]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100414137 (SCN4A)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
5:complement(85215590..85267457)
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AA seq |
1835 aa
MARPSLATVVPLGPECLRPFTRESLAAIEQRVVEEEARLQRNKQMEIEEPERKPRSDLEA
GKNLPMIYGDPPPEAIGIPLEDLDPYYCDKKTFIVLNKGKAIFRFSATPALYMLSPFSMV
RRGAIKVLIHALFSMFIMITILTNCVFMTMSNPPPWSKNVEYTFTGIYTFESLIKILARG
FCVDDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRHKCVRWPPPFNDTNTTWYSNDSW
YGNDTWYGDAMWHTNDSWYANDTWNSHASWATNDTFDWDAYINDEGNFYFLEGSNDALLC
GNSSDAGHCPEGYECIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAG
KTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDKEKEEEFQQMLEKFKKHQE
ELEKAKAAQALEGGEADGDPAHGKDCNGSLDTSPGEKEAPRQSGSGDSGISDAMEELEEA
HQKCPPWWYKCAHKVLIWNCCAPWVKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHY
PMTEHFDNVLTVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSIIVTLSLVELGLA
NVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ
LFGKSYKECVCKIASDCSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLT
VFLMVMVIGNLVVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGISFAKAFL
LGLLHGKILSAKDIMLSLGEPIGAGEAGEAGETAPEDEKKEPPEEDLKKDNHILNHVGLA
DGPPSSIELDHLNFINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDGKKPPQPLYDG
NSSVCSTADYKPPEEDPEEQAEENPEEQPEECFTEACVQRWPCLYVDISQGRGKKWWTLR
RACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIMEML
LKWVAYGFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALS
RFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDIS
EVNNKSECESLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEE
QPQYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPQNKIQAMVYDLVTKQVFDITIMILICLNMVTMMVETDDQSQLK
VDILYNINMIFIIIFTGECVLKMLALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYF
VSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGM
SNFAYVKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPSLENPG
TSIKGDCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFY
ETWEKFDPDATQFIAYNRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILF
ALTKEVLGDSGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRAYRRH
LLQRSMKQASYMYRHSHDGSGDDAPEKEGLLANTMGKMYGHENRNSSSQSPEEKGKAGDA
GPAMGLIPISPSDTAQPPEPLPGQTVRSGVKESLV |
NT seq |
5508 nt +upstreamnt +downstreamnt
atggccagaccgtctcttgccaccgtggtgcctctgggccctgagtgcctgcgccccttt
acccgggagtccctggcagccatagaacagcgggtggtggaggaggaggcccggctgcag
cggaacaagcagatggagattgaggagcccgaacggaagcctcgaagtgacttggaggct
ggcaagaacctgcccatgatctatggagaccccccgccagaggccatcggcatccccctg
gaggacctggatccctactactgcgacaagaagaccttcatcgttctcaacaagggcaag
gccatcttccgcttctccgccacacccgctctctacatgctgagccccttcagcatggtc
aggcgaggggccatcaaggtgctcatccacgcgctgttcagcatgttcatcatgatcacc
atcttgaccaactgtgtgttcatgaccatgagtaacccgcctccctggtccaagaatgtg
gagtacaccttcacagggatctatacctttgagtccctcatcaagatactggcccggggc
ttctgtgtcgatgacttcacattcctccgggacccctggaattggctggacttcagcgtc
atcatgatggcgtacctgacagagtttgtggacttgggcaacatctcagccctgaggacc
ttccgggtgctgcgggccctcaaaaccatcacagtcatcccagggctgaagacgattgtg
ggggccctgatccagtctgtgaaaaagctgtcagatgtgatgatcctcactgtcttctgc
ctgagcgtctttgcgctggtggggttgcagctcttcatgggaaacctgaggcacaagtgt
gtgcgctggcccccgccgttcaacgacaccaacaccacatggtacagcaatgactcgtgg
tacggtaacgacacgtggtatggtgatgcaatgtggcacaccaatgactcatggtatgcc
aacgacacgtggaacagccatgcaagctgggccaccaatgatacctttgattgggatgcc
tacatcaatgacgaagggaacttctacttcctggagggatccaacgatgccttgctctgt
gggaacagcagtgatgctgggcactgccccgagggttatgagtgcatcaaggccgggcgg
aaccccaactatggctacaccagctacgacaccttcagctgggccttcctggctctcttc
cgcctcatgacacaggactattgggagaacctcttccagctgacccttcgagcagctggc
aaaacctacatgatcttcttcgtggtcatcatcttcctgggttctttctacctcatcaat
ctgatcctggccgtggtggccatggcgtatgctgagcagaacgaggccaccctggctgag
gataaggagaaagaggaggagtttcagcagatgcttgagaagttcaaaaagcaccaggag
gagttggagaaggccaaggccgcccaagctctggaaggtggagaggcagatggggaccca
gcccatggcaaagactgcaatggcagcctggacacatcgccaggggagaaggaagccccg
aggcagagtggcagcggagacagcggcatctctgatgccatggaagaactggaagaggcc
caccagaagtgcccgccatggtggtacaagtgtgcccacaaagtgctcatatggaactgc
tgcgccccgtgggtgaagttcaagaacatcatccacctgattgtcatggatccgtttgtg
gacctgggcatcaccatctgcatcgtgctcaacaccctcttcatggccatggagcattac
cccatgacggagcactttgacaacgtgctcaccgtgggcaacctggtcttcacgggcatc
ttcacagcagagatggttctgaagctgatcgccatggacccctatgagtacttccagcag
ggctggaacatcttcgacagcatcatcgtcaccctcagcctggtagagctaggcctggcc
aacgtacaggggctgtctgtgctccgctccttccgtctgctgcgggtcttcaagctggcc
aagtcgtggccgacactgaacatgctcatcaagatcatcggcaactctgtgggggcgctg
ggcaacctgacgctggtgctggccatcatcgtgttcatcttcgccgtggtgggcatgcag
ctttttggcaagagttacaaggagtgcgtgtgcaagatcgcttcggactgcagcctgccg
cgctggcacatgcacgatttcttccactctttcctcatcgtcttccgcatcctgtgcggg
gaatggatcgagaccatgtgggactgcatggaggtggccggacaagccatgtgcctcacc
gtctttctcatggtcatggtcatcggcaaccttgtggtcctgaacttgttcctggctctg
ctgctgagctccttcagtgctgacagcctggcagcctcggatgaggacggtgagatgaac
aacctgcagattgccatcgggcgaatcaagtggggcatcagctttgccaaggccttcctc
ctagggctgctgcatggcaagatcctgagcgccaaggacatcatgctcagccttggggag
cctattggggccggggaggctggagaggctggggagactgcccctgaggatgagaagaag
gagccgcctgaggaagacctgaagaaggacaatcacatcctgaaccatgtgggcctggct
gatggtcccccatccagcatcgagctggaccacctcaacttcatcaacaacccctacctg
accatccaggtgcccatcgcttccgaggagtccgacctggagatgcccactgaggaggaa
accgacactttctcggagcctgaggatggcaagaagccaccacagcccctctacgacggg
aactcctccgtctgcagcactgctgactacaagccccctgaggaggaccctgaggagcag
gcagaggagaaccccgaggagcagcctgaggagtgcttcaccgaggcctgcgtgcagcgc
tggccctgcctctacgtggacatttcccagggccgagggaagaagtggtggactcttcgc
agggcctgcttcaagattgtcgagcacaattggttcgagaccttcattgtcttcatgatc
ctgctcagcagcggggctctggccttcgaggacatctacattgagcagcggcgagtcatc
cgcaccatcctcgaatatgccgacaaagtcttcacctacatcttcatcatggagatgctg
ctcaaatgggtggcctatggcttcaaggtgtacttcaccaatgcctggtgctggctcgac
ttcctcatcgtggacgtctccatcatcagcctggtggccaactggctgggctattcggag
ctgggacccatcaaatcccttcggacacttcgggccctgcgtcccctgagggcactgtcc
cgattcgagggcatgagggtggtggtgaatgccctcctgggtgctatcccctccatcatg
aacgtgctgctcgtctgcctcatcttctggctgatcttcagtatcatgggtgtcaacctg
tttgccggcaagttctactactgcatcaacaccactacctctgagaggttcgacatatcc
gaggtcaacaacaagtctgagtgcgagagcctcatgcacacgggccaggtccgctggctc
aacgtcaaggtcaattatgacaacgtgggtctgggctacctctccctcttgcaggtggcc
accttcaagggctggatggacatcatgtatgcagctgtggactcccgggagaaggaggag
cagccgcagtacgaggtgaacctctacatgtacctctactttgtcatcttcatcatcttc
ggctccttcttcaccctcaacctcttcatcggcgtcatcattgacaacttcaaccagcag
aagaagaagtttggagggaaagacatctttatgacagaggaacagaagaaatactataat
gccatgaagaagctcggctccaagaagcctcagaagccaattccccggccccagaacaag
atccaggccatggtgtatgacctcgtgacgaagcaggtcttcgacattaccatcatgatc
ctcatctgcctcaacatggtcaccatgatggtggagacagatgaccagagccagcttaag
gtggacatcctgtacaacatcaacatgatcttcatcatcatcttcacaggggagtgtgtg
ctcaagatgcttgccctgcgccagtactacttcaccgttggctggaacatctttgacttc
gtggttgtcatcttgtccatcgtgggcctggcactctccgacctgatccagaaatacttc
gtgtcacccacgctgttccgcgtgatccgcctggcgcggatcgggcgcgtcctgcggctg
atccgcggggccaagggcatccggacgctgctgttcgccctcatgatgtcgctgcctgcc
ctattcaacattggcctcctcctcttcctggtcatgttcatctactccatcttcggcatg
tccaacttcgcctacgtcaagaaggagtcaggcattgatgacatgttcaactttgagacc
ttcggcaatagcatcatctgcctgttcgagatcaccacgtcagctggctgggacgggctc
ctcaaccccatcctcaatagcgggcctccggactgcgaccccagcctggagaacccaggc
accagcatcaagggcgactgtggcaacccctccatcggtatctgcttcttctgcagttac
atcatcatctccttcctcatcgtggtcaacatgtacattgccatcatcctggaaaacttc
aatgtggccacagaggagagcagcgagccccttggtgaggacgactttgagatgttctac
gagacgtgggagaagttcgaccccgacgccacccagttcattgcctacaaccgcctctca
gactttgtggacaccctgcaggagccactgcggatcgccaagcccaacaagatcaagctc
atcacgctggacctgcccatggtgccgggggacaagatccactgcctggacatcctcttc
gccctgaccaaagaggtcctgggtgactctggggaaatggatgccctcaagcagaccatg
gaggagaagttcatggcagccaacccctccaaggtgtcctacgagcccatcaccaccacc
ctcaaaaggaagcacgaggaggtgtgtgccatcaagatccagagggcctaccgccggcac
ctgctccagcgctccatgaagcaggcatcctacatgtaccgccacagccacgatggcagc
ggggatgatgcccctgagaaggaggggctgctcgccaacaccatgggcaagatgtatggt
cacgagaacaggaacagcagctcacagagcccagaggagaagggcaaggcaggggatgcc
ggacccgccatggggctgatacccatcagcccctcagacactgcccagcctcctgagcct
ctgccagggcagacagtgcgctcgggggtcaaggagtctcttgtctag |