KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100414137
Entry
100414137         CDS       T03264                                 
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cjc04040]
    100414137 (SCN4A)
Ion channels [BR:cjc04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   100414137 (SCN4A)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel GPHH IQ Lustrin_cystein
Other DBs
NCBI-GeneID: 100414137
NCBI-ProteinID: XP_035156339
Ensembl: ENSCJAG00000019443
UniProt: F7HE89
LinkDB
Position
5:complement(85215590..85267457)
AA seq 1835 aa
MARPSLATVVPLGPECLRPFTRESLAAIEQRVVEEEARLQRNKQMEIEEPERKPRSDLEA
GKNLPMIYGDPPPEAIGIPLEDLDPYYCDKKTFIVLNKGKAIFRFSATPALYMLSPFSMV
RRGAIKVLIHALFSMFIMITILTNCVFMTMSNPPPWSKNVEYTFTGIYTFESLIKILARG
FCVDDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRHKCVRWPPPFNDTNTTWYSNDSW
YGNDTWYGDAMWHTNDSWYANDTWNSHASWATNDTFDWDAYINDEGNFYFLEGSNDALLC
GNSSDAGHCPEGYECIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAG
KTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDKEKEEEFQQMLEKFKKHQE
ELEKAKAAQALEGGEADGDPAHGKDCNGSLDTSPGEKEAPRQSGSGDSGISDAMEELEEA
HQKCPPWWYKCAHKVLIWNCCAPWVKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHY
PMTEHFDNVLTVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSIIVTLSLVELGLA
NVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ
LFGKSYKECVCKIASDCSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLT
VFLMVMVIGNLVVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGISFAKAFL
LGLLHGKILSAKDIMLSLGEPIGAGEAGEAGETAPEDEKKEPPEEDLKKDNHILNHVGLA
DGPPSSIELDHLNFINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDGKKPPQPLYDG
NSSVCSTADYKPPEEDPEEQAEENPEEQPEECFTEACVQRWPCLYVDISQGRGKKWWTLR
RACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIMEML
LKWVAYGFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALS
RFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDIS
EVNNKSECESLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEE
QPQYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPQNKIQAMVYDLVTKQVFDITIMILICLNMVTMMVETDDQSQLK
VDILYNINMIFIIIFTGECVLKMLALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYF
VSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGM
SNFAYVKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPSLENPG
TSIKGDCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFY
ETWEKFDPDATQFIAYNRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILF
ALTKEVLGDSGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRAYRRH
LLQRSMKQASYMYRHSHDGSGDDAPEKEGLLANTMGKMYGHENRNSSSQSPEEKGKAGDA
GPAMGLIPISPSDTAQPPEPLPGQTVRSGVKESLV
NT seq 5508 nt   +upstreamnt  +downstreamnt
atggccagaccgtctcttgccaccgtggtgcctctgggccctgagtgcctgcgccccttt
acccgggagtccctggcagccatagaacagcgggtggtggaggaggaggcccggctgcag
cggaacaagcagatggagattgaggagcccgaacggaagcctcgaagtgacttggaggct
ggcaagaacctgcccatgatctatggagaccccccgccagaggccatcggcatccccctg
gaggacctggatccctactactgcgacaagaagaccttcatcgttctcaacaagggcaag
gccatcttccgcttctccgccacacccgctctctacatgctgagccccttcagcatggtc
aggcgaggggccatcaaggtgctcatccacgcgctgttcagcatgttcatcatgatcacc
atcttgaccaactgtgtgttcatgaccatgagtaacccgcctccctggtccaagaatgtg
gagtacaccttcacagggatctatacctttgagtccctcatcaagatactggcccggggc
ttctgtgtcgatgacttcacattcctccgggacccctggaattggctggacttcagcgtc
atcatgatggcgtacctgacagagtttgtggacttgggcaacatctcagccctgaggacc
ttccgggtgctgcgggccctcaaaaccatcacagtcatcccagggctgaagacgattgtg
ggggccctgatccagtctgtgaaaaagctgtcagatgtgatgatcctcactgtcttctgc
ctgagcgtctttgcgctggtggggttgcagctcttcatgggaaacctgaggcacaagtgt
gtgcgctggcccccgccgttcaacgacaccaacaccacatggtacagcaatgactcgtgg
tacggtaacgacacgtggtatggtgatgcaatgtggcacaccaatgactcatggtatgcc
aacgacacgtggaacagccatgcaagctgggccaccaatgatacctttgattgggatgcc
tacatcaatgacgaagggaacttctacttcctggagggatccaacgatgccttgctctgt
gggaacagcagtgatgctgggcactgccccgagggttatgagtgcatcaaggccgggcgg
aaccccaactatggctacaccagctacgacaccttcagctgggccttcctggctctcttc
cgcctcatgacacaggactattgggagaacctcttccagctgacccttcgagcagctggc
aaaacctacatgatcttcttcgtggtcatcatcttcctgggttctttctacctcatcaat
ctgatcctggccgtggtggccatggcgtatgctgagcagaacgaggccaccctggctgag
gataaggagaaagaggaggagtttcagcagatgcttgagaagttcaaaaagcaccaggag
gagttggagaaggccaaggccgcccaagctctggaaggtggagaggcagatggggaccca
gcccatggcaaagactgcaatggcagcctggacacatcgccaggggagaaggaagccccg
aggcagagtggcagcggagacagcggcatctctgatgccatggaagaactggaagaggcc
caccagaagtgcccgccatggtggtacaagtgtgcccacaaagtgctcatatggaactgc
tgcgccccgtgggtgaagttcaagaacatcatccacctgattgtcatggatccgtttgtg
gacctgggcatcaccatctgcatcgtgctcaacaccctcttcatggccatggagcattac
cccatgacggagcactttgacaacgtgctcaccgtgggcaacctggtcttcacgggcatc
ttcacagcagagatggttctgaagctgatcgccatggacccctatgagtacttccagcag
ggctggaacatcttcgacagcatcatcgtcaccctcagcctggtagagctaggcctggcc
aacgtacaggggctgtctgtgctccgctccttccgtctgctgcgggtcttcaagctggcc
aagtcgtggccgacactgaacatgctcatcaagatcatcggcaactctgtgggggcgctg
ggcaacctgacgctggtgctggccatcatcgtgttcatcttcgccgtggtgggcatgcag
ctttttggcaagagttacaaggagtgcgtgtgcaagatcgcttcggactgcagcctgccg
cgctggcacatgcacgatttcttccactctttcctcatcgtcttccgcatcctgtgcggg
gaatggatcgagaccatgtgggactgcatggaggtggccggacaagccatgtgcctcacc
gtctttctcatggtcatggtcatcggcaaccttgtggtcctgaacttgttcctggctctg
ctgctgagctccttcagtgctgacagcctggcagcctcggatgaggacggtgagatgaac
aacctgcagattgccatcgggcgaatcaagtggggcatcagctttgccaaggccttcctc
ctagggctgctgcatggcaagatcctgagcgccaaggacatcatgctcagccttggggag
cctattggggccggggaggctggagaggctggggagactgcccctgaggatgagaagaag
gagccgcctgaggaagacctgaagaaggacaatcacatcctgaaccatgtgggcctggct
gatggtcccccatccagcatcgagctggaccacctcaacttcatcaacaacccctacctg
accatccaggtgcccatcgcttccgaggagtccgacctggagatgcccactgaggaggaa
accgacactttctcggagcctgaggatggcaagaagccaccacagcccctctacgacggg
aactcctccgtctgcagcactgctgactacaagccccctgaggaggaccctgaggagcag
gcagaggagaaccccgaggagcagcctgaggagtgcttcaccgaggcctgcgtgcagcgc
tggccctgcctctacgtggacatttcccagggccgagggaagaagtggtggactcttcgc
agggcctgcttcaagattgtcgagcacaattggttcgagaccttcattgtcttcatgatc
ctgctcagcagcggggctctggccttcgaggacatctacattgagcagcggcgagtcatc
cgcaccatcctcgaatatgccgacaaagtcttcacctacatcttcatcatggagatgctg
ctcaaatgggtggcctatggcttcaaggtgtacttcaccaatgcctggtgctggctcgac
ttcctcatcgtggacgtctccatcatcagcctggtggccaactggctgggctattcggag
ctgggacccatcaaatcccttcggacacttcgggccctgcgtcccctgagggcactgtcc
cgattcgagggcatgagggtggtggtgaatgccctcctgggtgctatcccctccatcatg
aacgtgctgctcgtctgcctcatcttctggctgatcttcagtatcatgggtgtcaacctg
tttgccggcaagttctactactgcatcaacaccactacctctgagaggttcgacatatcc
gaggtcaacaacaagtctgagtgcgagagcctcatgcacacgggccaggtccgctggctc
aacgtcaaggtcaattatgacaacgtgggtctgggctacctctccctcttgcaggtggcc
accttcaagggctggatggacatcatgtatgcagctgtggactcccgggagaaggaggag
cagccgcagtacgaggtgaacctctacatgtacctctactttgtcatcttcatcatcttc
ggctccttcttcaccctcaacctcttcatcggcgtcatcattgacaacttcaaccagcag
aagaagaagtttggagggaaagacatctttatgacagaggaacagaagaaatactataat
gccatgaagaagctcggctccaagaagcctcagaagccaattccccggccccagaacaag
atccaggccatggtgtatgacctcgtgacgaagcaggtcttcgacattaccatcatgatc
ctcatctgcctcaacatggtcaccatgatggtggagacagatgaccagagccagcttaag
gtggacatcctgtacaacatcaacatgatcttcatcatcatcttcacaggggagtgtgtg
ctcaagatgcttgccctgcgccagtactacttcaccgttggctggaacatctttgacttc
gtggttgtcatcttgtccatcgtgggcctggcactctccgacctgatccagaaatacttc
gtgtcacccacgctgttccgcgtgatccgcctggcgcggatcgggcgcgtcctgcggctg
atccgcggggccaagggcatccggacgctgctgttcgccctcatgatgtcgctgcctgcc
ctattcaacattggcctcctcctcttcctggtcatgttcatctactccatcttcggcatg
tccaacttcgcctacgtcaagaaggagtcaggcattgatgacatgttcaactttgagacc
ttcggcaatagcatcatctgcctgttcgagatcaccacgtcagctggctgggacgggctc
ctcaaccccatcctcaatagcgggcctccggactgcgaccccagcctggagaacccaggc
accagcatcaagggcgactgtggcaacccctccatcggtatctgcttcttctgcagttac
atcatcatctccttcctcatcgtggtcaacatgtacattgccatcatcctggaaaacttc
aatgtggccacagaggagagcagcgagccccttggtgaggacgactttgagatgttctac
gagacgtgggagaagttcgaccccgacgccacccagttcattgcctacaaccgcctctca
gactttgtggacaccctgcaggagccactgcggatcgccaagcccaacaagatcaagctc
atcacgctggacctgcccatggtgccgggggacaagatccactgcctggacatcctcttc
gccctgaccaaagaggtcctgggtgactctggggaaatggatgccctcaagcagaccatg
gaggagaagttcatggcagccaacccctccaaggtgtcctacgagcccatcaccaccacc
ctcaaaaggaagcacgaggaggtgtgtgccatcaagatccagagggcctaccgccggcac
ctgctccagcgctccatgaagcaggcatcctacatgtaccgccacagccacgatggcagc
ggggatgatgcccctgagaaggaggggctgctcgccaacaccatgggcaagatgtatggt
cacgagaacaggaacagcagctcacagagcccagaggagaagggcaaggcaggggatgcc
ggacccgccatggggctgatacccatcagcccctcagacactgcccagcctcctgagcct
ctgccagggcagacagtgcgctcgggggtcaaggagtctcttgtctag

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