Callithrix jacchus (white-tufted-ear marmoset): 100415038
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Entry
100415038 CDS
T03264
Symbol
LGI1
Name
(RefSeq) leucine-rich glioma-inactivated protein 1 isoform X1
KO
K25428
leucine-rich repeat LGI family member 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
100415038 (LGI1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRRCT
VWC2L_1st
DUF7448
Motif
Other DBs
NCBI-GeneID:
100415038
NCBI-ProteinID:
XP_002756493
Ensembl:
ENSCJAG00000015588
UniProt:
A0A2R8MNW8
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Position
12:83148024..83185797
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AA seq
642 aa
AA seq
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MQVGSLLQQLDPSHLTVPHRSLPPSSALLERGEAHESAAGPCFEKAEIQRQRKKGGLLCD
LFLEQDNHHLNSRSPVHGWGYFLDCMESERSKRMGNACIPLKRIAYFLCLLSALLLTEGK
KPAKPKCPAVCTCTKDNALCENARSIPRTVPPDVTSLSFVRSGFTEISEGSFLFTPSLQL
LLFTSNSFDVISDDAFIGLPHLEYLFIENNNIKSISRHTFRGLKSLIHLSLANNNLQTLP
KDIFKGLDSLTNVDLRGNSFNCDCKLKWLVEWLGHTNATVEDIYCEGPPEYKKRKINSLS
SKDFDCIITEFAKSQDLPYQSLSIDAFSYLNDEYVVIAQPFTGKCIFLEWDHVEKTFRNY
DNITGTSTVVCKPIVIETQLYVIVAQLFGGSHIYKRDSFANKFIKIQDIEILKIRKPNDI
ETFKIENNWYFVVADSSKAGFTTIYKWNGNGFYSHQSLHAWYRDTDVEYLEIVRTPQTLR
TPHLILSSSSQRPVIYQWNKATQLFSNQTDIPNMEDVYAVKHFSVKGDVYICLTRFIGDS
KVMKWGGSSFQDIQRIPSRGSMVFQPLQINNYQYAILGSDYSFTQVFNWDSEKATFVKFQ
ELNVQAPRSFTHVSINKRNFLFASSFKGNTQIYKHVIVDLSA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtcggctctctcctccagcagttggatccctcccatctcacagtacctcacagg
tctcttcccccgagcagtgcattgctggagcgaggagaagctcacgaatcagctgcaggt
ccctgttttgaaaaagcagagatacagaggcagaggaaaaagggtggactcctatgtgac
ctgttcttagagcaagacaatcaccatctgaattccagaagccctgttcatggttgggga
tattttctcgactgcatggaatcagaaagaagcaaaaggatgggaaatgcctgcattccc
ctgaaaagaattgcttatttcctatgtctcttatctgcgcttttgctgactgaggggaag
aaaccagcgaagccaaaatgccctgccgtgtgtacttgtaccaaagataatgctttatgt
gagaatgccagatccattccacgcaccgttcctcctgatgttacctcattatcctttgtg
agatctggttttactgaaatctcagaagggagttttttattcacaccatcgctgcagctc
ttgttattcacatcgaactcctttgatgtgatcagtgatgatgcttttattggtcttcca
catctagagtatttattcatagaaaacaacaacatcaagtccatttcaagacatactttc
cggggactaaagtcattaattcacttgagccttgcaaacaacaatcttcagacactccca
aaagatattttcaaaggcctggattctttaacaaatgtggacctgagggggaattcattt
aattgtgactgtaaactgaaatggctggtggaatggcttggccacaccaatgcaactgtt
gaagacatctactgtgaaggccccccagaatacaagaagcgcaaaatcaatagtctctcc
tccaaggatttcgattgcatcattacagaatttgcaaaatctcaagacctgccttatcaa
tcattgtccatagatgctttttcttatttgaacgatgagtatgtagtcatcgctcagcct
tttactggaaaatgcatcttccttgaatgggaccatgtggaaaagaccttccggaattat
gataacatcacaggcacgtccactgtagtatgcaagcctatagtcattgaaactcagctg
tatgttatcgtggcccagctgtttggtggctctcacatctataagcgagacagttttgca
aataaattcattaaaatccaggatattgaaattctcaaaatccgaaaacccaatgacatt
gaaacattcaagattgaaaacaactggtactttgttgtggctgacagttcaaaagctggt
tttactaccatttacaaatggaatggaaacggattctactcccatcagtccttacacgcg
tggtacagggacactgatgtggaatatctggaaatagtcagaacacctcagacactcaga
acgcctcatttaattctgtctagtagttcccagcgtcctgtaatttatcagtggaacaaa
gcaacacaattattcagtaaccaaactgacattcctaacatggaggatgtatatgcagtg
aagcacttctcagtgaaaggggatgtgtacatttgcttgacaagattcattggtgattcc
aaagtcatgaaatggggaggctcctcattccaggatattcagaggataccatcacgagga
tctatggtgttccagcctcttcagataaataattaccaatatgcaattcttggaagtgat
tactcctttactcaagtgtttaactgggattcagagaaagccacatttgtgaaatttcag
gaattaaatgttcaggcaccaagatcattcacgcatgtgtccattaataagcgtaatttt
ctttttgcttccagttttaagggaaatacacagatttacaaacatgtcatagttgactta
agcgcatga
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