Callithrix jacchus (white-tufted-ear marmoset): 118149682
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Entry
118149682 CDS
T03264
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04340
Hedgehog signaling pathway
cjc04390
Hippo signaling pathway
cjc05200
Pathways in cancer
cjc05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118149682
04390 Hippo signaling pathway
118149682
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118149682
09162 Cancer: specific types
05217 Basal cell carcinoma
118149682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
118149682
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
118149682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
FOXP-CC
zf-H2C2_2
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
118149682
NCBI-ProteinID:
XP_035137582
LinkDB
All DBs
Position
20:complement(5150059..5155399)
Genome browser
AA seq
1573 aa
AA seq
DB search
METSASATVSEKQEAKSGLLEAAGFPDLGKKASPLVVAAAAAVVVAQGVLQHLLPRFHAP
LPIDMRHQEGRYHYEPHSVHGVHGPPALSGSPVISDISLIRLSPHPAGPGDSPFNAPHLY
VNPHMKHYLRSVHSSPTLSMISAARGLSTAEVAQEHLXERGLFGLPAPGTTPSDYYHQMT
LMAGHPAPYGDLLMQSGGAASAPHLHDYLNPVDVSRFSKPRVTPRLSRKRTLSISPLSDA
SLDLQRMIRTSPNSLVAYINNSRSSSAASGSFGHLSAGTLSPAFTFPHPINPVAYQQILS
QQRGLGSAFGHTPPLIQPSPTFLAQQPMALTSVNAIPTQLSSSSNCLSDNQNKQSSESAV
SSTINPVVXKRSKVKTEPEGLRPASPLALTQGQVSGHGSCGCALPLSQEQLADLKEDLDR
NDCKQKAEVVIYETNCHWEDCTKEXDTQEQLVHHINNEHIHGEKKEFVCCWQACTREQKP
FKAQYMLVVHKGRHTGEKPQKCTFEGCSKAYSRLENLKTHLRSHTGEKSYVCEHEGCNKT
FSNASDRAEHQNRIHSNEKPYICKIPGCTKRYTDSSSLLKHVKTVHGPDAHVTKKQRNDV
HLGTPLLKENGDSEAGAEPGGRGSEDSAEASSTSQAVEDCLHVRANKTESSRLCQSSPGA
QSSCSSEPSPLGSAPNNDSGVEMSGTRPRSLGDLTALDDTPPGADTSALAAPSXLQLRKR
MTTMHGFEQLKKEKLKSLKDSCSWAGPTPHTRNTKLPPLPGSGSILENFSGSVGGGPSGL
LPNPRLSELSASEVTMLSQLQERRESSTSTVSSAYTVSRRSSGISPYFSSRRSSEASPSA
DSYDPISTDAXRPSSEASQCSGGSGLLSLTPAQHYSLRAKYAAATGGPPPTPLPGLERMS
LRTRSALLDAPERALPPGCPRPLGPRHGSDGPTYGHGHAXVAPAFPHEAPGGGARRASDP
VRRPDALALPRVQRFHSAHNVNPGPLPPCADRXGLRLQSQPSTDGGLARSTYSPRPPSIS
ENMVMEAVAAGADSAGPEADLGLLEDDLVLPDDVVQCIKAHASGALDEGARQVYPTESSG
FSDNPKLPSPGLHGQRRMVAADSNIGPCAPVLGGCQLGFGAPSSLNKNNMPVQWNEVSSG
TVDALASQVKPSPVPQGNLAVVQQKPAFGQYPGYSPQGLQVSPGGLDSXQPHLQLRSRAP
SQGMPRVNYMQQLRQPAAGSQCPGMTTAMSPHACYGQAHPQLGPSTISGALSQFTPSCSS
MPAKPVQLGHPQQTEVAPDPIMMDNCHRELGVLNSALAGVPPPHPVQSYPQQSHHLAAPM
SQEGYHQVPSLLPAHQPGFMEPQPGLMGVATVGFGLVQPRPPPEPSPAGRHRGVRAVQQK
LVYARATGHAMAAMPSSQETAEAVPKGAIGTMGSAPPQLPPPDSGRPPDHSMLYYYGQIH
MYEQDGGLENLGGCQVTRSQLPQRQTCQDNIQPQPLPSPRVNQVSSTVDSQLLEAPQIDF
DAIMDDGNHSSLFSGALSPSLLHNLSQNSSQLTTPRNSLRLPSIPAGISNMAVGDMSSML
TSLAESKFLNMMT
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atggagacatctgcctcagccactgtctctgagaagcaagaagccaaaagtgggctcctg
gaggccgctggcttccccgacctgggcaaaaaggcctctcctctggtggtggccgcagcg
gcagcagtggtggttgcccaaggagtgctgcagcacctcttaccacggttccatgcgccc
ctacccattgatatgcgacaccaggagggaaggtaccattacgagcctcattctgtccac
ggtgtgcacgggccccccgccctgagcggcagccctgtcatctctgacatctccttgatc
cggctttccccacatccggctggccctggggactcccccttcaacgccccccacctgtat
gtgaacccccacatgaagcactacctccgttccgtgcacagcagccccacgctctccatg
atctctgcagccaggggcctcagcaccgctgaagtggcccaggagcaccttnaggagagg
ggtctgtttggcctgcctgctccaggcaccaccccctcagactattaccaccagatgacc
ctcatggcaggccaccccgcaccttatggggacctgctgatgcagagcgggggtgctgcc
agcgcaccccatctccatgactacctcaacccagtggacgtgtcccgtttctccaaacct
cgggtgacgccccgcctgagccgcaagcgtacgctgtccatctctccactctcagacgcc
agcctggaccttcagcggatgatccgcacctcacccaactcgctggtggcctacatcaac
aattcccgcagcagctcagcggccagcggctcctttgggcacctgtcggcgggcaccctc
agcccagccttcactttccctcaccccatcaaccccgtggcttaccagcagattctgagc
cagcagaggggtctggggtcagcctttggacacacaccacccctgatccagccctcaccc
accttcctggctcagcagcccatggccctcacctccgtcaatgccatacccacccagctc
agcagcagcagcaactgtctgagtgacaaccagaacaagcagagcagtgagtcggctgtg
agcagcaccatcaaccccgtcgtgnncaagcgcagcaaggtcaagaccgagcctgagggc
ctgcggccggcctcccctctggcattgacgcaaggccaggtgtccggacacggctcatgt
gggtgtgcccttcccctctcccaggagcagctggctgacctcaaggaagacctggacagg
aatgactgcaagcaaaaggctgaggtggtcatctatgagaccaactgccactgggaagac
tgcaccaaggagtaggacacccaggagcagctggtgcaccacatcaacaacgagcacatc
cacggggagaagaaggagttcgtgtgctgctggcaggcctgcacgcgggagcagaagccc
ttcaaggcacagtacatgctggtggtgcacaaggggcggcacacgggcgaaaagccccaa
aagtgcacgttcgagggctgctcgaaggcctactcacgcctggagaacctgaagacgcac
ctgcggtcccacaccggggagaagtcatatgtgtgtgagcacgagggctgcaacaagacc
ttctccaacgcctcggaccgcgccgagcaccagaaccgcatccactccaacgagaaaccc
tacatctgcaagatcccaggctgcacgaagcgatacacagactccagctctctcctgaag
catgtgaaaacggtccacggcccagacgcccacgtcaccaagaagcagcgcaacgacgtg
cacctcggcacaccgctgctcaaagagaacggggacagtgaggccggcgccgagcctggc
ggccgtggttctgaggacagcgccgaggccagcagcaccagccaggctgtggaggactgc
ctgcacgtcagagccaacaagaccgagagctccaggctgtgtcagtccagccccggggcc
cagtcatcctgcagcagcgagccctctcccctgggcagtgcccccaacaatgacagtggc
gtggagatgtcggggacccggcccaggagcctgggagacctgacggcgctggatgacaca
cctccaggggccgacacctcagccctggctgccccctccngcctccagctgcgcaaacgc
atgaccaccatgcacggatttgagcagctcaagaaggagaagctcaagtcactcaaggat
tcctgctcatgggccgggccgactccacacacgcggaacaccaagctgcctcccctcccg
ggaagtggctccatcctggaaaacttcagcggcagtgtgggcggcgggccctcgggcctg
ctgcccaatccgcgactgtcagagctgtccgccagcgaggtgaccatgctgagccagctg
caggagcgccgcgaaagctccaccagcacggtcagctcggcctacaccgtgagccgccgc
tcctccggcatctccccctacttctccagccgccgctccagcgaggcctcgccctccgca
gactcctacgaccccatctccacggatgcgtagcggccctcgagcgaggccagccagtgc
agcggcggctccgggctgctcagcctcacgccggcgcagcactacagcctgcgggccaag
tacgcagcggccacgggcggccccccacctaccccgctgccagggctggagcgcatgagc
ctgcggaccaggtcggcgctgctggatgcgccagagcgcgcgctgccccccggctgccca
cgcccgctggggccgcggcatggcagcgatgggccgacctatggccacggccacgcataa
gtcgcacccgccttccctcacgaggctccggggggcggcgccaggcgggccagcgaccct
gtgcggcggcccgatgccctggccctgccgcgggtgcagcgcttccacagcgcccacaac
gtgaaccccggcccgctgccgccctgtgccgacagatgaggcctccgcctgcagagccag
ccgagcaccgacggcggcctggcccgcagcacctactcgccccggccgcccagcatcagc
gagaacatggtgatggaggccgtggcggcaggagccgacagcgcgggaccggaggccgac
ctggggctgctggaggacgaccttgtgctgcccgacgatgtggtgcagtgtatcaaggcg
cacgccagtggcgctctggatgaaggtgcccggcaggtgtatcccacggaaagcagtggc
ttctctgacaaccccaaactgcccagcccggggctgcacggccagcggaggatggtggct
gcggactccaacattggtccctgtgcccctgtgctgggaggatgccagctgggctttggg
gcaccctccagcctgaacaaaaataacatgcctgtgcagtggaacgaggtgagctccggc
acagtggacgccctggccagccaggtgaagccttcacccgttcctcagggcaacctggcg
gtggtgcagcagaagccagcctttggccagtacccaggctacagtccacaaggcctacag
gtgagtcctgggggcctggacagcnagcagccacaccttcagctccgcagcagagcccct
tcccagggcatgcccagggtaaactacatgcagcagctgcgacagccagcggcaggcagc
cagtgtcctggcatgactaccgctatgagcccccatgcctgctatggccaagcccacccc
cagctgggccctagcaccatcagtggggccctcagccagttcaccccatcctgcagcagc
atgccagccaagccagtccagctgggacacccacagcagacggaagttgcacctgacccc
atcatgatggacaactgccacagggaactcggggtcctcaattcagccctggctggagtg
ccaccacctcacccagtccagagctacccacagcagagccatcacctggcagcccccatg
agccaggagggctaccaccaggtccccagccttctgcctgcccaccagcctggcttcatg
gagccccagccaggcctaatgggagtggctacagtaggctttggcctagtgcaaccccgg
cctccgcccgagcccagccctgctggccgccaccgtggggtacgtgctgtgcagcagaag
ctggtctatgccagggccacaggccatgccatggctgccatgccatccagtcaggagaca
gcagaggctgttcccaagggagcaataggcaccatggggtcagcgcctccccagctgcct
ccaccagactcagggaggcccccggaccacagcatgctctactactatggccagatccac
atgtacgaacaggatggaggcctggagaacctcgggggctgccaagtcacgcggtcccag
ctaccacagcgacagacctgccaggacaacatccagccccagcccttgccctcaccaagg
gtcaaccaagtgtccagcactgtggactcccagctcctggaggccccccagattgacttt
gatgccatcatggatgatggcaatcactcgagtttgttctcgggtgctctgagccccagc
ctcctccacaatctctcccagaactcctcccaactcaccaccccccgaaattccctgagg
ctgccctccatccccgcaggcatcagcaacatggctgtcggggacatgagctccatgctc
accagcctcgcggagagcaagttcctgaacatgatgacctag
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integrated database retrieval system
