Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819: Cj0586
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Entry
Cj0586 CDS
T00026
Symbol
ligA
Name
(RefSeq) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cje
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Pathway
cje03030
DNA replication
cje03410
Base excision repair
cje03420
Nucleotide excision repair
cje03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cj0586 (ligA)
03410 Base excision repair
Cj0586 (ligA)
03420 Nucleotide excision repair
Cj0586 (ligA)
03430 Mismatch repair
Cj0586 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cje03032
]
Cj0586 (ligA)
03400 DNA repair and recombination proteins [BR:
cje03400
]
Cj0586 (ligA)
Enzymes [BR:
cje01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Cj0586 (ligA)
DNA replication proteins [BR:
cje03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Cj0586 (ligA)
DNA repair and recombination proteins [BR:
cje03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Cj0586 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cj0586 (ligA)
MMR (mismatch excision repair)
DNA ligase
Cj0586 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cj0586 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
PTCB-BRCT
Nlig-Ia
BRCT_2
RPA_interact_C
Motif
Other DBs
NCBI-GeneID:
904909
NCBI-ProteinID:
YP_002344016
UniProt:
Q0PAT1
LinkDB
All DBs
Position
545332..547275
Genome browser
AA seq
647 aa
AA seq
DB search
MKKEEYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRVFEEQNKDEISKDSPTQKI
APTIQSEFKKIAHLKRMWSMEDVFDESELRAWAKRAKCEKNFFIEPKFDGASLNLLYENG
KLVSGATRGDGEVGEDITLNVFEIENIPKNIAYKERIEIRGEVVILKDDFEKINEKRALL
NQSLFANPRNAASGSLRQLDTSITKERNLKFYPWGVGENTLNFTKHSEVMQFIRELGFLK
DDFVRLCANLDEVLKAYDELLALREKKPMMMDGMVVRVDDLALCEELGYTVKFPKFMAAF
KFPALEKTTRLIGVNLQVGRSGVITPVAVLEPVNLDGVVVKSATLHNFDEIARLDVKIND
FVSVIRSGDVIPKITKVFKERREGLEMEISRPKLCPTCQSELLDEGTLIKCQNIDCEDRL
VNSIIHFVSKKCLNIDGLGENIVELLYKHKKITTLESIFHLKFNDFEGLEGFKEKKINNL
LNAIEQARECELFRFITALGIEHIGEVAAKKLSLSFGKEWYKQSFEAYANLEGFGEQMAL
SLCEFTRVNRTRIDEFYKLLNLKIEKLEIKSDGVIFGKTFVITGTLSRPRDEFKALIEKL
GGKVSGSVSKKTDYVLFGEEAGSKLSKAKELEVKCIDESAFNELVKE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaagagtatttagaaaaagttgctttagctaatttgtggatgagggcatat
tatgaaaaagatgaacccttggctagcgatgaagaatacgatgctttaatcagagaatta
agagtttttgaagaacaaaataaagatgaaatttcaaaagactctccaacgcaaaaaata
gctcctactatacaaagtgagtttaaaaaaatagctcatttaaagcgtatgtggtcgatg
gaagatgtgtttgatgagagtgagcttagagcttgggcaaaacgcgcaaaatgtgaaaaa
aacttttttatagagcctaaatttgatggagcgagtttaaatttgctttatgaaaatggt
aaattagtaagcggcgccactaggggcgatggcgaagtgggtgaggatataacgcttaat
gtttttgagatagaaaatatacctaaaaatatagcctataaagaaaggatagaaattcgt
ggagaagtggtgattttaaaagatgattttgagaaaatcaacgaaaaaagagccctttta
aatcaaagtttatttgccaatccacgcaatgctgcaagtgggagtttaaggcagcttgat
acaagcatcactaaagaaagaaatttgaaattttatccttggggagtaggggaaaatacc
ttaaatttcaccaaacacagcgaggtgatgcaatttatcagagagcttggttttttaaag
gatgattttgtaagactttgcgctaatttagacgaagttttgaaagcttatgatgagctt
ttagctctaagagaaaaaaaacctatgatgatggatggaatggtggtaagagttgatgat
cttgcactttgtgaagaattaggctatacggtaaaatttccaaaatttatggcagctttt
aaatttcctgcgcttgaaaaaaccacgcgtttaataggggtaaatttacaagtaggaaga
agtggagtgatcactcctgtggcagttttagaacctgtaaatttagatggggttgtagta
aaatcagccacccttcataattttgatgaaattgcaagacttgatgttaaaatcaatgat
tttgtaagcgtgataagaagtggcgatgttatccctaaaatcactaaggtttttaaagag
cgtagagaaggtttagagatggaaatttcacgccctaagctttgtcctacttgccaaagt
gagcttttggatgaaggaactttaataaaatgtcaaaatatagattgtgaagatagactt
gtaaattctatcattcattttgtttctaaaaaatgtcttaatatcgacggactgggagaa
aatatagtagaacttttatacaagcacaaaaaaatcactacgcttgagagtatttttcat
ttaaaatttaatgattttgaaggtttggaaggctttaaagaaaagaaaattaacaatctt
ttaaatgccatagaacaagcaagagaatgtgagctttttcgttttatcacagctttagga
atagagcatattggcgaggttgcggctaaaaaattaagtttaagttttggtaaagagtgg
tacaagcaaagctttgaagcttatgccaatttagaaggttttggagagcaaatggcttta
agtctttgcgaatttacgcgtgttaatcgcacaagaattgatgagttttacaagctttta
aatttgaaaatagaaaaacttgaaatcaaaagcgatggtgtgatttttggtaaaactttt
gtgattacaggcactctttcacgcccaagagatgagtttaaggctttgatagaaaagctt
gggggtaaggtaagcggctcggtttctaaaaagactgactatgtgctttttggagaagag
gcaggttctaagcttagtaaggctaaagagcttgaagtaaaatgtatagatgaaagtgct
tttaatgagcttgttaaagaatag
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