Cryptomeria japonica (Japanese cedar): 131027470
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Entry
131027470 CDS
T10556
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00970
Aminoacyl-tRNA biosynthesis
Brite
Enzymes [BR:
cjf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
131027470
Amino acid related enzymes [BR:
cjf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
131027470
Transfer RNA biogenesis [BR:
cjf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
131027470
Prokaryotic type
Other AARSs
131027470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
131027470
NCBI-ProteinID:
XP_057813532
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All DBs
Position
4:724132266..724282647
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AA seq
1191 aa
AA seq
DB search
MEDVCEGKDFNFAKQEEKILEMWQAMDAFHTQLKKTEGRPEYVFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQTATGHHVTRRFGWDCHGLPVEYEIDTKLGIKSRDDVLSMGIDNYNEE
CRSIVMRYSKEWEKVVTRVGRWIDFQNDYKTLDPQYMESVWWVFEQLWEKDLVYLGFKVM
PYSTGCKTPLSNFEAGLNYKDVSDPAIIVSFPLKDDMDGGALLAWTTTPWTLPSNLALCV
NANFDYAKVRNKTTGAVYILAVSRLSQLPAKKVKADVSNGPHSKSKDSGSKAEGKPKGPQ
EAKRGGLALDANSYELLETFKGSVLVGKKYQPVFDFFSELSDVAFRVVADNYVTDDSGTG
VVHCAPSFGEDDYRVCSDASIIKKGGELIVPVDADGCFTEKIVDFKGRYVKDADKDIISA
LKAKGRLVSSGNIMHSYPFCWRSDTPLLYRAVPSWFVAVEKIKDQLLENNRQTYWVPDYV
KEKRFHNWLENARDWAVSRSRFWGTPLPIWISDDGQEKIIIGSIEKLEKLSGVKVTDIHR
HKIDHITIPSGRGPNFGVLRRVDDVFDCWFESGSMPYAYIHYPFENKEFFEGNFPGHFIA
EGLDQTRGWFYTLMVLSTALFGKPAFKNLICNGLVLAEDGKKMSKRLKNYPPPMEVVDDY
GADALRLYLINSPVVRAEPMRFKKDGVYGVVKDVFLPWYNAYRFLVQNARRLEVEGLNVF
RPVEHSKLQTSLNVLDQWINSASESLVQFVRQEMDHYRLYTVVPYLLKFIDNLTNIYVRF
NRKRLKGRTGEEDCRMALSTLYHVLLTTCKAMSPFTPFFTEAMYQNLVKVLDSGAEESIH
YCSFPEVGGKREERIEQSVTRMTTVIDLARNIRERHNKPLKTPLREMVVVHPDEEFLEDI
TGKLGEYVREELNVRSVKPCNDPLKYATLRAEPDFSALGKRLGKAMGVVAKEVKSMGQAS
ILAFEKSGEVTFSGHTLQLSEIKVFRQFKLPNGVEKEDMDAAGDGDVLVVLDLRPDETLF
EAGVAREIVNRIQKLRKKAGLEPTDTVEVYIKPSEEDETVLTQVVESQAAYIRDAVGSPL
LPSHLCPSHAVILASEKFTGISGMSFTINLARPALRFINNALGALCSANEKHVEDVQVYL
LSRDYSNLKAEFLSANGKVQVACIEGQTPLDIVLGEHLHLSVGDYFLSMRT
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgtctgcgaggggaaggattttaactttgcgaagcaggaagagaagatattg
gagatgtggcaggcaatggatgcatttcatacacagctgaagaagacggaagggagaccc
gaatatgtattctatgatggtcctccttttgccaccgggcttccccattacggtcatatt
ctcgcgggcactatcaaggacatagttactcgctatcagaccgctactgggcaccatgtg
accaggaggtttggatgggattgccacggtttgcccgtggagtacgaaattgatacgaaa
ttggggattaagagtagagatgatgttttgtctatgggcattgataattacaatgaagaa
tgccggagtattgttatgaggtatagtaaggaatgggagaaagttgttactagagttggg
cgatggatcgatttccagaatgattataagactcttgatcctcagtatatggagagcgtt
tggtgggtttttgagcagctctgggagaaagatttggtttacctagggttcaaggttatg
ccatacagcacaggttgtaagacccctctatcaaactttgaagctggactcaattacaag
gacgtatcagatccagcaataatagtttctttccctctaaaagatgatatggatggtgga
gctcttttggcatggactactacaccatggactcttcctagtaatcttgctctatgtgtc
aatgcaaattttgactatgcaaaggtcagaaacaagacaacaggggcagtatacattctt
gcggtgtctcgcttatctcagctgccagcaaagaaggtaaaagcagatgtttctaatggc
cctcactcaaaatcaaaagattcaggatcaaaagcagaaggcaagccaaaaggtcctcag
gaggcaaaaagaggaggacttgcattggatgctaattcatatgaattgctggagacattt
aagggctctgttctggttggtaaaaagtaccagccagtgtttgacttcttctcggagctc
tcagacgttgccttcagagttgttgcagacaattatgtgacagatgacagtggcactggg
gtagtgcattgtgctccttcatttggagaagatgattatcgtgtctgttcagatgcaagt
attattaaaaagggcggggaacttatagtcccagtagatgcagatgggtgctttacagaa
aagattgttgatttcaaaggccgatatgtaaaagatgctgacaaggatattatatctgct
ttgaaggctaagggaagattggttagttcaggcaatataatgcattcttatcccttctgt
tggagatcagatacacctttgctttatagggctgtgccaagctggtttgttgcagtggag
aagattaaagaccagcttctggagaacaacagacagacatattgggttcctgattatgtg
aaggaaaagcgcttccacaattggctggagaatgccagggattgggcagtaagtcgaagc
agattttggggtacaccccttcctatatggattagtgatgatgggcaggaaaaaataatc
ataggttcaattgaaaagctggagaagctttcgggagtcaaggtgactgatattcaccgg
cataaaatagatcacatcacaattccatctggaagaggtcctaattttggagtccttcgg
cgcgttgatgatgtttttgattgctggttcgagagtggatcaatgccttatgcttatatt
cactatccttttgagaacaaggaattttttgagggcaacttcccagggcatttcattgca
gaaggccttgatcagactcgtggatggttttatactctgatggtattatcaacagctttg
tttggcaaaccagcattcaagaatctaatttgcaatggtcttgttttagctgaggatgga
aagaaaatgagcaaacgacttaagaattatccaccgccaatggaagtggttgatgattat
ggagctgatgcactcaggctttatcttataaattcgcccgttgtaagagcagagccaatg
agatttaaaaaggatggagtatatggtgtggtcaaagatgttttccttccatggtacaat
gcttatagattcttagttcagaatgcacgaaggcttgaggttgaaggtctgaatgttttt
aggcctgttgagcatagtaaattgcaaacatcacttaatgttcttgatcaatggatcaat
tctgccagtgagagtcttgttcaatttgtgcggcaagagatggatcactatcgtctgtac
acagttgtaccatatcttctgaagttcattgacaatttaactaatatctatgtacgattt
aaccgtaagcggctgaaaggacgaacaggggaagaggattgcagaatggcactttcaact
ctttaccatgtacttctgactacatgcaaagctatgtcaccgttcactccattttttact
gaagccatgtatcaaaatttggttaaagttcttgattctggagcagaggaaagtatacat
tattgcagttttccggaagttggaggaaagagagaggaacgcattgaacaaagtgttaca
agaatgacgactgtcattgatttggctcgaaatatacgggaacgacacaataagcctttg
aaaacacctctcagagagatggtcgtagttcatcccgatgaggagttcctcgaggatata
actgggaaattaggagagtatgtcagagaagaacttaatgtcagatctgtgaaaccctgt
aatgatcctttaaaatatgcaaccttgcgagccgaaccggattttagtgcattaggtaaa
cgactgggaaaggcaatgggagttgttgccaaggaagtgaagtcaatgggacaggccagc
attctagcatttgaaaagtctggagaagtaacattttctggacacactctacagctgagt
gaaataaaggttttccggcaatttaaactgcctaatggtgtagagaaagaggatatggat
gcagctggtgatggtgatgttttggtagttttggatttgcgccctgatgagacattgttc
gaagcaggtgttgctcgtgagattgtcaatcgtattcaaaagcttcgaaagaaagctggt
ttagaaccaactgacactgtggaagtgtatatcaaaccatctgaagaggacgagactgta
ttgacgcaagtggtagagtcacaggctgcctacattcgggatgctgttggctcaccattg
cttccatctcatctttgcccatcacatgcggtaatcctagcatcagagaaatttactggt
attagtgggatgtcattcacaatcaacctagcaaggccagctttaagattcataaacaat
gcgttaggtgcattgtgctcagccaatgagaagcatgtggaagatgtccaagtatatttg
ctatctagggactactcaaatctaaaggccgaatttctctcagcaaatggaaaggtccaa
gtagcatgcatcgagggccagacacctcttgatatcgtccttggtgaacatttacatctt
tctgtaggagattattttctgagtatgagaacttga
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