Cryptomeria japonica (Japanese cedar): 131035677
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Entry
131035677 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131035677 isoform X1
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjf03016
]
131035677
Enzymes [BR:
cjf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
131035677
Transfer RNA biogenesis [BR:
cjf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
131035677
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
131035677
NCBI-ProteinID:
XP_059063486
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All DBs
Position
6:581704047..582080691
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AA seq
598 aa
AA seq
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MESEGALQAANKLITQLQSQVAVLTKRIQDLELENTTRLSQKLRSCHNMHEERESCQVLC
NGEITVADSNETNQGENKIEFDIHYSNEQDLSTLYLEDNDKVNFQYSPGEDDVVSGSLNM
YTMVFGNIDSSVKNIMHGCHEMDQKTTLGQANIENEPLAKLDTVSGQTEAGNCLIDGSSK
FCQVSDIQDDHVRKKTKDNKKQSVSHCGRRYVALKIMYFGQRFYGFASEANMEPTIESEL
FAAFEKNRLLVGDLSEAQYTRCGRTDKGVSSFGQVIALYLRSNHKTLASGTDSKDLENIS
DENEIDYVRVLNRALPSDIRVLGWSPVPDHFHARFSCLSREYKYYFLRENLDILGMEVAC
KKFLGEHDFRNFCKMDALNVHNYKRQISSFKIVPCDERWAGKEIMAMWIKGSAFLWHQVR
CMAAVLFMIGQGMESPTVIDELLDTNKTCRKPQYKMASDLPLVLQTCEFGGLNFRCSSDA
ARILHLHMEQQLDTSLLQAAIFHEALSQLPDYATTSDTLLLKRGRKKLSHVPLSLRPTER
FDGPNCVLVQSISVLSTYELIFVYLPTYKVFGRLCLVSFQIYLKLYYFYFIIDLMYYF
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagaaggagcgctccaggctgctaacaaacttatcacacaattacagtcacaa
gttgccgtgctcaccaagcgaattcaggatttggagcttgagaatacaacaaggctttca
caaaaactgagaagctgccacaatatgcatgaagagagggaaagctgtcaagttctctgt
aatggagagatcacggtggcagactctaatgaaacaaatcaaggggaaaataaaatagaa
tttgatatccattattcgaatgagcaggatctgtctacattatatttggaggataatgat
aaagtaaattttcaatacagtcctggagaagacgatgttgtctcaggttcattgaacatg
tatacaatggtatttggaaatatagactcaagtgtaaagaatattatgcacggatgtcat
gaaatggatcagaaaactactttgggtcaagccaatattgaaaatgaacctttggcaaaa
ctagatactgtatctggacaaacagaagctggtaactgtctgatagacggcagcagtaaa
ttttgtcaagtgtctgacatacaagatgatcatgtcaggaaaaagacaaaagacaacaaa
aaacagagtgtatctcattgtggaaggagatatgtggctcttaaaattatgtattttgga
cagaggttttatggctttgcatcagaggccaacatggagcccactattgagtctgaactt
tttgcagcatttgagaaaaatagactgttagttggagatctcagtgaggctcaatacact
cgatgtggtcggacagacaaaggtgtttcatcctttggacaggtgattgcactctattta
cggtcaaatcataaaactctggccagtgggacagactccaaggacctagaaaacatctct
gatgaaaacgaaattgattatgttagggtattgaacagagcacttcctagtgatattcgt
gttcttggttggtctcctgtacccgatcacttccatgcaaggtttagctgtttgagtaga
gaatataagtactactttttgcgtgagaaccttgatatattgggaatggaagttgcatgt
aagaagtttctgggagaacatgactttcggaatttctgtaagatggatgcactgaatgtg
cataattataagcggcagatctcaagttttaaaattgttccctgtgatgaaaggtgggct
ggcaaagaaataatggcaatgtggatcaagggaagtgcatttctctggcaccaagttcga
tgcatggctgctgtgctatttatgattggtcagggaatggaatcaccaactgtgattgat
gaactgctagacaccaataagacgtgtagaaaaccacaatataaaatggcatccgactta
cctcttgttcttcaaacatgtgaatttggaggactcaatttcaggtgctcatctgatgca
gctaggatcttgcatttgcacatggaacagcaacttgacacttcccttctacaagctgca
atctttcatgaagctttatcccaactccctgattatgcaaccacaagtgacacattgctg
ttaaagcggggaagaaagaagctatcacatgttcctctcagtcttcgtcctactgaacgt
tttgatggaccaaactgtgtacttgttcaatcgatttcagtgctctctacttatgaactt
atctttgtttacctaccaacttataaagtttttggaaggctatgtttagtttcatttcaa
atatatttaaagctatattatttttattttattattgaccttatgtactatttttaa
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