Cryptomeria japonica (Japanese cedar): 131060385
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Entry
131060385 CDS
T10556
Name
(RefSeq) xanthine dehydrogenase 1 isoform X1
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00230
Purine metabolism
cjf00232
Caffeine metabolism
cjf01100
Metabolic pathways
cjf01110
Biosynthesis of secondary metabolites
cjf01232
Nucleotide metabolism
cjf04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
131060385
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
131060385
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
131060385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjf04147
]
131060385
Enzymes [BR:
cjf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
131060385
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
131060385
Exosome [BR:
cjf04147
]
Exosomal proteins
Exosomal proteins of breast milk
131060385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
FAD_binding_5
Fer2_2
CO_deh_flav_C
Ald_Xan_dh_C
Fer2
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-GeneID:
131060385
NCBI-ProteinID:
XP_057849571
LinkDB
All DBs
Position
4:491408524..491681384
Genome browser
AA seq
1367 aa
AA seq
DB search
MGSLKDDSNFFETQMKTEEPILYVNGKRRLLSDGLAHLTLLEYLRGLGLTGTKLGCGEGG
CGACTVMVSHYDPLKRKSIHRAVNACLAPLYSVEGMHVITVEGIGNRQLGLHPVQEILCN
SHGSQCGFCTPGFVMSMYALLRSSKEPPTQEQIEESLAGNLCRCTGYRPILDAFRVFAKT
DNSLYINCDTLSKFKDAKVICPSTGRPCECGARDGNDSSACGTLRPFSKSLSYSEIDGSY
YSECELIFPSELVSRKPHSLYLKGSRDMMWFRPLKLQDVLDLKSRFPEAKLLVGNTEIGI
ETKFKSMFYQVIIATTHVPELNILRVKDSGLEIGASVTLTELLDTLKHCVAERDEHETSA
CSAFLEQLRWFAGCQIRNVASVGGNICTASPISDLNPLWMAARAQFNIIDTKGNMRTVFA
REFFKGYRKVDLRSGEILLSVFLPFTKPGEYVKEFKQAHRRDDDIALVNAAMRVVLEQKG
HAWSVIDASIVYGGVAPVPLSAVKTETFLKGKPWTSETLQCALQVLKEDIIIAENAPGGM
VEFRQSLTASFFFKFFLLISYNIQQKTQVLQGFPDSYKSAVDPYKRPSSYGVQSHESLQK
GTSVGLPVTHLAAKLQVTGEAEYADDVPMPYNGLHAALVLSKKPHARICFIDDSAAKLVP
GFEGFFKSKDVPGGNDIGAVINDEELFASKFVTCVGQVIGIVVADTHENAKTASQKVHVE
YEELPAVLCIKDALKVGSFHPNTEKILQKGDVSECFNSGVCQKIVEGEVQIGGQEHFYLE
PNSTLIWTADGGNEVHMVSSTQAPQKHQKFVSHVLGLPMNKVVCKAKRLGGGFGGKETRS
AFLAAAAAVPSYLLRRPVRITLDRDIDMMTTGQRHAFLGKYKVGFSEEGKVLALDLEIYN
NGGNSLDLSLAVLERAMFHSDNVYVIENVRIRGKVCFTHIPSNTAFRGFGGPQGMFITEN
WIEHIARELGKRPEEIKEQNFHKEGHVLHYGQKLEQCRLQQVWNALKVSCDFNVAHLEVD
KFNSLNRWKKRGIAMVPTKFGISFTTKFMNQAGALVQVYTDGTVLVTHGGVEMGQGLHTK
VAQIAASAFNVPVSCVFISETSTDKVPNSSPTAASASSDMYGAAVLDACEQIKSRMEPIA
SKNKHALFAEIANACHLERIDLSAHGFYATPDIGFDWKSGKGKPFSYYTFGAAYAEVEVD
TLTGDFHLREADIVMDLGNSLNPAIDIGQIEGGFVQGIGLFALEEVKWGDPAHQWIRPGY
LFTQGPGTYKLPTVNDIPLKFKVSLLQDAPNPKAIHSSKAVGEPPLFLASAAFFAIKDAI
SAAREEAGNEGWFVLDSPATPERIRMACPDEFTKPFADSEFRAKLSV
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgggatctttgaaagacgattctaatttcttcgagacacagatgaaaacggaagagcct
attttgtacgttaatggaaagcgccgactgctcagcgacggattggctcatcttactctt
ctcgaatatttaagagggttgggtctgacaggaacaaaacttgggtgcggagaaggtggt
tgtggggcatgtactgttatggtttctcactatgatccccttaagagaaaatccatccat
cgggcagtcaatgcatgcttggctccattgtattctgtggagggtatgcatgttatcaca
gtggagggcattggaaatcgacaacttggtttgcatccagtgcaggaaattctgtgtaac
agtcatggatcacaatgtggattctgtacaccaggctttgtcatgtccatgtatgcattg
ctgaggtctagtaaggaacctcctactcaagaacagattgaagaaagtcttgcaggcaat
ttgtgccgctgcacaggttacaggccaattcttgatgccttccgtgtctttgccaagact
gataattctttgtacatcaattgtgatactctgagcaaattcaaagatgcaaaggttata
tgcccttcaactggaaggccttgtgagtgtggagcaagagatggaaatgatagcagtgct
tgtggaactttgcgtcctttctctaagtcactttcatacagtgaaattgatgggagttat
tatagtgaatgtgaactcattttcccttcagagcttgtatccagaaaacctcactctttg
tatttgaaaggttcacgtgacatgatgtggtttcgtccattgaagcttcaagatgtttta
gacttgaaatcaaggtttcctgaagcaaagctattagttggcaatactgaaattggtata
gaaactaagttcaaaagcatgttttatcaagttatcattgctactactcatgtgcctgag
ctaaatattttgagagtcaaggactctggcctggagataggtgcatcagtaactttgact
gaacttctagacactttaaaacattgtgttgcagaacgtgacgaacatgagacttcagca
tgctcagcctttctggagcagcttagatggtttgctggatgccaaatacgaaatgttgct
tctgttggtggaaacatctgcacagccagtccaatatctgatttaaatcctctttggatg
gcagccagggcacaatttaatataattgacaccaaaggaaacatgaggactgtctttgca
agagaatttttcaaaggctatcgtaaggtggatttgaggagtggagaaatattgttgtca
gtttttctaccatttacaaaaccaggtgaatatgtcaaggagtttaaacaagcacaccgc
agagatgatgacattgcacttgtaaatgcagcaatgagggttgtccttgagcagaaaggt
catgcttggtctgttattgatgcatctattgtctatggtggggttgctccagttccatta
tctgcagtgaagacagagacatttctcaaggggaaaccatggacatctgagacattgcag
tgtgctttgcaagtattgaaagaggatattattattgcagagaatgccccgggaggcatg
gttgagttccgacaatcattaacagcaagtttctttttcaaatttttcctattgatatct
tataacattcagcagaaaacacaagttttgcagggtttcccagattcttacaagtctgct
gtggatccatacaaaaggccatcctcttatggagttcagagtcatgaaagtcttcaaaag
ggaacatcagttggccttcctgtcacgcaccttgcagcaaagcttcaggtgactggtgaa
gcagaatatgctgatgatgtaccaatgccatataatggtttacatgcggccctggtattg
agtaagaagccacatgcacgaatttgttttattgatgactcagcagccaaattagttcct
ggttttgaagggtttttcaaatcaaaggatgtgcctggagggaatgatattggagctgtc
ataaatgatgaggagctgttcgcatcaaaattcgtgacttgtgtgggtcaggtcattggt
attgttgttgctgatacacatgaaaatgcaaagacagcatcccaaaaagtacacgttgag
tatgaggaattgccagcagtcctatgtataaaggatgcccttaaagttggtagttttcat
cccaatactgaaaagatccttcagaagggtgatgttagtgagtgttttaattctggagta
tgccaaaaaatagtagagggagaagtacaaattgggggtcaagagcacttttacttggag
ccaaacagcacattgatatggacagctgatggtggtaatgaagttcacatggtttcttct
acacaagctccacaaaaacatcagaagtttgtgtcccatgttttggggctaccaatgaat
aaggtagtttgcaaggcaaaacgcttaggtggtggttttggaggaaaggagacacggtca
gcatttttagctgctgcagctgctgtaccatcataccttttgcgacgacctgtgaggatc
actctggacagagacattgacatgatgaccacaggacaaaggcatgcttttcttggaaaa
tacaaggtgggattttctgaggagggtaaagtattggcattggatttagaaatatataac
aatggaggaaactcgttagatttgtcgttagcagtccttgagcgtgcaatgtttcattct
gacaatgtgtatgtgatagaaaatgtgagaatcaggggcaaggtttgctttacacatatt
ccaagtaatacagcatttagagggtttggaggacctcaaggaatgtttatcactgaaaac
tggattgaacacattgctagggagcttggaaaaagacctgaagagataaaggaacaaaac
tttcacaaggagggacatgtgcttcattatggtcagaagcttgaacaatgtagattgcag
caagtttggaatgcattaaaagtatcttgtgactttaatgtagctcacttagaggttgat
aaatttaactcactgaatcgttggaaaaagcgtggaatagcgatggttccaacaaagttt
ggtatttctttcacaacaaagtttatgaatcaggcaggagctttggtgcaagtatacaca
gatggaacagttcttgtgacccatggaggtgttgagatgggacaaggacttcataccaag
gttgcacaaattgctgcttcggcttttaatgttcctgtgagctgtgtcttcatttcagaa
acaagcacagacaaggtaccaaattcatcacctacggcagcttccgctagttctgacatg
tatggagcagcagtactagatgcctgtgaacaaatcaagtcacgaatggaaccaattgct
tcaaaaaataagcatgctttatttgctgagattgcaaatgcatgtcatttggagcggatt
gatttgtcagcccatggattttatgcaactcctgacattggctttgactggaaaagtgga
aaaggaaaacccttcagctactacacctttggtgctgcatatgcagaggttgaagttgac
acattaactggagattttcatttgagggaagctgacatagtgatggatttgggaaattct
ttgaatcctgcaatagacattggccagatagaaggaggatttgtgcagggcataggcttg
tttgcccttgaagaggtaaaatggggtgatccagcccatcaatggattagaccaggctat
ctctttacacaaggtccaggcacatacaagctgccaaccgtgaatgatattcctttgaag
ttcaaggtgtcacttttacaggatgctccgaatccaaaagcaatccattcatcaaaggca
gtgggagaacctcctttattcttagcttctgctgcattttttgctatcaaggatgccatc
tcagcagcacgagaagaggcaggaaatgagggatggtttgttcttgatagtccagcaact
ccagagaggatccgaatggcttgcccagatgagtttacaaagccttttgccgattcagaa
tttcgtgccaaattaagtgtttga
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