KEGG   Cryptomeria japonica (Japanese cedar): 131063597
Entry
131063597         CDS       T10556                                 
Name
(RefSeq) ABC transporter I family member 20 isoform X1
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    131063597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjf03019]
    131063597
Messenger RNA biogenesis [BR:cjf03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     131063597
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_23 AAA_29 AAA_25 Arf AAA_15 Zeta_toxin Gp138_N TsaE AAA_22 AAA_30 Auxin_canalis AAA_7 ORC-CDC6-like
Other DBs
NCBI-GeneID: 131063597
NCBI-ProteinID: XP_057853446
LinkDB
Position
4:complement(337085598..337129918)
AA seq 318 aa
MEEKSVTLEVKNLSFTYPGLDGQPPRGAKPLIQDFSLTLRAGDRCLLVGSNGAGKTTILK
LLGGKHMVEPDMIRVLGRSAFHDTSLISSGLLCYLGGEWRRDVAFAGFDVPLQMDVSAEK
MIFGVQGIDPQRRANLIKVLGIDLKWRMHKVSDGQRRRVQICMGLLQSFQVLLLDEITVD
LDVLARADLLTFLKNECKDRGATIVYATHIFDGLADWPSHIAYVAHGKLQLALPLKEVDE
MKELSLMRTVEKWLRKEKEEKKKRQKERKAQGLPEFEDDIEGSRDAGDPARVPIRLLNNG
WAGGRLHSTLAGEDPYNI
NT seq 957 nt   +upstreamnt  +downstreamnt
atggaagaaaagagcgtgacgttggaggtaaaaaatctgagcttcacatatccaggctta
gatgggcaacccccacgtggagcaaagcctcttatacaggatttttctctcactctcagg
gctggtgatcgttgtcttctggtgggctcaaatggagcagggaagaccaccattttgaaa
ttactgggagggaagcacatggtcgaaccggacatgattcgagtcctggggagatctgcg
tttcatgacacttcattgatttcatctggccttctatgctatttgggaggagagtggaga
agagatgttgcatttgctggttttgatgtccccttacaaatggacgtttcagcagagaaa
atgatatttggggttcaaggcattgatcctcaaaggagagccaaccttataaaggtgctg
ggcattgatctaaaatggcggatgcacaaggtatcagatggccaaagaagacgtgtgcag
atttgtatgggtcttctacaatcctttcaggttcttcttttagatgagattacagttgac
ctagatgtacttgcaagggctgatctcttgacattcttaaagaacgaatgtaaagataga
ggagccacaattgtctatgctacacatatctttgatggcctcgctgattggccttcacac
attgcatatgttgcacatggaaaacttcagttagcattgccattaaaagaagttgatgaa
atgaaagagctctctcttatgagaacagtagagaaatggctaaggaaagagaaagaagag
aaaaagaagcgtcaaaaggagagaaaggcccaaggtctcccagagtttgaagatgatatt
gaaggcagtcgtgatgctggggatccagccagggttcctattcgactactgaataatggt
tgggctggagggagacttcattccactctggctggtgaagatccttataatatttag

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