Cryptomeria japonica (Japanese cedar): 131071687
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Entry
131071687 CDS
T10556
Name
(RefSeq) 5'-3' exoribonuclease 4 isoform X1
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04016
MAPK signaling pathway - plant
Brite
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
131071687
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NCBI-GeneID:
131071687
NCBI-ProteinID:
XP_057863611
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Position
10:386401791..386533925
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AA seq
994 aa
AA seq
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MGVPAFFRWLSDKYPLVIMDVVEDNIDDSNDASKPNPNGFEFDNLYLDMNGIIHPCFHPE
NSPVPSSYNEVFKNMFDYIDRIFFIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAQDAA
KAAAEEESLRKEFEAAGKVLASKKMSEASDSNVITPGTEFMATLSIALQYYIHLRLNFDS
GWKNTKVILSDANAPGEGEHKIMSYIRLQRNLPQFNPNTRHCLYGLDADLIMLALATHEI
HFSILREVVTFPGQQDKCFLCGQIGHLAAECEGIPNPKPEELAEDGTEKSSIPKKPYQFL
NIWTLREYLDYDLKIPNPPFEVDFERLVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLM
HIYKKEFGQMGGYLTDAGEVNLRSVEHFIQSVGSYEDNIFQKRARIQQAQENNDALKLKM
KNLSISDSDQLQEDKVKLGEPGWKERYYAEKFGEKTPQEIEEVKEDVVLKYTEGLCWVMR
YYYQGVCSWQWFYPYHYAPFASDLKGLADLEIIFFPGKPFKPLDQLMSTLPASSAKALPE
QYRSLMTDPKSPIMDFYPTDFEIDMNGKRFAWQGIVKLPFIDETRLLSETRKVECTLTEE
EACRNSFKWDLLFVHISHALTPYIISVYKCAYHLSKDERFKIKEEIDVRARLVSDGMNGF
LSPCEGYPCPPSFPSPIKGMQDIDSNQALHVSYLNPPPHRHIPSPPEGAIIPTKTITEQD
IKQTPILWHEDNGQRQRFRERPPVPGAISGPHLGEAAHRLLMNTLQIKSSNSRNAQPAQH
LTPQTSRNSPGILTMPSSYQGTMRSKPRPAGPPGYEQGFAPYESWPKSVGPPTYQHSFIM
SGSPNSHTVTHSNLQNNDQDCIATSSASFPGYQGMQDQMQPAFSANGCYPQTISPIMTNG
DMHFPQVQGVNLQQYGIYQGSPSYANSQQHYQIQNIQRNDPPLPPQTWFSGRGTSNTHLY
SSTQDVAPLYNDGSSVHHGRGRVGPPWSMGSGRH
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttccggcatttttccgatggttatctgacaagtatccacttgtaatcatggat
gtggtggaggataatatcgatgacagcaatgatgcttctaaacccaacccgaatggtttt
gagtttgacaacctttatttggacatgaatggaataatacatccctgctttcatccagag
aactctcctgtaccatcatcatataatgaagtcttcaagaacatgtttgattacatagat
cgtatcttttttatagtgaggccaaggaagcttttgtatatggcaattgatggtgttgcg
ccgagggctaagatgaatcaacaacgttcacggcgttttagggctgcacaagatgcagcc
aaagcagctgcagaagaagaaagtttgagaaaagagtttgaggccgcaggtaaagttctg
gcctcaaaaaagatgtcagaagccagtgactcaaatgtgattacccctggaacagaattt
atggcaacactatctattgctcttcagtactacatacatcttagactaaactttgactct
ggatggaaaaatacaaaggttatactttccgatgcaaatgctcctggtgaaggagaacac
aaaatcatgtcttatattcgtctccaaagaaatcttcctcaatttaatccaaatacaagg
cactgtttatatggattagatgcagatttaatcatgctggcattggcaactcatgaaatc
cacttttcaattttaagagaggttgtcacttttcctggtcagcaagataaatgcttcctt
tgtggtcaaattgggcatttggcagctgaatgtgagggaataccaaatccaaaaccagaa
gaattggctgaagatggcactgagaaaagttccattcctaaaaagccctatcagttcctc
aacatctggaccttgcgagagtacctagactatgacctaaagataccaaaccctccattc
gaggtagactttgagcggctggtggacgactttgttttcatgtgtttctttgtaggaaat
gattttcttccacacatgcctacgttagaaattcgtgagggtgcaatcaacttgctgatg
catatatacaaaaaagaatttggtcaaatgggtggatatttgacggacgctggtgaggta
aatttaaggagtgtggaacattttattcaatcagttggctcatatgaggataacattttt
cagaagcgagctcgtatccaacaggcacaagagaataatgatgcattgaaattgaaaatg
aagaatttaagtatttcagattcagatcaactccaggaggataaggttaaattaggagaa
cctggttggaaagaaaggtattatgctgaaaaatttggagaaaaaacaccacaggaaatt
gaagaagttaaggaagatgttgtcttgaaatatacagaaggcctttgctgggttatgcgc
tactattatcaaggagtatgctcatggcagtggttttatccctatcattatgctccgttt
gcttctgatctaaagggtctggctgatttggaaattatcttttttcctgggaagccattc
aaaccattggatcagcttatgagcacacttcctgcttcaagtgcgaaggcacttcctgaa
cagtataggtctctcatgacggatccaaagtcaccaattatggacttttaccctaccgat
tttgagatagatatgaacggtaaacgctttgcttggcagggtattgttaaattgcccttt
attgatgaaacacgacttctttcagagactagaaaggttgaatgcactttaacggaggag
gaagcttgcagaaatagttttaaatgggatttgctttttgtgcatattagtcatgccttg
actccatatattatttccgtctataaatgtgcttatcatctttcaaaagatgagagattc
aaaatcaaagaagaaatcgacgtcagagccaggttggtcagtgatggaatgaatggcttt
ttgagtccctgtgaaggatatccttgtccacccagtttcccttcacccattaagggcatg
caagatattgattccaatcaagcactgcatgtatcataccttaatccacccccgcataga
cacattccaagtccacctgagggagcaatcataccaacaaaaactataactgaacaagat
ataaagcaaacaccaattttatggcatgaggataatggccaaaggcaacggtttcgagaa
aggccacctgttcctggggcgatttcaggtcctcatctaggagaggcagctcatcgtctc
ttgatgaatacactacagataaagagtagcaactcaaggaatgcacagcctgcgcagcat
ctgacaccacaaacttcacgtaactcacctggtatacttacgatgccctcatcatatcag
ggtactatgagatccaagccaaggccagctggacctccaggctatgagcaggggtttgct
ccttatgaatcctggccgaagtcagttggccctcctacctatcaacatagctttatcatg
tctggatcaccaaattctcatactgtgacacacagcaaccttcagaataatgaccaggat
tgcattgccacttcctcagcatcatttcctggataccagggaatgcaagaccaaatgcag
cctgctttttctgccaatggatgttaccctcaaaccatttctccaatcatgactaatggg
gatatgcactttcctcaagtccaaggtgtcaatctacaacaatatggaatatatcagggt
agccccagttatgcaaactctcaacaacattatcaaattcaaaatattcagagaaatgat
cctccattgccaccgcaaacatggttttctggcagaggaactagtaacacacatctctat
tcaagtactcaagatgtggcacctttgtataatgatggaagtagtgtccatcatggaaga
ggaagggttggccctccatggtcaatgggttctggtcgccattaa
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