Cryptomeria japonica (Japanese cedar): 131075584
Help
Entry
131075584 CDS
T10556
Name
(RefSeq) probable CoA ligase CCL8 isoform X1
KO
K18660
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00061
Fatty acid biosynthesis
cjf00280
Valine, leucine and isoleucine degradation
cjf01100
Metabolic pathways
cjf01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
131075584
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
131075584
Enzymes [BR:
cjf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
131075584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF3081
Motif
Other DBs
NCBI-GeneID:
131075584
NCBI-ProteinID:
XP_057868411
LinkDB
All DBs
Position
5:complement(797846580..798048802)
Genome browser
AA seq
601 aa
AA seq
DB search
MHKGFVREQTDNIMEVIKAALRMGCGAQKRLAVAAAQENHSYGQLLASAWQLSNILLEDS
SANTSRDKSIVHANSQSTHSMECNQSTNETELHLISKVKGTSISSLSGARIGIVAKPSAE
FVAGMWATWIGGGVVVPLALSHPETEILYVMDDAKISVIVGTKEYQELLEGIAGKCSVPF
CLIPVFPNLPAYSEPSMSNEFKVGASSMLFEDILANVEKYTTVDGDGAALIVYTSGTTGK
PKGVVHTHASIAAQVQILTEAWEYTPADRFLNCLPLHHVHGLYNALLAPLYAGAVVDFIP
KFSAREVWQRWIDSYPSDGSKAKNAITVFTGVPTMYTRLLQAYELMGMEAQKVAASAAHK
LRLMMCGSSALPHPVMKKWERITGHCLLERYGMTEFVMALSNPLHGPRKVGTVGKPLPGV
QIKIISEPSDNHNEPGTGELCVKSPSMFKEYWRKPQVTKESFGFDGYFKTGDTATIDADG
YCVILGRTNVDILKVGGYKLSALEIEATLLEHPDVVECSVLGIPDTVYGEIICAVVVPKT
EAQRIEANSKPVITIQDLHKWAKERIAPYKIPQTLHVWESLPRNAMGKVNKKELKELLLS
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcataaaggttttgttagagagcaaactgataatatcatggaggtaatcaaagctgca
ttgaggatgggttgtggagcacagaaaagattggcagtagcagctgctcaggagaatcac
agttatggacaacttcttgcttctgcatggcaactttcaaacatattactagaagacagt
tcagctaatactagcagagataaatctattgtacatgctaattctcaatccacccactcc
atggagtgtaaccaaagtacaaatgaaactgaattgcatctgataagtaaagtgaaaggt
acttctatttccagtcttagtggagctcggatagggattgtggcaaagccctcagcagag
tttgtggctgggatgtgggcaacctggatcggtggtggtgttgtggttcccctggctcta
agtcacccagaaacagaaattctctatgttatggatgatgcgaaaatttctgtcattgtg
ggtaccaaggaatatcaggaacttctggaaggcattgcagggaaatgttctgtacccttt
tgtctaattcctgtctttcccaatcttccagcatattctgaaccatctatgtccaatgaa
tttaaggtcggagcttcaagcatgctgtttgaagacatattggcaaatgttgaaaaatat
acaacagtggatggtgatggagctgcattgattgtgtatacaagtggcaccacaggtaaa
cctaaaggtgttgtgcatacgcatgctagtatagctgcacaggttcaaatcctaacggaa
gcatgggaatatacaccagctgatagatttctaaattgcttaccattacatcatgtccat
ggcctttacaatgccctgcttgcacctctctatgcgggtgctgtggtagatttcatcccc
aaattcagtgcaagagaggtatggcagagatggattgactcatatcctagtgatggaagc
aaggctaaaaatgctattactgtttttaccggggttccaacaatgtatactcgattgctt
caagcttatgagttgatgggaatggaagctcaaaaagttgctgcatcagcagcgcacaaa
ctgcgtctcatgatgtgtggttcatcagcacttcctcatcctgttatgaaaaagtgggaa
aggatcacagggcattgtcttttagagcgatatgggatgactgagtttgtgatggctctt
tcgaatcctctccatggtccgcggaaggtgggcacagttggaaaacctcttcctggtgtt
cagatcaaaataatatcagaaccttcagataatcataatgagccaggcacaggtgaactc
tgtgttaaaagcccatccatgttcaaagagtattggagaaagccacaggttacaaaagag
tcgtttggatttgatggttatttcaaaacaggagatacagcaacaatagatgcagatggc
tactgtgtcatcctggggcgtacaaatgtcgatatccttaaggtgggtggatataaattg
tcagcacttgaaatcgaagcaacactattagagcatccagatgtagtggagtgctctgtt
ttggggataccagacacagtctatggagaaatcatatgtgcagtagtagttccaaaaact
gaggcacaaagaatagaagccaattcaaaacctgttattaccattcaggatctccacaaa
tgggccaaagaaagaattgctccttacaagattcctcagacactgcatgtatgggagtca
ttacctcgtaatgctatgggaaaagtgaataaaaaggagctaaaggaattattactaagt
tcatga
DBGET
integrated database retrieval system
