KEGG   Corynebacterium jeddahense: CJEDD_01885
Entry
CJEDD_01885       CDS       T08816                                 
Symbol
casD
Name
(GenBank) CRISPR system Cascade subunit CasD
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
cjh  Corynebacterium jeddahense
Brite
KEGG Orthology (KO) [BR:cjh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cjh02048]
    CJEDD_01885 (casD)
Prokaryotic defense system [BR:cjh02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    CJEDD_01885 (casD)
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: WCZ38000
LinkDB
Position
complement(391855..392541)
AA seq 228 aa
MQSWGDESRFKIRATATTPTKSGIVGLIAAAQGRRRTDEIEDLAALNMAVRVDQSGSLLR
DYQTAQEWQTKPNEPAQLVTRYFLSDAAFLAAVESDDRALLENIAEALRSPAFPLFMGRR
SCPVHPGLVVGVTDSGGEQSLRDHQHWYASAQHKRQSPQQVSLALYRDALAGESGGVPRQ
DVPLSFDPQHRRYGWRDVIRCEDVVLHNPEGKERSSSRDIYFETVMQA
NT seq 687 nt   +upstreamnt  +downstreamnt
atgcaatcatggggcgacgagtctcggttcaagattcgggctacggccaccactccaacc
aaatccggcatcgtgggtctcatcgctgcggcgcagggacgacggcgcacggacgagatc
gaggatctcgcagcactgaacatggcggttcgcgttgaccaatccggcagtctattgcgc
gattatcagacagcgcaggaatggcagaccaagccgaatgaaccagctcagttggttact
cgctacttcctgtccgacgcggcattcctcgccgcagttgagtcagatgaccgggcactg
ctcgagaacatcgccgaagcactaagatcacccgcgtttccgctcttcatgggccgccga
tcgtgcccggtgcacccggggctggtcgttggcgtaaccgatagtggtggtgagcagtcg
ttgcgtgaccaccaacattggtacgcatccgcgcagcacaagaggcagtcaccgcaacag
gtctcgctcgcgttgtaccgcgacgctttagctggcgagtcgggcggcgttccgcgtcag
gatgttcctctctccttcgacccgcaacatcgtcgctacggatggcgtgacgtgattcgg
tgcgaggacgtcgtgctccacaatcctgaaggaaaggaacgatcgtcttcgcgggatatc
tactttgaaacggtgatgcaagcatga

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