Campylobacter jejuni subsp. jejuni 81-176: CJJ81176_0614
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Entry
CJJ81176_0614 CDS
T00461
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cjj
Campylobacter jejuni subsp. jejuni 81-176
Pathway
cjj03030
DNA replication
cjj03410
Base excision repair
cjj03420
Nucleotide excision repair
cjj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cjj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJJ81176_0614 (ligA)
03410 Base excision repair
CJJ81176_0614 (ligA)
03420 Nucleotide excision repair
CJJ81176_0614 (ligA)
03430 Mismatch repair
CJJ81176_0614 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjj03032
]
CJJ81176_0614 (ligA)
03400 DNA repair and recombination proteins [BR:
cjj03400
]
CJJ81176_0614 (ligA)
Enzymes [BR:
cjj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CJJ81176_0614 (ligA)
DNA replication proteins [BR:
cjj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CJJ81176_0614 (ligA)
DNA repair and recombination proteins [BR:
cjj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CJJ81176_0614 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJJ81176_0614 (ligA)
MMR (mismatch excision repair)
DNA ligase
CJJ81176_0614 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CJJ81176_0614 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
PTCB-BRCT
Nlig-Ia
BRCT_2
RPA_interact_C
Motif
Other DBs
NCBI-ProteinID:
EAQ73015
UniProt:
A1VYU6
LinkDB
All DBs
Position
542220..544163
Genome browser
AA seq
647 aa
AA seq
DB search
MKKEEYLEKVALANLWMRAYYEKDEPLASDEEYDVLIRELRVFEEQNKDEISKDSPTQKI
APTIQSEFKKIAHLKRMWSMEDVFDESELRAWAKRAKCEKNFFIEPKFDGASLNLLYENG
KLVSGATRGDGEVGEDITLNVFEIENIPKNIAYKERIEIRGEVVILKDDFEKINEKRALL
NQSLFANPRNAASGSLRQLDTSITKERNLKFYPWGVGENTLNFTKHSEVMQFIRELGFLK
DDFIKLCANLDEVLKAYDELLALREKKPMMMDGMVVRIDDLALCEELGYTVKFPKFMAAF
KFPALEKTTRLIGVNLQVGRSGVITPVAVLEPVNLDGVVVKSATLHNFDEIARLDVKIND
FVSVIRSGDVIPKITKVFKDRREGLEMEISRPKLCPTCQSELLDEGTLIKCQNIDCEDRL
VNSIIHFVSKKCLNIDGLGENIVELLYKHKKITTLESIFHLKFSDFEGLEGFKEKKINNL
LNAIEQARECELFRFITALGIEHIGEVAAKKLSLSFGKEWHKQSFEAYANLEGFGEQMAL
SLCEFTRVNHVRIDEFYKLLNLKIEKLEIKSDGVIFGKTFVITGTLSRPRDEFKALIEKL
GGKVSSSVSKKTDYVLFGEEAGSKLIKAKELEVKCIDESAFNELVKE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaagagtatttagaaaaagttgctttagccaatttgtggatgagggcatat
tatgaaaaagatgaacccttggctagcgatgaagaatacgatgttttaatcagagaatta
agagtttttgaagaacaaaataaagatgaaatttcaaaagactctccaacgcaaaaaata
gcccctactatacaaagcgagtttaaaaaaatagctcatttaaagcgtatgtggtcgatg
gaagatgtgtttgatgagagtgagcttagggcttgggcaaaacgcgcaaaatgtgaaaaa
aacttttttatagagcctaaatttgatggagcgagtttaaatttgctttatgaaaatggt
aaattagtaagcggtgccactaggggcgatggcgaagtgggtgaggatataacgcttaat
gtttttgagatagaaaatatacctaaaaatatagcctataaagaaaggatagaaattcgt
ggagaagtggtgattttaaaagatgattttgagaaaatcaacgaaaaaagagccctttta
aatcaaagtttatttgccaatccacgcaatgctgcaagcgggagtttaaggcagcttgat
acaagcatcactaaagaaagaaatttgaaattttatccttggggagtaggggaaaatacc
ttaaatttcaccaagcatagcgaggtgatgcaatttatcagagagcttggttttttaaaa
gatgattttattaagctttgtgctaatttagatgaggttttaaaagcttatgatgagctt
ttagctctaagagaaaaaaagcctatgatgatggatggaatggtggtaagaattgatgat
cttgcactttgtgaagaattaggttatacggtaaaatttccaaaatttatggcagctttt
aaatttcctgcacttgaaaaaaccacgcgtttaataggtgtaaatttacaagtgggaaga
agtggagtgatcactcctgtggcggttttagaacctgtaaatttagatggggttgtagta
aaatcagccacactccataattttgatgagattgcaagacttgatgttaaaatcaatgat
tttgtaagcgtgataagaagtggcgatgttatccctaaaatcactaaggtttttaaagat
cgtagagaaggtttagagatggaaatttcacgccctaagctttgtcctacttgccaaagt
gagcttttggatgaaggaactttaataaaatgtcaaaatatagactgtgaagatagactt
gtaaattctatcattcattttgtttctaaaaaatgtcttaatatcgacgggcttggagaa
aatatagtagagcttttatacaaacacaaaaaaatcactactcttgagagcatttttcat
ttaaaatttagtgattttgaaggtttggaaggctttaaggaaaagaaaattaacaatctt
ttaaatgctatagaacaagcaagagagtgtgagctttttcgttttatcacagctttagga
atagagcatattggcgaggttgcggctaaaaaattaagcttaagttttggtaaagagtgg
cacaagcaaagctttgaagcttatgccaatttagaaggttttggagagcaaatggcttta
agtctttgcgaatttacgcgtgttaatcatgtaagaattgatgagttttacaagctttta
aatttgaaaatagaaaaacttgaaatcaaaagcgatggcgtgatttttggtaaaactttt
gtgattacaggcactctttcacgcccaagagatgagtttaaggctttaatagaaaagctt
ggaggtaaggtaagtagttcggtttctaaaaagactgactatgtgctttttggagaagag
gcaggttctaagctgattaaggctaaagagcttgaagtaaaatgtatagatgaaagtgct
tttaatgagcttgttaaagaatag
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