Campylobacter jejuni subsp. jejuni 00-1597: PJ17_02840
Help
Entry
PJ17_02840 CDS
T03791
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cjl
Campylobacter jejuni subsp. jejuni 00-1597
Pathway
cjl03030
DNA replication
cjl03410
Base excision repair
cjl03420
Nucleotide excision repair
cjl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cjl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PJ17_02840
03410 Base excision repair
PJ17_02840
03420 Nucleotide excision repair
PJ17_02840
03430 Mismatch repair
PJ17_02840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjl03032
]
PJ17_02840
03400 DNA repair and recombination proteins [BR:
cjl03400
]
PJ17_02840
Enzymes [BR:
cjl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
PJ17_02840
DNA replication proteins [BR:
cjl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PJ17_02840
DNA repair and recombination proteins [BR:
cjl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
PJ17_02840
NER (nucleotide excision repair)
GGR (global genome repair) factors
PJ17_02840
MMR (mismatch excision repair)
DNA ligase
PJ17_02840
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PJ17_02840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
BRCT
PTCB-BRCT
HHH_2
Nlig-Ia
BRCT_2
HHH_5
RPA_interact_C
Motif
Other DBs
NCBI-ProteinID:
AJK70729
LinkDB
All DBs
Position
537930..539873
Genome browser
AA seq
647 aa
AA seq
DB search
MKKEEYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELSVFEEQNKDEISKDSPTQKI
APIIQSEFKKIAHLRRMWSMEDVFDESELRAWAKRAKCEKNFFIEPKFDGASLNLLYENG
KLVSGATRGDGEVGEDITLNVFEIENIPKNIAYKERIEIRGEVVILKDDFEKINEKRALL
NQSLFANPRNAASGSLRQLDTSITKERNLKFYPWGVGENTLNFTKHSEVMQFIRELGFLK
DDFVRLCANLDEVLKAYDELLALREKKPMMMDGMVVRVDDLALCEELGYTVKFPKFMAAF
KFPALEKTTRLIGVNLQVGRSGVITPVAVLEPVNLDGVVVKSATLHNFDEIARLDVKIND
FVSVIRSGDVIPKITKVFKERREGLEMEISRPKLCPTCQSELLDEGTLIKCQNIDCEDRL
VNSIIHFVSKKCLNIDGLGENIVELLYKHKKITTLESIFHLKFSDFEGLEGFKEKKINNL
LNAIEQARECELFRFITALGIEHIGEVAAKKLSLSFGKEWHKQSFEAYANLEGFGEQMAL
SLCEFTRVNHTRIDEFYKLLNLKIEKLEIKSDSMIFGKTFVITGTLSRPRDEFKALIEKL
GGKVSGSVSKKTDYVLFGEEAGSKLSKAKELEVKCINESAFNELVKE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaagagtatttagaaaaagttgctttagcaaatttgtggatgagggcatat
tatgaaaaagatgaacccttggctagcgatgaagaatacgatgctttaatcagagaatta
agtgtttttgaagaacaaaacaaagatgaaatttcaaaagactctccaacgcaaaaaata
gctcctatcatacaaagcgagtttaaaaaaatagctcatttaaggcgtatgtggtcgatg
gaagatgtgtttgatgagagtgagcttagggcttgggcaaaacgcgcaaaatgtgaaaaa
aacttttttatagagcctaaatttgatggagcgagtttaaatttactttatgaaaatggt
aaattagtaagcggtgccactaggggcgatggcgaagtgggtgaggatataacgcttaat
gtttttgagatagaaaatatacctaaaaatatagcctataaagaaaggatagaaattcgt
ggagaagtggtgattttaaaagatgattttgagaaaatcaacgaaaaaagagccctttta
aatcaaagtttatttgctaatccacgcaatgctgcaagcgggagtttaaggcagcttgat
acaagcatcactaaagaaagaaatttgaaattttatccttggggagtaggggaaaatacc
ttaaatttcaccaaacacagcgaggtgatgcaatttatcagagagcttggttttttaaaa
gatgattttgtaagactttgcgctaatttagacgaagttttaaaagcttatgatgagctt
ttagctctaagagaaaaaaaacctatgatgatggatggaatggtggtaagagttgatgat
cttgcactttgtgaagaattaggctatacggtaaaatttccaaaatttatggcagctttt
aaatttcctgcacttgaaaaaaccacgcgtttaataggggtaaatttacaagtaggaaga
agtggagtgatcactcctgtggcggttttagaacctgtaaatttagatggggttgtagta
aaatcagccacccttcataattttgatgaaattgcaagacttgatgttaaaatcaatgat
tttgtaagcgtgataagaagtggtgatgttattcctaagatcactaaggtttttaaagag
cgtagagaaggtttagagatggaaatttcacgccctaaactttgtcctacttgccaaagt
gagcttttggatgaaggaactttaataaaatgtcaaaatatagattgtgaagatagactt
gtaaattctatcattcattttgtttctaaaaaatgtcttaatatcgacggacttggagaa
aatatagtagaacttttatacaagcacaaaaaaatcactacgcttgagagcatttttcat
ttaaaatttagtgattttgaaggtttggaaggctttaaagaaaagaaaatcaacaatctt
ttaaatgccatagagcaagccagagaatgtgagctttttcgttttatcacggctttaggg
atagagcatattggcgaggttgcggctaaaaaattaagtttaagttttggtaaagagtgg
cacaagcaaagctttgaagcttatgccaatttagaaggttttggagagcaaatggcttta
agtctttgcgaatttacgcgtgttaatcatacaagaattgatgaattttacaagctttta
aatttgaaaatagaaaaacttgaaatcaaaagtgatagtatgatttttggtaaaactttt
gtgattacaggtactctttcacgtccaagagatgagtttaaggctttgatagaaaagctt
gggggtaaggtaagcggctctgtttctaaaaagactgactatgtgctttttggagaagag
gcaggttctaaacttagcaaggctaaagagcttgaagtaaaatgtataaatgaaagtgct
tttaatgagcttgttaaagaatag
DBGET
integrated database retrieval system
