Coturnix japonica (Japanese quail): 107308386
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Entry
107308386 CDS
T04297
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjo04040
]
107308386 (TRPC6)
Ion channels [BR:
cjo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107308386 (TRPC6)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Cas8b_C
Motif
Other DBs
NCBI-GeneID:
107308386
NCBI-ProteinID:
XP_015707741
UniProt:
A0A8C2STN9
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Position
1:163676510..163758235
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AA seq
895 aa
AA seq
DB search
MSQTQPYGPRNGGSPAAGARRNDSQDYLLLDAEPSDDSALPPYAFYPVRGNENRLALRRQ
TILREKGRRQASRGPAYMFNDHSTSLSLEEERFLDAAEYGNIPVIRKMLEECPSLNVNCV
DYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAILNHPAFAEG
KRLALSPSQSELQHDDFYAYDEDGTRFSHDVTPIILAAHCHEYEIVYTLLRKGARIDRPH
DYFCKCSECNQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELARLAN
IEKEFKNDYKKLSMQCKDFVVGVLDLCRDTEEVEAILNGDVETSHSSNGEHSRPSLSRLK
LAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLAVLAVPVGLPFLAMAYWIA
PCSKLGRIMRGPFMKFVAHAASFTIFLGLLVMNAADRFDGTKLRPNETTGNVKQLFRMKT
SCFSWMEMLIISWVIGMIWSECKEIWSQGPKEYLFELWNMLDFGMLAIFAASFIARFMAF
WHASRAQNLVDANMKDLSSPTLEPNIKYYTLARINWDPSDPQIISEGLYAIAVVLSFSRI
AYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYLGAKQNEAFTT
VEESFKTLFWAIFGLSEVKSVVINYKHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSS
FQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLLYLLLRLKKWITKPFMC
QKKSFQEDAEMNKLGQRKQSSIRSSDEIHLNSFNNPPRQYQKIMKRLIKRYVLKAQIDKE
SDEVNEGELKEIKQDISSLRYELLEEKSQNSEDLAELIRKLGEKLSINSKEESKR
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaacgcagccctacggtccccggaacggcggctccccggcggccggcgcccgg
aggaacgacagccaggactacctgctgctggacgccgagccgagcgacgacagcgccctg
ccgccctacgccttctaccccgtccggggcaacgagaacagactagcgctacgacgacag
accattctccgggagaaggggaggagacaggccagtcgagggccagcatatatgtttaat
gaccactcaacaagtctttctcttgaggaagagcgcttcttggatgcagcagaatatgga
aatatcccagtgattcgcaaaatgctggaagaatgtccctcactcaatgtcaactgtgtg
gactacatggggcagaatgccttgcagctagctgttgctaacgagcacctggagatcaca
gaacttttgctgaaaaaggagaacctatctcgggttggggatgccttgcttttggctatt
agcaaaggttatgttaggatagtagaagctatcctaaaccatcccgcgtttgcagaaggc
aagaggcttgcattaagtcctagccagtcagagctccagcatgatgacttctatgcatat
gatgaagatggaacacggttttctcatgatgttacaccaatcattctggctgctcactgt
catgagtatgagattgtctacactctactgagaaaaggggctcggattgatagaccacat
gactatttctgcaagtgcagtgaatgcaaccagaaacaaaagcatgactctttcagccat
tctaggtccagaatcaatgcctacaaaggtctggccagccctgcttatttgtctttatcc
agtgaagaccctgtaatgactgctttagaattaagcaatgaactggccagactagccaac
attgaaaaagagtttaagaatgattacaagaaattgtctatgcaatgcaaggattttgta
gttggagtccttgatctgtgcagagatacagaagaagtggaagctattttgaatggtgat
gtagagacgagccacagtagtaatggagaacacagtcgccccagccttagccgcttaaaa
ctagcaatcaaatatgaagtaaaaaaatttgtagcacatccaaactgccagcaacaactt
ctctccatctggtatgagaatctgtcaggtttacggcagcagactatggcagtgaagttt
ctggctgttcttgctgttccagtaggactgcctttccttgcaatggcttactggattgct
ccttgcagtaagctgggaaggataatgcgtggaccttttatgaagtttgtagcccatgca
gcttccttcaccatttttcttggtctgcttgtcatgaacgcagctgacagatttgatggc
accaagctccggcccaacgaaactacaggcaacgtaaaacagctgtttagaatgaaaaca
tcctgtttctcatggatggagatgttaattatttcttgggtaataggcatgatatggtct
gaatgtaaagaaatttggtctcaaggtccaaaggaatatctttttgaattatggaatatg
cttgattttggtatgttagcaatttttgcagcatcattcatagcaagatttatggcattt
tggcacgcatccagagcccagaacttggttgatgcaaacatgaaggatctgtcaagtcca
acactggagcccaacataaaatactacaccttagccaggatcaactgggatccatctgat
ccacaaatcatatctgaaggcctttatgcaattgcagtagtgctgagtttctccagaata
gcctatatcttaccagccaatgaaagttttggacccctgcaaatatcacttggcagaact
gtgaaagatatcttcaagttcatggtgatatttatcatggtgtttgtagctttcatgata
ggaatgtttaatctctactcctactacctgggagcgaaacaaaatgaagcatttacaact
gttgaagaaagtttcaagacattgttctgggctatatttggactttcagaagttaaatca
gttgttatcaattataaacacaagttcattgaaaatattggctacgttctttatggagtc
tataatgttaccatggtcattgtcttactgaacatgcttattgccatgatcaatagctcc
ttccaggaaattgaggatgatgctgacgtagaatggaaatttgcaagggctaaactttgg
ttttcttactttgaagaagggaggactcttccagtacccttcaacttagtaccaagtcca
aaatctttgctgtatctcttactcagactcaaaaaatggatcactaaaccattcatgtgc
caaaagaaaagcttccaggaagatgcagagatgaacaagcttggtcaaaggaagcagtca
agtataagaagttctgatgaaatccacttaaacagttttaacaatcctccaagacaatat
cagaaaataatgaagcgtctgattaaaagatatgtactgaaagctcagatcgataaggaa
agtgatgaagtcaatgaaggtgaactgaaggagattaaacaggacatttcaagtctccgg
tatgaactccttgaggaaaaatctcaaaattcagaagatctggcagaacttataaggaaa
cttggggaaaaactgtcaatcaactctaaagaagaaagcaagagataa
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