Coturnix japonica (Japanese quail): 107309479
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Entry
107309479 CDS
T04297
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107309479 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjo03000
]
107309479 (IRF5)
Transcription factors [BR:
cjo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
107309479 (IRF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
107309479
NCBI-ProteinID:
XP_015709847
UniProt:
A0A8C2Y4R8
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All DBs
Position
1:710580..719065
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AA seq
463 aa
AA seq
DB search
MASPVPRRVRLRPWLVAQVDSGRFPGLRWVDARRRLFVIPWHHATRHFPAHSGDDDTVFK
AWAAETGKFLAGRDEPDPAKWKATLRCALNKSREFRLHYDGTRAVPPRPYKVYEVCGADG
ADAVTGDDFSCGGEEEEEEEDVSELQKLMSLSINDCRRDPVPPWPEEHPQFSSTDPTVPF
MPPELPPELTPQLNPQLTPQLPPPGPPALLEHGVPNLLASPHLLPLTDLELRFQYRGRRV
SALTVSHPLGCRLSHGGSLPPTPQRPDLLGHPELQQVPFPDPEGIPHDKQRRYTRTLLGA
MERGLLLELGGQDLYATRLCRCKVFWDGPCAPPQDPHLDPRPNPMERERRVQVFSLQRFL
DGLILFQKGQSPTPPPFEVFLCFGEEWPDHRPKEKKLITVQVVPVAARLLLELFSGELSW
SADSVPLQISQPDLKDALVEQFKELHRLWQQQQRPEPGPQPQL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccccggtgccgcgccgtgttcgcctgcgcccgtggctggtggcccaggtggac
agcgggcgcttcccagggctgcgctgggtggacgcgcggcgccggctctttgtgatccca
tggcaccacgcaacgaggcatttccctgcacacagcggtgacgatgacaccgtcttcaag
gcatgggcagcagagacagggaagttccttgcggggcgggatgagccggatcctgccaag
tggaaggcgacgctgcgctgcgccctaaacaagagccgcgagttccgcctgcactacgac
ggcacccgcgctgtgccaccccggccctataaggtgtacgaggtctgtggggctgacgga
gcagatgcggtgaccggggatgacttcagctgtggtggggaggaagaggaggaggaagag
gatgtcagtgagctgcagaaactgatgtctctgagtatcaatgactgcagaagggatccg
gtgcccccctggcctgaggagcacccccagttcagcagcaccgaccccacagtgcccttc
atgccccctgagctgccccctgagctgaccccacagctgaacccacagctgaccccacag
ctgccccccccgggccccccagcactcttggagcatggtgttcccaacctgctggccagc
cctcacctgctgcccttgacggacctggagctgcgcttccagtaccgcgggcggcgggtg
agcgccctgaccgtcagccaccccctgggctgccgcctctcccatggggggtctctgccc
cccaccccgcagcgccccgacctgctgggacaccccgagctccagcaggtcccgttcccc
gaccccgaggggatcccgcacgacaagcagcgccgttacacccgcaccttgttgggggcc
atggagagggggctgctcctggagctgggggggcaggacctgtacgccacccgcctctgt
cgctgcaaagtgttttgggatgggccttgtgccccaccacaggacccacacctcgacccc
cggcccaaccccatggagagggagaggagggtccaggtgttcagcctccagaggttcctt
gatgggctgatcctgttccagaaggggcagagcccaacgccgccgcccttcgaggtcttc
ctgtgctttggggaggagtggcctgaccacagacccaaggaaaagaagctcatcaccgta
caggtggtgccagtggcggcgcggctgctgctggagctgttctcaggggagctgtcgtgg
tcggctgacagtgtcccgctgcagatctcacagcccgacctgaaggatgctctggtggag
cagttcaaggagctgcaccgcctgtggcagcagcagcagcgcccagaacccggcccacag
ccccagctgtga
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