Coturnix japonica (Japanese quail): 107311930
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Entry
107311930 CDS
T04297
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04115
p53 signaling pathway
cjo04210
Apoptosis
cjo05164
Influenza A
cjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
107311930 (APAF1)
04115 p53 signaling pathway
107311930 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
107311930 (APAF1)
05168 Herpes simplex virus 1 infection
107311930 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
NB-ARC
Beta-prop_EML_2
APAF1_C
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
APAF-1-like_WHD
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
NBCH_WD40
CARD
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_DCAF4
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
CARD_2
PEP5_VPS11_N
WD40_like
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_WDR11_2nd
AAA_16
AAA_22
Dark_WHD
ATPase_2
Motif
Other DBs
NCBI-GeneID:
107311930
NCBI-ProteinID:
XP_015714344
LinkDB
All DBs
Position
1:42511598..42537256
Genome browser
AA seq
1249 aa
AA seq
DB search
MDAKSRMCLIMNRQALEKDIKTSYIMDCMVADQVLTLQEEEKVKQQNTQKERAAMLINTL
LTKDNNAYRSFYNALLHEGYRDLAALLQDGIPVFSSRNGKNAMDEMTSYVKTTLCEGGVP
QRPVVFVTRPKLVEAIKQKLCSLGNDPGWVTVYGMAGCGKTVLTAEALRDHQLLEGYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEQDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
VLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVSGNKYEIHVESGLTHEKGLEVLALFVN
MKISELPEQANCIIRECKGSPLVISLIGALLRDFPSRWEYYLKQLQNKQFKRIRKSSSYD
YEALDEAMSISVEQLSNDLKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGNSFHYYLHDLQLDFLTEQNRNQLQELHKNIVNQYKKYYKLHVPVLSQEDC
MYWYNFLAYHMAGANMQKELRDLMFSLDWIKAKTELVGPAHLIHEYVEYSSVLDQKDTII
RENFQEFLSLNGHLLGRQPFPDITQLGLCQPEASEVYQQAKLRAQRETGTFYLEWINKKS
LKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILC
CTFSADDKYVATCSADKKVKIWNSRTGECLYVYEEHTEQVNCCQFNNRRGQYLLATCSDD
TYIKLWDLKEKYCRNTMFGHINAVSHCRFSPNDDYIASCSTDGTVKLWDVRSANELKTIE
IKDFFRNADEHQDEVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTCNLLTQVIISHHST
IQYCDFCAGDELVAVALSHCSIELWNMKSLSKVADCRGHMSWVHCVAFSSDGSLFLTSSE
DQTIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKHIQLINGNTDSIIMQTEP
QESLICCCCLSEDLKFAAFGQENGAIKVLQLLDGRFLASREAYRTSVQHCRFTTDCQTLI
SSAHDAVIQVWNWQLNECVFLRGHEEAIKDFALLENSKLLSWSFDGTVKVWNITTGKTEK
DFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPNN
KLLATGDDKGDIRIWDILTGELLHFCSSVTVDEGEPTHGGWVTALSFSPDSKMLVSSGGY
LKWWDVTTGESLQTFYTNGTNLKSIHVSPSFEVYVTVDNLGILYVLRKL
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgaagagtagaatgtgtttaattatgaatcgtcaagcactggagaaagacatc
aaaacctcttacattatggactgtatggttgctgaccaagtcctgacattgcaggaggag
gagaaagtgaaacaacagaatacacagaaggagcgagcagctatgctaataaatactctt
cttaccaaagacaacaacgcatatagatctttttataatgcactgcttcatgaagggtac
cgagatcttgctgcgcttcttcaggatggcatccctgtcttctcctccaggaatggaaag
aatgccatggatgagatgacttcatatgttaagacaactctctgcgaaggaggtgtacca
cagagaccagttgtgtttgtgactcggccgaagctggtagaagctattaaacagaaactg
tgcagcttaggaaatgatccaggctgggtgacagtttatgggatggcgggttgcggaaag
actgttttaacagcagaagctttaagggatcaccaactcttggaaggttattttccagga
ggagttcactggatctctgtgggaaaacaggacaaagcagggctccttataaaactacag
aatctctgtagtagattagagcaggactctactctttcacagagaccaccacttaacatc
gaggaggccaaagatcgtcttcgtttgctgatgctgcgcaaatacccgaggtctcttttg
gtcctggatgatatttgggattcctgggtactaaaagcatttgataatcaatgtcaggtt
ctaatcaccagcagggacaggagcgtgacagatgctgtgtctggcaataagtatgagatt
catgtggaaagtggactaacacacgagaaaggactggaggttttagccctgtttgtgaac
atgaaaatatcagaactgccagaacaagctaactgcattataagggaatgcaaaggttct
cctcttgtgatatccttgataggtgcattactccgagatttccctagtcgctgggaatat
tatcttaaacagttgcagaataagcagtttaagagaataagaaaatcttcatcttatgac
tatgaagcccttgatgaagcaatgtccataagtgtagagcaactgagtaatgatttaaaa
gattactataaagacctctccatcctcccaaaagatgttaaagtgcctactaaggtgctc
tgtattctttgggatatggaaaccgaggaagttgaagatatactgcaagaatttgttaac
aaatcattattgttctgtgatcgtaatgggaattcatttcattattatttacatgatctt
caacttgactttcttacagagcagaatcgcaaccagcttcaggaactacataaaaacata
gtaaatcagtacaagaaatattacaagcttcatgtgcctgtgctatctcaagaggactgc
atgtactggtataactttctagcatatcacatggctggtgccaacatgcagaaggaactc
cgtgatcttatgttttctctagactggattaaagctaaaacagaattggtaggaccagct
catctaattcatgaatatgtagaatatagttcagtcctggatcaaaaggataccataata
cgtgagaattttcaggaatttctgtctttaaatgggcacctccttggacgacagcctttt
cctgacattacacagctgggtctttgccaaccagaggcatctgaggtgtatcaacaagcc
aagctacgggctcaaagagaaacgggaacattttacttggaatggataaataaaaaatcc
ttgaaaaacctgtcccgtctggttgttcgtccacatagagatgcagtttaccatgcctgc
ttttctagggatagacaaagaatagcatcatgtggagctgataaaacacttcaggtgttt
aaagcagaaagtggagagagattgctggagataagtgctcatgatgatgaaatactttgc
tgcactttttctgcagatgataaatacgtagcaacttgttcagctgataaaaaggtgaag
atctggaattcaagaacaggcgagtgtttgtacgtatatgaagaacacacagagcaggtc
aattgctgccagttcaataacagaaggggtcagtatcttttagccacctgctcagatgac
acttacatcaaactttgggatctgaaggagaagtattgtaggaatacaatgtttggtcat
ataaacgccgtcagtcactgtagattttcaccaaatgatgactatattgctagctgctca
acagatggaacagtgaagctttgggatgtgcgttcagcaaatgaactgaaaactattgag
ataaaagatttcttcaggaatgcagatgagcaccaggatgaagtggaggttttagtaaaa
tgttgctcttggtccagaagtagtgatacaattctggtggtagccaaaaataagcttttg
ctttttgatgttacaacatgtaacctgttaacacaagtcatcataagtcatcacagtaca
atccagtattgcgacttctgtgctggggatgagttagtagcagttgctttgtctcattgt
tctattgagttatggaatatgaaatccttatcaaaagtagcagattgcaggggacacatg
agctgggttcactgtgtggcattttcctcagatggatctttatttctgacatcttctgag
gaccagacaatacggatttgggaaacaaacaaggtgtgcaagtcttctgatgctgtgcta
aaaagtgaactggatgttgtatttcacaatggtgaagtcatgattttagcaatttacaat
cagaaacatattcagctcattaatggaaatacagacagcattatcatgcagacagaacct
caggaatcccttatttgctgctgttgcttaagtgaagatcttaaatttgcagcatttggg
caggagaatggagcaataaaggtactgcagttgttagatgggagatttctggcatcccgg
gaggcctacaggacatctgtgcagcattgtcgatttaccactgattgtcagactctgatt
tcaagtgctcatgatgcagtcatacaggtctggaattggcagttgaatgagtgcgtgttt
ctaagagggcatgaggaagcaatcaaagactttgcacttctagaaaattcaaagcttctt
tcctggtcatttgatggaacagtgaaggtttggaatatcaccactggaaaaacagaaaaa
gattttgcttgccatagaggtgctgttctttcttgtgctgtctcacctgatggtagtagg
ttttcatctacttctgctgacaaaactgcaaagatatggagctttgaaagttcatctgtt
cttcatgagctgaaaggtcatgaagcctgtgtgcggtgctctgctttctctcctaataac
aaattactggccactggagatgacaaaggagatataaggatttgggacattttaacaggt
gaattacttcacttctgctcctcagttactgtggatgaaggagaaccaacacacggtggt
tgggtaacagccctctcattttctcccgacagtaagatgcttgtgtcatctggaggctat
ctgaagtggtgggatgtaactacgggagaatccttgcaaaccttctacacgaatggaaca
aacctcaagtcaatacacgtgtcccctagttttgaagtgtacgtgactgttgataatctt
ggtattctttatgtattacggaagttgtga
DBGET
integrated database retrieval system
