Coturnix japonica (Japanese quail): 107314187
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Entry
107314187 CDS
T04297
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107314187 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjo03000
]
107314187 (KDM2A)
04121 Ubiquitin system [BR:
cjo04121
]
107314187 (KDM2A)
03036 Chromosome and associated proteins [BR:
cjo03036
]
107314187 (KDM2A)
Enzymes [BR:
cjo01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
107314187 (KDM2A)
Transcription factors [BR:
cjo03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
107314187 (KDM2A)
Ubiquitin system [BR:
cjo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107314187 (KDM2A)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
107314187 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
107314187 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
Motif
Other DBs
NCBI-GeneID:
107314187
NCBI-ProteinID:
XP_015718643
LinkDB
All DBs
Position
5:108716..140657
Genome browser
AA seq
1221 aa
AA seq
DB search
MAAAAPVRGQRRRRDLEEEDDDSSPGVSFSLSSEESEMEPEEERIRYSQRLRGTMRRRYE
DDGISDDEIEGKRTFDLEEKLSTNKFNSTFVIFMEGKDFTVEYIQRGGLRDPLIFRSSDG
LGIKMPDPDFSVNDVRLCVGSRRMVDVMDVNTQRDIEMSMAQWARYYETPEAEREKLYNV
ISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMS
VKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVS
ECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNK
FRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLSMGELLSSPCSSFSHAAADMELSS
SDLVNMEEEEEEDEDAHGKEPRRPITRQSVLTSPVANGANVDYDELGRSCRSSMPTLKKS
PSIDSSDSSRGSQNGQAWEPHGGSPRKSRRVHLTQFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKLLLEEYANSDPRLALTGIPIVQWPKRDKLKLQARLRVRLPTIPITKP
HTMKPTPRPTPIRPTMSPIVSGARRRRVRCRKCKACMQGECGMCHFCKDMKKFGGPGRMK
QSCVLRQCLAPRLPHSVTCALCGEVDQNEDSQDFEKKLMECCICNEIVHPGCLQMDGEGL
LNDELPNCWECPKCYQGDDTEKGQKRKIEESDDDMAQAKVLRPLRSCEEPLTPPPNSPTP
MLQLIHDPVSPRGVVTRSSPGAGPSEHHSASRDERFKRRQLLRLQATERTIVREKENNPS
GKKELSEVEKAKLHGSYLTVTLQRPTKDVHGTSIVPKLQAITASSANLQHSPRVVMRHTP
ARMHPRGGGEDEAAAEEDEEEEDEDDENTEEGGAARLNGRGGRVQEGEESWMQREVWMSV
FRYLTRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKSITPQALSGIIKRQPISLDLSW
TNISKKQLTWLVNRLPGLKDLILAGCSWSAVCALSTSSCPLLRTLDLRWAVGIKDPQIRD
LLTPPTDKPSQDNRSKLRNMIDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCNHLTDQS
ANLLTAVGSSTRNSLTELNMAGCNKLTDQALLYLRRISNVTLIDLRGCKQITRKACEHFI
SDLSINSLYCLSDEKLIQKIS
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctcctgtgagaggacaaaggcgcaggagggacctggaggaagaggac
gacgacagcagccctggagtgtccttctcgctttcttcagaagagtcggagatggagccc
gaggaagaaaggatccgttacagccaaagattacgtggcacaatgcggcggcgttacgag
gatgatggcatatctgatgatgaaattgaagggaagaggacatttgaccttgaggaaaag
ctctctaccaacaagtttaattctaccttcgtcatcttcatggaaggcaaagacttcaca
gttgaatacatccagagaggtggcctgagagaccccctcatcttcaggagctccgatggc
ctgggtataaagatgccagatccggacttcagcgtgaacgatgtgcggctgtgtgttggg
agccggcggatggtggatgtcatggatgtaaacacacagagggacatagagatgtccatg
gcacagtgggcacgctactatgaaacacctgaagctgaacgggagaaactttacaatgtc
atcagcctggagttcagccacaccaaactggagaacctggtgcagagacctgctacggtg
gatctgattgactgggttgataacatgtggcccaggcacctgaaggagagtcagacagag
tctacgaatgctattttagaaatgcagtatccaaaagtacagaagtactgtctgatgagt
gtcaagggctgctacactgattttcatgtggactttggtggtacttctgtgtggtaccac
atccaccgaggaggaaagatcttctggttgatccctcctacaccccagaacctggagctc
tatgaaaactggcttctctcagggaagcagggagacatatttcttggggacagagtgtca
gagtgccagcgcatcgagctcaagcagggttatacatttgtcatcccctcaggttggatc
catgctgtgtacactcccatggacacgctggtttttggaggcaacttcttgcacagcttc
aacatccctatgcagctccggatctacagcattgaagaccgcacgcgggtcccaaacaag
tttcgttatcccttctattatgagatgtgttggtatgtgctagagcgctatgtctactgc
atcaccagccgttcccatctcaccaaggacttccagaaggaatcactcagcatgggtgag
ctcctctccagcccctgctcctccttctcgcatgctgctgcagacatggagctgagctcc
tcagacttagtaaacatggaggaagaggaggaggaagatgaggatgcgcatgggaaggaa
ccaaggagaccaatcacgagacagtctgttcttaccagtcctgtagccaatggtgccaat
gtggactacgatgaactgggcaggagctgccggagcagcatgccaactctgaagaagagc
ccatctatagactcctctgactctagccggggctcccagaatggccaggcctgggagcca
catggtggcagtccacgcaagagcaggagggtgcacctgacacagtttgagctggagggg
ctgcgctgcctggtagacaagctagagtcactccctctgcacaagaagtgcgttcctacc
ggcatcgaggacgaggacgctctcatcgctgatgtcaagttgctactagaggaatacgca
aacagtgaccccagactggcacttacaggcatccccattgtccagtggcccaagagagac
aagctaaagctgcaggcccggctgagagtgcgcctgcccaccatccccatcaccaagcct
cacaccatgaagccaacccctcgcccaacacccatcaggcccacaatgtcccccatcgtg
tcaggtgcccgccggaggcgtgtgcgctgcaggaaatgcaaggcctgcatgcaaggcgag
tgtggcatgtgtcacttctgcaaggacatgaagaagtttggggggcctggcaggatgaag
cagtcctgtgtcctacggcagtgcttagcacccaggctgcctcactcagtcacatgtgcg
ctttgcggggaggtggatcagaatgaagactcacaggactttgagaagaagctcatggag
tgctgcatctgcaatgagattgttcaccctggctgcctgcagatggatggggaagggctg
ctcaatgacgagctccccaactgctgggaatgtcccaaatgctaccagggtgatgacaca
gagaagggccagaagcgcaagatagaagagagcgatgatgacatggcacaagccaaggtg
ctgcggcccctgcggagttgtgaggagcccctgaccccaccacccaactcgcccaccccc
atgctccagctgatccatgacccggtgtcaccacgaggtgtggtaacgcgctcgtcccca
ggtgccggtcccagcgagcaccacagtgccagcagggatgagcgattcaagcggcgccag
cttctgcggctccaggccaccgagcgaaccattgtgcgggagaaagagaacaaccccagt
ggcaaaaaggagctgtcggaggtggagaaggccaagctgcatggctcctacctcaccgtg
acgctccagcgtcccaccaaagatgtccatggcacttccattgtccccaagctgcaagcc
atcaccgcctcctctgccaacctgcagcactctccccgcgtggtgatgcgccacacgcct
gcccggatgcatccccggggtgggggggaggatgaggcagctgctgaggaggacgaggag
gaggaggatgaagatgatgagaacacagaggaggggggggctgcccgtcttaatggcaga
gggggccgggtgcaggagggtgaggagagctggatgcagcgcgaggtgtggatgtctgtc
ttccgctacctcacccgcagggagctctgcgagtgcatgcgggtgtgcaagacctggtac
aagtggtgctgtgacaagagattgtggacaaagatagatttgagcaggtgcaagtccatc
accccccaggcactgagtggtatcatcaaaagacagcctatcagccttgacctcagctgg
accaacatctccaaaaagcagctcacgtggcttgtcaacagactgccaggcctgaaagac
ctcatcttagcaggctgttcctggtctgcagtctgtgctctcagtacctccagctgcccc
cttctcaggacccttgatcttcggtgggcagtaggaatcaaggaccctcagatccgggat
ttgctcacacctccaacagataaacccagtcaggacaatcgcagcaaactccgcaacatg
attgatttccggcttgctggcctggacatcaccgatgccacactgcggctgatcatccgc
cacatgcccctgctctcccgcctcgacctcagccactgcaaccaccttacagaccagtct
gccaacctcctcacagccgtgggctcctccacacgcaactccctcactgagctcaacatg
gcaggctgcaataagctgacagaccaggccttgctgtacctgcgccgcatctccaacgtc
accctcattgacctacggggttgcaagcagatcactcgcaaagcctgtgagcacttcatc
tcagatctgtccatcaacagcctctactgcctgtccgatgagaagctgatccaaaaaatc
agctag
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integrated database retrieval system
