Coturnix japonica (Japanese quail): 107314745
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Entry
107314745 CDS
T04297
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107314745 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107314745 (TDG)
Enzymes [BR:
cjo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
107314745 (TDG)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107314745 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
107314745
NCBI-ProteinID:
XP_015719794
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All DBs
Position
1:complement(50035468..50044432)
Genome browser
AA seq
418 aa
AA seq
DB search
MAAGGAPRSAMEAEELGRYYAYLQQAQAFYTFPFHQMMTALPTMEAMTEQPTLERIPEPN
LAQEPPKDVKKGGRKRKAKATEPKQPKKPAAKKEKVTKSKGKQEKITDTFKVKRKVNRFN
GVSEAELLTKTLPDILTFDLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSNEQ
LNHMDDHTLPHKYGIGFTNMVERTTPGSKDLSSKEFREGGRILMQKLQKYKPRIAAFNGK
CIYEIFSREVFGIRVKNLEFGLQPHKVPETETLCYVMPSSSARCAQFPRAQDKVHYYIKL
KDLRDQLKGIAPNTEVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYCDRAPY
ESEQCNFSSNGTAPSNPQYCEGSSFGEVPNGQWMTQSFADQIPEFGAGMTQEQEGSNV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggaggggcgccgcgctcggccatggaggccgaggaactgggcagatactac
gcttatctccagcaagctcaagctttttatacgtttccgttccaccagatgatgactgca
ctgcctaccatggaagccatgactgagcagccgactctagagagaattccagagccaaac
cttgctcaggaaccccctaaagatgttaaaaaaggtggaaggaagagaaaagccaaagca
actgagccaaagcaacctaaaaagcctgctgctaagaaggaaaaagtgaccaagtcaaaa
gggaaacaggaaaagatcacagatacttttaaagtgaaaagaaaagtgaaccgttttaat
ggtgtgtctgaagctgagcttctgacaaagactttacctgatattttgaccttcgatctg
gacatcgtaataattggcataaaccctggcttgatggcagcttacaaaggacatcattac
cctggacctggaaaccatttttggaagtgtctcttcatgtctggtctgagtaatgaacag
ctgaaccatatggatgaccacaccttaccgcataaatatgggattggatttacaaatatg
gtagaaaggacaacacctggaagcaaagacctctccagtaaagagtttcgagaaggaggg
cgaatcctgatgcagaaattacagaagtataaacctcgtatagcagctttcaatggaaaa
tgtatctatgaaatttttagtagggaagtttttggaataagagttaagaacttggaattt
ggattgcagccacacaaggtaccagagacagaaactctgtgctacgttatgccatcatcc
agtgcaagatgtgctcagtttcctcgtgcacaagataaagttcattattacataaagcta
aaagacttaagggatcagctgaaaggcattgcaccaaacacagaggtgcaggaggtgcag
tacacctttgacttacagcttgcacaagaggatgctaaaaagatggctgtcaaggaagaa
aaatatgatccaggttatgaagcagcatatggaggagcttactgtgatcgtgcgccatat
gaaagcgaacagtgcaatttctcttcaaatggaactgcaccaagcaatccacagtactgc
gagggctcatcttttggtgaagttcctaatggacagtggatgacgcagtcctttgcagac
cagattccagagttcggtgctggtatgacgcaagaacaagagggaagtaatgtgtga
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