Coturnix japonica (Japanese quail): 107315348
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Entry
107315348 CDS
T04297
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04620
Toll-like receptor signaling pathway
cjo04621
NOD-like receptor signaling pathway
cjo04622
RIG-I-like receptor signaling pathway
cjo05164
Influenza A
cjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107315348 (TRAF3)
04621 NOD-like receptor signaling pathway
107315348 (TRAF3)
04622 RIG-I-like receptor signaling pathway
107315348 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
107315348 (TRAF3)
05168 Herpes simplex virus 1 infection
107315348 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
Cast
MPS2
ATG16
Sina_ZnF
zf-C3HC4
FliJ
CEP104_ZnF
Spc29
KxDL
GAS
Crescentin
DUF1664
SPATA24
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
107315348
NCBI-ProteinID:
XP_015721124
UniProt:
A0A8C2SR25
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All DBs
Position
5:45318320..45382916
Genome browser
AA seq
567 aa
AA seq
DB search
MDTSKKTEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHFILC
NPKQTECGHRFCETCMNALLSTPSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLKTDCQFEELACPRADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSMLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKRPDGEMNIASGCPRFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaagaagacagaaccccctttatctgtagaaatggtacaacaaagggcc
aatcctgatcgcagtccttcagcatcaatttatgttccagagcaaggtggctacaaagag
aaatttgtaaatgctgtggaggataagtataaatgtgaaaaatgtcacttcatcttatgc
aatcctaaacagactgaatgtggacacagattctgtgagacttgcatgaatgccctgctg
agcactccgagtccaaaatgtacagcatgtcaagaaagcatagtaaaagacaaggtattt
aaggataattgctgcagaagagaactacttgctcttcagatttactgcagaaatgaaaac
aagggctgcaaagagcaactttctttgggtcaattactgatgcatttgaaaactgattgt
cagtttgaagaacttgcatgtcctcgtgctgattgcaaagaaaaaatactgagaaaagat
ttgccagaccatgtagagaagacctgtaaataccgggaaacaacttgtaaatactgtaaa
agccaagtcccaatgattatgttgcagaaacatgaagatacagactgcccatgtgtcatg
gtttcatgtcctcataaatgcagtgttaaaacactcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaatcaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctacggaataatgaatctaaaatacttcatttacagcga
gtgatagacagtcaagcagagaaactgaaagaactggacaaagaaatccgtcccttccga
cagaactgggaggaggctgacagcatgaagagcagtgtagaatccctccagaatagagtg
actgagctggaaagtgttgacaaaactgcagggcaaggagctcgaaatacaagcatgcta
gagacacagctcagcaggcacgatcagatgctgagcgttcatgatattcggctggctgac
atggacctccgattccaagttttagaaactgctagttacaatggagtgttaatttggaaa
attcgagattataaacgtcggaagcaagaggcagtcatggggaagactctctccttgtac
agccaacccttttacaccggatactttggctacaagatgtgtgccagagtttaccttaat
ggagatggcatgggaaaggggacgcacttgtcgctgttctttgtcataatgcgtggagaa
tacgatgcattgcttccttggccatttaaacagaaagtgactctcatgctaatggatcag
ggtccgtctcggcgccacttgggagatgctttcaagccagatccaaacagcagcagtttc
aaaagacccgatggagaaatgaatattgcctctggttgtccacgctttgtggctcaaact
gttctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcggatctaccagacccctga
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