Coturnix japonica (Japanese quail): 107320284
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Entry
107320284 CDS
T04297
Symbol
PCDHGC3
Name
(RefSeq) protocadherin gamma-C3
KO
K16497
protocadherin gamma subfamily C
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjo04515
]
107320284 (PCDHGC3)
Cell adhesion molecules [BR:
cjo04515
]
Cadherins
Protocadherins
107320284 (PCDHGC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_tail
Cadherin_CELSR2_9th
TMEM154
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
107320284
NCBI-ProteinID:
XP_032303408
LinkDB
All DBs
Position
13:complement(14771135..14805777)
Genome browser
AA seq
1906 aa
AA seq
DB search
MSDHSCAVFLFLPVLTCALMRSVCPVTRSPSAPFPRQGRPVRFASPGARGGTALPPGGQL
PSVRGAEPRTAAVSPRGLRVPLLAAAAAASRPPGCSLSRRCSQRAAETQRQSRSPDRSVQ
SASELGEGDSRLESLREEEGERRTQLPMAGGQQRSRWRWAEGLLPALLLCCCCCRAAPER
LRYAIPEELSRGSLVGPLARDLGLSPAELPARQLRIVSGDEKRYFVLEEESGNLRVNERI
DREGICGDVTPCVFGLETVMENPFNIYHVSITIQDINDNAPRFDKEVVAIELIESTPPGT
RLPLGTGRDPDIGVNSLQSYQLTPNPLFSLVVKEDSDGRKHAELLLEKNLDREKQKSHNL
ILTAVDGGDPVRSGTTQIKIDVTDANDNAPVFTKEIYKVGVPENLPEGSLAFQVKATDGD
EGTNAEITYSFNDIASSARQLFSLDPKTGDVRITGPLDYEDVKYYKVTVEGKDGGGLSAH
AKVHIDIIDVNDNAPSLTLLPILNPIPEDSVPSTVVAVINVRDRDSGVNGEVTCNLDGDL
PFKLEASSESTYKLVIENSLDREEVSTYNITIIATDRGSPALSSRADLVLEVSDVNDNAP
AFSQAVYRVYARENNAAGAELARLWARDPDEGGNGRVSYSVAEGGAEAAAVSVRAETGEL
YAQRSFDYERCREFAVEVRARDGGTPARSATATVRVFVLDRNDNAPRVLWPAAGGADGGG
AGAGAGAGAGPFELVPRSAGPGYLVGTVTAVDADAGLNSRLSYQLLQAPEPALFRVGLHS
GEVRTTRAVSERDAAKQRLVAVVKDHGQPALSATATLHVVLAESVQDALPELSEKNAESE
VASDLNLILVVALALVSLLFVFTVILVVFFKCRRPRSPPIFLTSDKELYSSLGPKAPFNY
CSSTLPLPYAYEVCLASESGQKDFTFLKPGAAALSDLLTGEAGAGGQSEKDPPDPDSSVQ
RGQLRISRGKRRGAMKGVAARSRGVTPGQVLSLCLLLAASSGASAAIRYAIPEEARRGSA
VGNVAADLALDPARLSGRRPRVVSGGSKKYFAVDPASGALVVSSRLDREELCGALSPCTL
SFEIVLEKPLELYSGAVEIQDINDNDPVFPSGQARLEISESVVAGTRFPLESAQDPDVGI
NSLQTYQLSANPHFVLDVQTRVDGSKHAELVLEKELDREEQRELHLVLTALDGGSPPRSA
HMQIHIDVVDSNDNAPVFNQSTYKASVRENTPSGTLVTKVSAYDLDDGPNGDIVYSFSSH
TPAKVRELFALDSDTGELRVKGQLDYEETKLYEIYLQAKDKGAVPGVANCKVLVEVVDVN
DNAPEVTVTSVYSPVPEDAAPGTVVALLSVTDLDSRDNGLVNCFIPPGIPFTLSSSLKNY
YTLKTKAALDREEASEYNITVTARDSGSPPLSAVKHILVQVSDVNDNAPKSSQDSYDVYV
LENNVPGISILNVSATDPDLGRNGHLSYSLLQGDNTVGHLFSINRESGALHLLTSLDHED
RMEFSMMVQVQDGGSPPLATNLSVNVFVTDLNDNAPTVLYPLPNSTSSYTDVVAPGTPAG
HVVTKVVAVDADAGYNAWISYTLLQATDPTLFSVGLHSGEIITARQLREDEAPQHTLVIL
LKDHGEPALSASATVSISVAERVKEALTDLTDVTPPHDPKRHMTFYLILAVILVSAAFFI
TIVSVGIFKCYKWRQSKELFNSSRSTLYRTPGPFHHVDAVRGGFTPPNFYHQVYLTTDSR
QSDLLCKKPITSSPLGSRQNTMRSGEPGLYHQMVGTASRLPAPTEQAQPNPDWRFSQTQR
PGTSGSQNGEEGGAWPNNQFDTEMLQAMILASANEATDVNATLGGGTGTMGLSARYGPQF
TLQHVPDYRQNVYIPGSTATLSNAAGKRDAKPSGGNKKKSGKKEKK
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatcattcctgtgcagtgtttctgttcttacctgtgctcacctgtgctctgatg
cgcagcgtctgcccagtaacgcgttccccctccgctccgtttccacggcagggccgacct
gttcgcttcgcctctcccggtgcccggggaggaaccgcgctgccgcctggcgggcagctg
ccgtcggtgcggggagcggagcctcggacggctgcggtatcaccgcggggcctccgggtg
ccgctgttggccgccgccgccgccgcttcccgtccccccggctgctctctctcccggcgc
tgctcacaacgggcagcagagacgcagcggcagagtcggagcccggatcgcagcgttcag
tccgcatcagagctcggggagggcgattcccggctggaatcgctgcgggaggaggaagga
gagcggcgaacgcagctcccaatggcgggcgggcagcagcggagccgctggagatgggca
gaggggctgctgcccgctttgttgctgtgctgctgctgctgccgggcggcgccggagcgg
ctccgctacgcgatccccgaagagctgagcaggggttcgctggtggggccgctggcgcgg
gacctggggctgagcccggcagagctgccggcgcgtcagctgcggattgtctccggtgat
gaaaagcgatacttcgttctcgaggaagagagtggaaacctgcgcgtaaacgagaggata
gatcgggagggcatctgcggagacgtgacgccttgtgtcttcggtttggaaactgtcatg
gaaaaccctttcaatatatatcacgtgagcattactatccaggatatcaatgacaatgcg
ccgcgctttgacaaagaagttgttgctatagaattgatcgagtccactcctcccgggacg
aggctccccctgggcactggcagagatcccgatattggggtgaactcgttacagagctac
caacttacccccaatccgctcttctcccttgtagtgaaggaggactctgatgggaggaaa
catgcagagctgctgttggagaaaaacttagatcgtgaaaaacagaaaagccataatttg
atactaacggcagtggacggtggggatccagtccgatctggaaccacccagataaagatc
gatgtgactgatgcaaatgataacgcaccggtgttcaccaaagagatctacaaggttgga
gtgccagaaaaccttccagaaggctccttagcttttcaggtgaaagctactgatggagat
gagggtacaaacgcggaaatcacctattctttcaacgacattgcaagcagtgctcgccag
ctcttcagtctggaccccaagacaggtgacgtgaggattaccggtcccctggattacgaa
gatgtgaaatactataaagtaactgttgaaggcaaggacggaggtgggctgagtgcgcac
gccaaagtgcacatagacattatagacgtgaacgacaacgctccaagccttaccctcctg
cctattttgaacccgatacccgaggattcagttccgagcacagtcgtggctgtgatcaac
gttcgtgacagggactccggagtaaatggggaagtgacctgtaatcttgacggcgacttg
cctttcaaactagaagcgtcatcagagagtacctacaaacttgtaattgaaaatagcctg
gacagagaggaagtctctacttacaacatcacgatcatcgccacggaccggggcagcccg
gcgctgtcgagccgcgcggatctggtgctggaggtgtcggacgtgaacgacaacgcgccg
gcgttctcgcaggccgtgtacagggtctacgcgcgggagaacaacgcggcgggcgcggag
ctggcgcggctgtgggcgcgggacccggacgaggggggcaacgggcgcgtgagctactcg
gtggcggagggcggcgcggaggcggccgccgtgtcggtgcgggcggagacgggcgagctg
tacgcgcagcgctcgttcgactacgagcggtgccgcgagttcgccgtggaggtgcgggcg
cgggacggagggacgccggcgcgcagcgccacggccacggtgcgcgtcttcgtgctggac
cgcaacgacaacgcgccgcgggtgctgtggccggcggcgggcggggcggacggcggcggc
gcgggggcgggggcgggagcgggggcggggccgttcgagttggtgccgcgctctgctggg
cctggctacctggtgggcacagtgacggcagtggatgcagacgcagggctgaactcccgc
ctgtcgtaccagctgctccaggcgccggagccggcgctgttccgcgtggggctgcacagc
ggcgaggtgcgcacgacgcgggccgtgtcggagcgggacgcggccaagcagcggctggtg
gccgtggtgaaggaccacgggcagccggcgctgtcggccacggccacgctgcacgtggtg
ctggccgagagcgtgcaggacgcgctgccggagctgagcgagaagaacgccgagtctgag
gtggcttctgatctaaacctcattctcgtggtagctctcgctttggtgtctttgctattc
gttttcacggtcattttagtcgtgttctttaaatgccgacggcccaggagcccccccatc
tttctaacttccgataaggaactctactccagcctgggccccaaagcgcccttcaactac
tgcagcagcacgctgcccctgccctatgcctacgaggtgtgcctggcctccgagtcgggc
cagaaggacttcacgtttctcaaaccaggggcagcagcgctctctgaccttttgacgggg
gaagccggtgcaggtggtcagtccgagaaggaccctcccgaccctgacagctcggtgcag
aggggccagctgaggatttctagggggaagaggcggggagcgatgaaaggcgtcgctgcg
aggagccgcggggtgacgccggggcaggtattgagcctctgcctcctgctcgccgcttcc
tccggggcttccgccgccattcgctatgccatccccgaggaggcgcggagaggatcggcc
gtgggcaacgtggcagccgacctggcgctggacccggctcgactgtcggggcggcgaccg
cgggtggtgtccggcggcagcaagaagtacttcgcggtggatccggcgagcggggcgctg
gtggtgagctcgcggctggaccgggaggagctgtgcggagcgctctccccctgcaccctc
agctttgagatcgtgctggagaaacctctggagctgtacagcggcgccgtggagatccag
gacatcaatgacaacgacccggtttttcccagcggtcaggcgaggctggaaatcagcgag
tcggtggtggccgggacgcgcttcccgctagagagcgcgcaagatcccgatgtgggaatt
aactctttgcagacctaccagctcagcgccaacccgcacttcgtgctggacgtacagacg
agggtggacggcagcaagcatgcggaactggtgctagagaaggaactggacagggaggaa
caacgagagctgcacttggtcttgacggcgctggatggaggcagcccgccacggtcggcc
cacatgcagatccacattgacgtggtggactccaatgataatgctccagtcttcaaccag
tccacctataaggcaagtgtgagggagaacacgcccagcggcaccctggtcaccaaggtc
agtgcctatgacctggatgatgggcccaatggagacatcgtctactccttcagcagccac
acgccagccaaggtacgagagctctttgctctggactcagacacaggggagctgagggtc
aaaggccagctggactatgaggaaacgaagctgtatgagatttacttacaggctaaagat
aaaggtgccgttcctggtgttgccaactgcaaagtgctggttgaagtcgtggatgtgaat
gataatgctccagaggtgacggtgacttcggtgtacagccctgtgcctgaggatgcagcc
ccggggactgttgtagctctgctgagtgtaacagacttggactctcgagacaacggtctg
gtgaactgttttattccccctgggatcccattcacgctcagttcctccctcaaaaattac
tacacattgaaaactaaagcagctctggaccgggaagaggcatcagagtacaacatcacc
gtcacagccagggactcgggttcgccgcccttgtctgcagtaaagcacatcctggtgcag
gtgtcagacgtcaacgacaatgcacccaaatcttcccaggactcctatgatgtgtacgtg
ctggagaacaacgtgccaggcatctctattcttaatgtgagcgccacagacccagacctg
gggcgcaacggccatctctcctattccctcctgcagggtgacaacaccgtgggtcacctc
ttctccatcaaccgggagagtggtgccctccatctgctgacctccctggaccatgaggac
cggatggagttcagcatgatggtgcaggttcaggacggtggctctccgcctcttgccacc
aacctgtcggtcaatgtgtttgtcactgacctcaatgacaatgcccccactgtgctgtac
cccctccccaactccacatcctcctataccgacgtggtggcaccgggcactcctgcgggt
cacgttgtcaccaaggtggtggcggtggacgcggatgcgggatacaatgcctggatctcc
tacaccctgctgcaggccactgaccccactctcttctcagtcgggctgcacagtggggag
atcatcacagcccgtcagctccgggaggacgaggctcctcagcacaccttggtcatcctg
ctgaaggaccacggggagcccgcgctgtcagccagtgccaccgtctccatctctgtagcc
gagagggtcaaggaggcactcaccgacctcactgatgtgacacccccacatgaccccaag
aggcatatgactttctatctcatcttggctgtcattttggtctcggccgctttcttcatc
accatagtgtcggtgggcatcttcaagtgctacaagtggaggcagtcaaaggagctgttc
aacagctccaggagcaccctgtacaggacaccagggcccttccaccacgttgatgccgtg
cggggtggtttcacaccacccaacttctaccatcaggtctatctcaccacggactctcgg
cagagtgatctcctgtgtaaaaaacccatcacatccagccccctggggagccgccagaac
accatgaggagtggtgagccaggactgtaccaccaaatggtgggcaccgccagccggctc
cccgcacccactgagcaagctcaacctaacccggactggcgcttctctcagacccagaga
cctggaacaagtggctctcagaatggagaggaaggtggagcctggcccaacaaccagttc
gacacggagatgcttcaagccatgatcctggcctcggcaaatgaagccactgatgtcaac
gcaacactgggtgggggcacaggcaccatggggctgagcgcccgctatggcccccagttc
accctgcaacacgtccccgactaccggcagaacgtctacatcccgggcagcaccgccaca
ctgagcaacgccgccggcaaacgcgacgccaaaccctcaggcggcaacaagaagaaatct
ggcaagaaggaaaagaagtag
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