Coturnix japonica (Japanese quail): 107320579
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Entry
107320579 CDS
T04297
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107320579 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107320579 (SMCR8)
Membrane trafficking [BR:
cjo04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
107320579 (SMCR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
107320579
NCBI-ProteinID:
XP_015732027
LinkDB
All DBs
Position
14:5117356..5124709
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AA seq
935 aa
AA seq
DB search
MISAPDVVAFTREEELGDELYREPPLPEEYSVPLFPFSGHGSNPWAKVSSSKFSRDFILI
SEFSEQVGPQPLLTIPDDAKVPGSFDLNYFSLRIMSVDYQASFVGHPPGCAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADEHKIMQQFQELSAEFSKAS
ECLKTGNRKAFASELEKKLKDLDYTRTVLHNETEIQKKANDKGYYTTQAIEKANELASVE
KSIIEHQDLLKQIRSYPYRKLKESDFHPYEPECTLDQSGAGSGQDLAASDPAEPGEMHLY
SRLPSYTPKLIKAKPAKCFDKKLKTLEELCDIYFFTQTLDQLHHIERTFRGDVCYLLTNQ
ISRALLKQQNVTNFLFEDVSFLDEKAPENQYRGCQGLSQDAAEVKCSEESSAPKVVISMG
SYKSSVECVPIKMEQDMGDPQEPVMTESLTFEHQENLDYLDADLKGSISSGESIEVLGTE
KSASGLMKSESQASLPISPSPQVGRSKVGSRRTVSEDSIEVLSTCPSESLIPEDFKASYP
SAINEEPYVDDEEGGLRFNPRLNPGNADEQEDASNQENLAQIDSACCIGKESPSFLEPLP
DLGQKQCDEDGVVRIPPQPYRQAEQGLRSSFVGSPPCDNASGGLLPHELDSRYPTAGREV
SRTSLDECSDSTSYISSAASTCSDRTPSPAHPVCLANERHKKKAGQNALRFIRQYPFAHP
AIYSLLSGRTLVVLGEDEAIVKKLVTALSIFVPNCGAYAKPVKHWVTSPLHVVDFQKWKL
IGLQRTVSPAGVNVLHALSRYSRYVSILDADSKTLRCPLYKGTLVARLADHRTQIKRGST
YYMHVQSVLTQLCSKAFLYTFCHHLHLPINEREPEESVVNRRMNFLKHHLGLANEDVKIV
QYLAELLKLHYIQEPGQGVNPLLRFDYVPSFLYKI
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccccgacgtggtggccttcaccagggaggaggagctgggggacgagctg
taccgggagccgccgctgcccgaggagtactccgtgccgctcttccctttctccggccac
ggctccaacccttgggccaaggtgtccagctccaagttcagccgggatttcatcctcatc
tccgagttctcggagcaggtggggccgcagcccctgctgaccatccccgatgacgccaag
gtgccgggcagttttgatctcaattatttctcccttcggatcatgtcggtggattatcag
gcttcttttgtgggacaccctcccggctgtgcctaccccaagctgaacttcgtggaggat
tccaaagtggtgctgggggactccaaggaaggagcctttgcctatgtgcaccacctgacg
ctgtatgacctggaagccaggggctttgtgaggcctttctgcatggcctacatttctgct
gacgagcacaaaatcatgcagcagtttcaggaactctctgctgagttctccaaagcctcc
gaatgcctgaagacggggaacaggaaggcgttcgctagcgagcttgagaagaaactgaag
gatctcgactacaccaggactgtgctgcacaacgaaactgagatacagaagaaagccaat
gacaaagggtattatacaacccaagccatcgaaaaggccaatgagttggccagcgtggaa
aagtctattattgagcaccaagacctgctgaagcagattagatcgtacccctacaggaag
ctgaaggagtctgacttccacccctatgagcctgaatgtacgctggatcagtctggcgca
ggcagtgggcaggacctggctgcctcagaccctgctgagccaggagaaatgcacctctac
tcccgcctgccctcctacactcccaaactcatcaaagcaaagcctgccaaatgctttgac
aagaagctgaaaacgctggaggagctctgtgatatttattttttcacccagaccctcgat
cagttgcatcacattgagaggactttcagaggtgatgtgtgctacctcctgacaaaccag
atcagtagggcacttctgaagcaacaaaacgtaactaactttctatttgaagatgtatct
tttctggatgaaaaagcacctgaaaaccagtacagaggctgccagggactcagtcaagat
gctgctgaagtaaagtgttcagaagagtcctctgctcctaaggtggttatcagcatgggg
tcctacaagtctagtgtggagtgcgtcccaataaagatggagcaggacatgggtgaccct
caagaacctgtaatgacagaatccctaacttttgaacaccaggagaacctggactatctc
gatgcagacctcaaagggagtatcagtagtggtgaaagcattgaagttcttggaacagag
aaatctgcatctgggctgatgaaatcggagagccaggccagcctgcccatcagcccgagc
ccccaggtgggcaggagcaaggtaggcagccggaggactgtcagtgaggacagcattgaa
gtcctcagtacctgcccctctgagtctcttatcccggaagacttcaaagcgagctaccca
agtgcaattaatgaggaaccttacgtggatgatgaagagggaggccttcgtttcaacccc
agattaaacccaggcaatgctgacgagcaggaggatgcctcaaaccaggaaaacttggcg
cagattgattctgcttgctgtattgggaaggaaagtcccagcttccttgagcctctacct
gatctgggccagaagcagtgtgatgaggatggtgtggtcaggattccccctcagccttac
cgacaggctgagcaggggctgcgtagcagctttgtgggctccccaccctgtgataatgct
tcaggggggctccttccccacgagctcgattcacgctaccccacagcgggcagggaggtg
agcaggaccagcctggatgagtgctcagactccacaagctacatcagcagcgctgcctcc
acctgctccgaccgaacaccatctcctgctcaccccgtgtgcctcgcaaatgagaggcac
aaaaagaaggctgggcagaacgcgctgcggttcatcaggcagtacccctttgcccaccct
gcaatatactctctgctcagtggaaggaccctggtagtgctgggggaagatgaagcaata
gtcaagaagctggtgactgcgctctccatctttgtgccgaactgtggtgcttatgccaaa
cctgtgaaacactgggtcacttcccctctgcatgtggtggatttccagaaatggaagctg
attgggctccaaaggaccgtgtctccagcaggagtgaatgtgctgcacgccctgagccgc
tacagccgctacgtcagcatcctggatgcagacagtaagacgctccgctgcccactgtac
aaaggcaccttggtggccaggctggcagaccaccgcacacagatcaaacggggcagcacc
tactacatgcacgtccaaagcgtcctcacccagctgtgttcaaaagccttcctctacacc
ttctgccaccatttgcaccttcccatcaacgaaagggaaccggaggaatccgttgtgaac
cgcaggatgaactttctgaagcatcacctgggccttgctaatgaagatgttaaaattgta
cagtatttagctgagctgctgaagctgcattacattcaggaacccggccagggggtgaat
cctctgctcagatttgactacgttcccagctttttgtacaaaatctag
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