Coturnix japonica (Japanese quail): 107325017
Help
Entry
107325017 CDS
T04297
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107325017 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjo03041
]
107325017 (EFTUD2)
Spliceosome [BR:
cjo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107325017 (EFTUD2)
Complex C
U5 SnRNP specific factors
107325017 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
107325017
NCBI-ProteinID:
XP_015740955
UniProt:
A0A8C2U6E0
LinkDB
All DBs
Position
27:complement(763140..778949)
Genome browser
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDEDDELGRESKDLDELEDDDDDDDMGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKLGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacctgtatgatgagtttgggaactacatcgggccagagctggactctgat
gacgaggatgatgagttgggccgggagtccaaggacctggatgagctcgaggatgacgac
gatgatgatgatatgggggaccacgatgaggaccaccctgggatggaggtggtgctgcat
gaggacaagaagtattaccccactgctgaggaggtctatgggcctgaagtggagaccata
gtgcaggaggaggacacgcagcctctcactgagcctattattaaacctgtgaaaaccaag
aagttctctttgatggaacagacgttaccagtcactgtctatgagatggatttcctggca
gatctgatggacaactccgagctgattcggaatgtgactctgtgtgggcaccttcaccac
ggcaagacttgttttgtcgactgcctgatagagcagacgcacccagaaatcaggaagcgc
tacgaccaggatctctgctatactgatatattgttcacagagcaggagaggggagtgggg
atcaagagcacaccagtgaccattgtgcttccagacaccaaaggaaagtcttttctcttc
aacatcattgacaccccaggtcacgtcaatttttctgacgaggtgacagctggccttcgc
atttcggatggcgttgtgcttttcatcgacgcagctgagggggtgatgctgaacacagag
aggctgatcaagcacgcagtgcaggaacggctggcggtgactgtgtgcatcaacaaaata
gaccgcctgatcctggagctgaagctgccccctacagatgcttactacaaactccgacat
atcgtggatgaagttaatggtctgatcagcatgtattccaccgacgagaacctcgtcctg
tctccccttctggggaacgtgtgtttctccagctcacagtacagcatctgcttcacgctg
ggatcttttgcaaagatttatgcagacacatatggtgatatcaattatcaggagtttgca
aagcggctttggggtgacatctacttcaacccaaaaacgcggaagttcactaagaaggcc
ccaaccagcagctcccagcgcagctttgtggagttcattcttgagcccctgtacaagatc
ttggctcaggtggtgggggatgtggacacgaccctgcctcgcactctggatgaacttggc
atccacctgaccaaagaggaattgaaactgaacattcgaccgctcctacgacttgtctgc
aagaagttctttggggagttcacaggctttgtggacatgtgtgtgcagcatattccctcc
ccaaagttgggagccaagacaaaaatcgaacacacctacactggtggcgttgactccgat
cttggggaggccatgagtgaatgtgaccctgacggtcctctgatgtgtcacacaacaaaa
atgtacagcacagacgacggcgttcagttccatgcctttggccgagtgctcagcggtacc
atccatgctgggcagcctgtgaaggtcctgggagagaattacaccctggaggatgaggag
gattcccagatctgcactgttggacgcctctggatctcagttgcgaggtatcacattgag
gttaaccgtgttcctgctggcaactgggtgctgatagaaggagtggaccagcccattgtg
aagactgcaactgtcacggagccacgaggcaatgaggaggctcagatcttccgccctttg
aagttcaacactacgtctgtcatcaaaatagcagtagagccagtcaacccctctgagctc
cccaaaatgttggatggtctccgcaaagtcaacaagagctacccatcgcttaccacaaag
gtggaagagtctggagaacatgtgatcctggggacaggggagctctatctggattgcgtg
atgcatgatctgcggaagatgtattctgagattgatatcaaggtcgctgatccggtcgtg
acgttctgtgagacagtggtggaaacgtcctccctgaagtgctttgctgagactcccaat
aagaagaacaagatcacgatgattgctgaacctctggagaagggacttgcggaggacatt
gaaaatgaagtggtccaaataacgtggaacagaaagaagctgggtgaattcttccagacc
aaatacgactgggatttgctggctgcccgttccatctgggccttcgggccggatgccact
ggcccaaacatcctggtagatgatactctgccctcagaggtggacaaggcgctgctgggc
tccgtgaaggacagcattgtgcagggatttcagtgggggaccagggaagggcctctctgt
gatgaattgatccgcaatgtgaagtttaagatcctggacgcagtgattgctcaggagcct
ttgcaccgaggtggaggtcagatcatcccgacggcacggagggttgtgtactcagctttc
ctgatggccacccctcgtctgatggagccctactactttgtggaggtgcaggccccagct
gactgcgtgtccgccgtgtacactgtgctggcacggcgcagaggccacgtgacacaggac
gctccgatcccaggctcccctctgtacaccatcaaagccttcatccccgccatcgattcc
ttcggcttcgagacagacctgaggacccacacacagggacaggcgttctcactgtctgtc
ttccaccactggcagattgtgcctggtgaccctttggacaaaagcatcgtcatccgcccc
ctggagcctcagccggccccacatctggccagggagttcatgattaagacccgacgcagg
aagggcctgagcgaggacgtgagcatcagcaagttcttcgatgaccccatgttgctggag
ctggccaagcaagacgtcgttctcaactaccccatgtga
DBGET
integrated database retrieval system
