Coturnix japonica (Japanese quail): 107325051
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Entry
107325051 CDS
T04297
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjo04040
]
107325051 (SCN4A)
Ion channels [BR:
cjo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
107325051 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
107325051
NCBI-ProteinID:
XP_015741030
LinkDB
All DBs
Position
27:complement(1168886..1199985)
Genome browser
AA seq
1833 aa
AA seq
DB search
MAGLPYIPGPENLRPFTPASLAAIEQRIAEAEALKLKKQQVEMPEEEELKPSSDLEAGKN
LPLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYLLGPFHPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTMSNPPAWSKNVEYAFTGIYTFESLIKILSRGFCI
DDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPLNDTLMGDFGLDNATLAN
TTLYGNFTDGNFTSNSTFDFEAYINDEANFYFLEGALDALLCGNSSDAGKCPEGYMCVKA
GRNPNYGYTSFDTFSWAFLSLFRLMTQDFWENLFQLTLRAAGKTYMIFFVLVIFLGSFYL
INLILAVVAMAYAEQNDATMLEAQQKEEEFQQLMEQLKKQQEEQEKQLQDRQSSSSSLHS
SAAGKKSDSDLNSDQDKAKDCNGQVVPKVVLQRSATVIEFNPANEPEKSDSNHLTVGNPD
GPGLEKRVGSAISVISNTMEELEEAHQKCPSWWYKFAHTFLVWDCCYPWLKLKEFVKLVV
MDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEMVLKLIALDPY
EYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN
SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYMECVCKISLDCTLPRWHMHDFFHSFLIVF
RILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAASDD
DGEMNNLQIAIGRITRGIDFLKSSVLMLLRRLWKGKKVAPEEEQEPSKGDNSVLNHVDSS
PDPKPDYMDGVAGKEYLLMDELDHMNFINNPNLTVQVPIASEESDLYEETSTQSDTEDAK
NPLSSDNASSLCSTVDYKPPQPEEEEVAEEAEESNEPEECFTEGCVKRFPCLHVDITSDR
GKIWWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKVIRTILEYADKVFS
YIFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLVSLTANWLGYSELGAIKSLRTLRA
LRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYRCVNTT
TGELFDISVVNNKSDCMALLYTNEVRWVNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAA
VDSREIEEQPVYEINLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMT
EEQKKYYNAMKKLGSKKPQKPIPRPSNKFQGMVFDFVTKQVFDISIMILICLNMVTMMVE
TDDQSETKTDILYKINLVFIVIFTGECVLKMFALRYYYFTIGWNIFDFVVVILSIAGIVL
SDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVM
FIYSIFGMSNFAYVKKEAGIDDIFNFETFGNSIICLFQITTSAGWDGLLSPILNSGPPDC
DPNLENPGSSIKGNCGNPSIGIFFFCSYIIISFLIVVNMYIAVILENFNVATEESSEPLC
EDDFEMFYEIWEKFDPDATQFIAYSTLSDFVDTLQEPLRIPKPNKIKLITMDLPMVAGDK
IHCLDILFALTKEVLGDSGEMDALKDTMEEKFMAANPSKVSYEPITTTLKRKQEEVCATK
IQRAFRRYLLRRSVKQASYMYRHSKDEEALMGDAPEKEGLIATKMHETYGNSGTDAEMGA
AIDLAPVPSSETQSAPVESKPPSGQRVVKESLV
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atggctggcctgccgtacatcccgggccctgaaaacctgcgccctttcacccccgcctcg
ttggctgccatcgagcagcgcatcgccgaggcagaggcacttaagttaaagaagcagcag
gtggagatgcccgaggaagaggagctcaagcccagcagtgacctggaagccggcaagaac
ctgccccttatctatggagatccccccttagagctcatcgggacccccctggaggatctg
gaccctttctacaaggataagaagacgttcatagtcctcaacaaagggaagtccatcttc
cgcttctcagctactcctgcgctctacctgctggggcccttccaccccatccggagagga
gccatcaaagtgctcatccattcattattcagcatgttcatcatgatcacgattttaacc
aactgtgtgtttatgacgatgagcaaccccccggcgtggtccaagaacgtggaatacgcc
ttcactggaatatacaccttcgagtccctcattaagatactgtcgagaggtttctgcatc
gatgactttacattcctgcgtgacccgtggaactggctggacttcatggtcatctccatg
gcctacatcactgagtttgtggacctggggaacatctctgccctcagaaccttccgtgtc
ctccgtgccttgaaaaccatcacagtgataccaggcctgaagactattgtgggagcccta
attcagtctgtgaagaagctctcagatgttatgatcctgactgtgttttgtctgagtgta
tttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgcctgcagtgg
ccgcccctcaatgacaccctgatgggggactttggtttggacaacgccacgttggccaac
acaacgctctacggcaacttcaccgacggcaacttcaccagcaacagcaccttcgatttc
gaagcctacatcaacgatgaagcaaatttctacttcctggagggagcgcttgatgccctg
ctctgtgggaacagcagtgatgctgggaagtgcccagaagggtatatgtgtgtgaaagct
ggtagaaaccccaactatggctacacaagttttgacacattcagctgggctttcctctcc
ttattccgcctgatgacacaggacttctgggagaacctcttccagctgacactacgtgca
gctgggaaaacatacatgatatttttcgttctggtgatttttctgggttccttctacctc
atcaacctcatcctggccgtggtggccatggcctacgcagagcaaaacgatgccacgatg
ctggaggcgcagcagaaggaggaggagttccagcagctcatggagcagctgaagaagcag
caggaggagcaggagaagcagttgcaggacaggcaatccagcagcagttccctgcacagc
agcgcggccgggaagaagagcgactcggatctgaacagcgaccaggacaaggcaaaggac
tgcaatgggcaggtggtccccaaggttgtgctgcaacgctctgccacggtgatcgaattc
aacccagccaatgagccggagaaatcagactccaaccatctcactgtgggcaacccagat
gggccagggcttgagaagagggtgggaagcgccatcagtgtcatctccaacaccatggaa
gagctggaggaagctcaccagaagtgcccgtcctggtggtacaaatttgcccacacgttc
ctggtgtgggactgctgctacccatggctgaagctgaaggagtttgtcaagctggtggtg
atggatccctttgtggacctgggcatcactatctgcatcgtgctcaacacgctgttcatg
gccatggagcactaccccatgacggaggagtttgagaacgtgctgactgtggggaacctg
gtcttcacggggatcttcacagcagagatggtgctgaagctcatcgctctggatccctat
gagtatttccagcagggctggaacatttttgacagcataattgtcacattgagcctggtg
gagctggggttggccaacgtgcaggggctctctgtgctgcgctccttccgcttgctgagg
gtcttcaaactggcaaaatcctggccaactctaaatatgctgattaagattattggcaac
tcagtgggagctttgggcaatttgaccctggtgctggccatcattgtgttcatttttgct
gtggttgggatgcagctgtttgggaaaagctacatggagtgtgtctgcaagatctccctg
gactgcacgctgccccgctggcacatgcatgacttcttccactccttcctcattgtcttc
cgcatcctgtgcggagagtggatcgagaccatgtgggactgcatggaggtggctggccag
accatgtgccttatcgtcttcatgatggtcatggtcatcgggaacctggtggtgctcaac
ctgttcctggccttgctgctgagctcctttagtgccgacaaccttgcggcctcagatgat
gatggtgagatgaacaacctgcagatcgccatcggccggatcaccaggggcatcgacttc
ctcaagtcttctgtcctcatgctgctgcggaggctgtggaagggcaaaaaggtggccccg
gaggaagagcaggagcccagcaaaggggacaactctgtgctgaaccacgtggatagcagc
ccggatcccaagccggattacatggacggagtcgcagggaaggaatatttgttgatggat
gagttggaccacatgaatttcatcaacaatcccaacctgaccgtgcaggtccccatcgcc
tcggaggagtccgacctctatgaggagacgagcactcagtctgacactgaggatgccaag
aaccccctttccagcgacaacgcctcgtccctgtgcagcaccgtggactacaaaccacct
cagcccgaggaagaggaggtggctgaagaggctgaagagagcaatgagccggaggagtgc
ttcactgaaggctgcgtcaagaggtttccctgtctccatgtggacatcaccagcgacaga
gggaagatctggtggaacctccggaaaacctgctacagcattgttgaacacaactggttt
gagaccttcattgtcttcatgattctcctcagcagtggagctctggcttttgaggacatc
tacatagagcagaggaaggtgatccgcaccatcctggagtacgctgataaggtcttctcc
tacatctttgtcattgagatgctgctcaagtgggtggcctatggcttcaaggtgtacttc
accaatgcgtggtgctggctggacttcctcattgtcgatgtctcccttgtcagcctaaca
gccaactggttgggatactccgagctgggagccatcaaatctctgcggacactgagagca
ctgagacccctgcgtgccctgtccagatttgaaggcatgagggtggtggtaaacgcattg
ctgggtgccatcccctccattatgaacgtcctgctggtctgcctcatcttctggctgata
ttcagtatcatgggggtgaacctcttcgcggggaagtactaccgatgcgtcaacaccacc
acgggggaactctttgacatcagcgtggtgaacaacaagagcgactgcatggctctgctc
tacaccaacgaggtcagatgggtcaacgtcaaagtcaacttcgacaacgtgggcttggga
tacctgtccttgctgcaggtggccacatttaaaggttggatggatattatgtatgcagca
gtggattcacgagagattgaagagcagccagtgtatgagatcaacctctacatgtacatc
tacttcgtcatcttcatcatctttggatccttcttcaccttgaacctcttcattggtgtc
atcatcgacaatttcaaccagcagaagaaaaagtttggaggcaaagacatcttcatgaca
gaagagcagaagaaatactataatgccatgaagaagctcggctccaagaaaccccagaag
cccatccccaggccctcgaacaagtttcaaggcatggtctttgattttgtcaccaagcaa
gtatttgacatcagcatcatgatacttatctgtcttaacatggtcaccatgatggtagaa
acagacgatcaaagcgagaccaaaactgacatcctctacaaaatcaacctggtcttcatc
gtcatcttcactggagagtgtgtgctaaagatgttcgccttgcgctactactacttcacc
attggctggaacatctttgactttgtggtggtcatcctctccatcgcaggtattgtcctc
tctgacatcatagagaagtacttcgtgtcacccacgctcttcagggtcatcaggctggca
aggatcggccgcgtcctccggctgatccggggagctaaaggcatccggacgctgctcttc
gctctcatgatgtccctccctgccctgttcaacatcggcctcctgctcttcctcgtcatg
ttcatctactccatcttcgggatgtccaacttcgcctacgtaaagaaggaggcggggatt
gatgacatcttcaactttgagacttttgggaacagcatcatctgcctcttccagatcacc
acgtcggccggatgggatgggctgctcagcccgatcctaaacagcggcccccccgactgc
gaccccaacctggagaaccctggcagctcaataaagggcaactgcggcaatccatccata
ggcatcttcttcttctgcagctatatcattatatccttcctcatcgtagtaaacatgtac
atagctgttattttggagaacttcaatgttgctactgaggaaagcagcgagccgctctgc
gaagacgattttgagatgttttatgaaatctgggagaagtttgaccctgatgccacccag
ttcattgcgtacagcaccttgtctgactttgtggacaccttacaggagccactcaggatc
cccaagccaaacaagatcaagctgatcaccatggatttaccgatggtcgctggggacaaa
atccactgcctggatatcctctttgccctgacgaaggaagtgctgggggactcaggagag
atggacgccttgaaggacactatggaggagaagttcatggcagccaatccttctaaagtc
tcctatgaaccaatcacaaccactctgaagaggaaacaggaggaggtgtgtgcaacgaaa
atccagcgggcgttccggaggtacctgctgaggcgctcggtcaagcaggcgtcctacatg
taccgacacagcaaggatgaggaggcactgatgggggatgcccctgagaaggaaggtctg
attgcaaccaaaatgcacgagacgtatgggaacagtgggaccgatgcggagatgggcgct
gctattgatctcgcacccgtcccgagctcagagactcaaagtgctcccgtagaatcaaag
ccaccgagtgggcaacgtgttgtgaaggagtcactggtataa
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integrated database retrieval system
