Coturnix japonica (Japanese quail): 107325322
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Entry
107325322 CDS
T04297
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03440
Homologous recombination
cjo03460
Fanconi anemia pathway
cjo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107325322 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
107325322 (BRCA1)
03460 Fanconi anemia pathway
107325322 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cjo01009
]
107325322 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjo04121
]
107325322 (BRCA1)
03036 Chromosome and associated proteins [BR:
cjo03036
]
107325322 (BRCA1)
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107325322 (BRCA1)
Enzymes [BR:
cjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107325322 (BRCA1)
Protein phosphatases and associated proteins [BR:
cjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107325322 (BRCA1)
Ubiquitin system [BR:
cjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107325322 (BRCA1)
Multi subunit type E3
BRCC complex
107325322 (BRCA1)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
107325322 (BRCA1)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
107325322 (BRCA1)
BRCA1-A complex
107325322 (BRCA1)
BRCA1-B complex
107325322 (BRCA1)
BRCA1-C complex
107325322 (BRCA1)
BRCA complex
107325322 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
107325322 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
BRCT_2
zf-RING_2
zf-C3HC4_3
BRCT_3
zf-RING_6
zf-Nse
zf-RING_5
RING_XB3-XBAT31
zf-RING_10
RTT107_BRCT_5
zf-MIZ
zf-ANAPC11
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
107325322
NCBI-ProteinID:
XP_015741532
UniProt:
A0A8C2T0W8
LinkDB
All DBs
Position
27:complement(4736210..4752465)
Genome browser
AA seq
1746 aa
AA seq
DB search
MDFSAIAFGDVQNVLSAMQKNLECPVCLDIIKEPVSTKCAHIFCRFCMFKLLSKKKKGVI
QCPLCKTEVTKRSLKENSRFKQLIEALLEAISAFELDTGVKFLSSCYFPKTSTDAATAEL
LGNNSSVIQSKGFRNRKKSAKENGQESYTLWEANVDPQLTDNRVEGCSIRSKKQKHRSEK
GVLIELGTDSSEELSVLARGTGLEDKEELEKPKSAEKRGNSCNTQPLKLAAKEIILPDVI
GETDFLKEALSKKRILNIGEHVKSNQVNTIEGQSSPLNVFDADLLTEQCDGMGNVSPLKN
NDTPFSKNEEMDAEETQCSSKNQELDLKDSSENSLHKIKEKDICMPSVEDVEMYEPMNDS
LPEKEPPVEKLLQPKIHHCPTLHEVSRKRLKQSIQKVNDWFSKSNEILSSSSSQNDPAEV
TDASGEGDISLSDKDSCISERTNPIVDSVEFAVVERNKRWPKQTTYSINDKIFGKTYERG
RKSNPSTILSDILPATKKEDVAVEEECLNSSRKDGLKRKRKPARVLQPEDFVKKKDLEEV
DRCPQGINSSLGDAKKKKCDENSAVKENPLLEKRKGCTQAEFEEGGLKWKNATENVSGKQ
SDGELVLNNSDKKSAKNTCSAAKGCRRSTRIKSAIHLVDRNPGSFDPAESLIDSYPSSEE
PSKVDGEQRQVRRSRRLQLLSEEITKETGKIRLKEARNSDSVPEGSVFGAERNVLVHDSQ
CRDPGKKQGILSYISLADQNGADLKANGIQISPNNSADMAKNRSLFSPIFTCQHSDFNFP
SPKAGSQEGEMLGRLSLQQSPSKTVLHTASILTEEKRSGSCTTFPHDKGCCSQNVPDDFR
IGKSPMAENASELTTEAEDSELDTQYLRNIFRSSKRQSFSLYPTPVKACTTNVVASEQNT
PCLDRVEKRHSEYLKTENLQEEKTAEDPSSVCEKFKTCESSYVSPVSCFVSNAECVHPMK
NQEDVSKVTNHGNPTPPVRMHGARNEGRNRPQKGEQGSEETLSADIRVESKLRLNPIRSS
RSQSDQSNTEEHAFQRTDMNTVSETHFSSESNKVEKAEVDGKELMQHSQLSPMVFPTACQ
QNPAEFNCEVTEKESSKRGRSLVKSNEERVIETVSTGLSEYLGREALEESLKGRSEFTDL
SETPDGLLCSDNDTEESTSFHVTNRKDTSAVFVKRSVALVKEANDSVVSCKPSSEGIRKS
RKRVQKLQSSDEESSEDEDLPCFQELMFGKSVSTPLQIKKQVTSVVQSSANLSMLSGSEC
HNENNEQKTLDAALNNECVSPSQESECSVNLFSSQSNMSEELVDGAQELKKTLIQVSNVN
KSKEGLQSCSGGLKRRKNSSSDEYPEDPNVGANLGEASGYNGETSHLEDAHEHFSQGEIL
STQQKNAMQNNLKKLQQEMAVLEAVLKQHGSQDTEELPLYRELPHSSSGGTLEMEQMRQE
TENVFEHDPETKLSKKSVLPDLCVNVTRNPNSSSSSLKHPCPQTAKATNSSTVSQSDNKS
NVQICKSKRSICFPTSVLYNSAGKENAASSGMTHRTEMSIVASGLNQSEHLMVQKFARKT
QSAFSNHITDGTTHVVMKTDEELVCERTLKYFLGIAGRKWVVSYQWIIQSLKEGRILDEE
NFEVKGDVINGRNHQGPKRARQSLAEKIFKDFEICCYGPFTGMSTGHLEWMLELCGASVV
KQLHLFTHKVNSTAVVVVQPDAWMEGTSYEAIQQKNNVIVVTREWVLDSVACFKCQELDA
YLLSQD
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atggacttttcagcgattgcctttggagatgtgcaaaatgtgctttcagccatgcagaag
aacttggagtgtccagtctgtttggatataataaaagagccagtttcaacaaaatgtgct
cacatattctgcaggttctgtatgtttaaactcctcagcaaaaagaaaaaaggtgtaatc
cagtgtcctctgtgtaagactgaagttaccaagagaagtctcaaagaaaattcaagattt
aagcaactaattgaagcactgttggaagctatcagtgcatttgagcttgacactggagta
aaatttttaagcagctgttattttcctaaaacatccacagatgctgctactgctgagctc
ttgggtaataacagttctgtcatccagagtaagggtttcagaaacaggaagaaaagtgct
aaagaaaatggacaagagagctataccttgtgggaagctaatgtggatccacagcttaca
gataacagggttgaagggtgttccataagaagcaaaaaacagaaacatcgcagtgaaaag
ggtgtactgatagagcttggtactgattcatctgaagagctttctgtactggcacgtggt
actgggttagaagacaaggaagagctagaaaaacctaagagtgctgagaagcgtggaaat
tcttgcaatacacagccactcaagctggctgctaaagaaataatcttaccagatgtcata
ggtgaaactgatttcttgaaggaagctttgagcaagaaacgcattttaaacatcggtgaa
catgtcaaatctaaccaagtaaacacaattgagggccagagttctcctttaaatgttttt
gatgcagacctactcacagaacagtgtgatggaatgggtaatgtcagtcctttaaagaat
aatgacacacctttctctaagaatgaagagatggatgcagaggaaactcagtgcagtagt
aaaaaccaagagcttgacttaaaagatagctcagaaaatagtctgcataagataaaagaa
aaggatatttgtatgccaagtgtggaagatgtagaaatgtacgaacccatgaatgattct
ttacctgagaaagaacctcctgtggagaaactactccagccaaagatacatcactgtcct
acccttcatgaggtctctaggaagagactgaagcaaagcattcagaaagtcaatgattgg
ttttcaaaaagcaatgaaattctgtcttccagttcatcccagaatgatcctgctgaagta
actgatgcttcaggcgaaggagatatttctctatcagataaagattcatgtatttcagag
aggaccaaccctatagtagattctgtggaatttgcagtggttgaaagaaacaagagatgg
ccaaaacaaacaacatatagcatcaatgacaaaatatttgggaaaacatatgagagaggg
aggaagtctaatccctctactatcttgagtgacattttgcctgctacaaaaaaagaagat
gtggctgtagaagaggagtgcttgaatagttccagaaaagatggactaaaacgaaaaagg
aagcctgcccgtgtccttcagcctgaagactttgtcaagaagaaagacctggaagaggta
gatagatgtcctcagggtattaactccagccttggagatgccaagaagaaaaaatgtgat
gaaaattctgcggtcaaggagaatcccctccttgaaaaaagaaagggttgtacgcaagca
gaatttgaggaaggaggattaaagtggaaaaatgctactgaaaacgtgtcaggcaagcag
tctgacggagaactggtactgaataactctgataagaagagtgctaagaatacatgctct
gcagcaaaaggatgcaggcgttcaactagaatcaagtctgctatacacttagttgataga
aacccaggttcctttgatccagctgagtcactgattgatagctatccaagcagtgaagaa
ccaagcaaagttgatggtgagcaaagacaagtcagacgcagcaggaggcttcagctactt
tctgaagagatcacgaaagaaacaggaaaaataagacttaaggaagcaagaaattctgac
agtgttccagaagggtctgtctttggagctgaaaggaatgtgttagttcacgattcccag
tgcagagacccagggaagaagcagggtatattgagttacatatcgcttgctgatcagaat
ggtgctgatctgaaggcaaatggaatacagattagtccaaataattcagctgatatggca
aaaaacagaagtctcttcagtcctatatttacttgtcaacattcagattttaatttccct
tcacccaaagcaggttctcaagaaggtgaaatgctaggtagactttccctccagcagtct
ccttcaaagactgttctgcacactgcttccatcctgactgaagagaagaggtctgggtca
tgtactacttttcctcatgacaaagggtgctgctcacagaatgttcctgatgacttcaga
attggaaagtcaccaatggctgaaaatgcttcagagttgaccacagaggctgaagacagt
gagttagacacacagtatctgcgaaatatatttaggagttcaaagcggcagtcttttagt
ctttatcctactcctgtgaaggcatgtactacaaatgttgttgcgtctgaacaaaatact
ccatgtcttgatcgggtagaaaaaaggcatagtgaatatttaaagacagaaaacttacaa
gaagagaaaactgctgaagatccgagtagtgtttgtgagaagtttaagacctgtgaatct
tcttatgttagtcctgtgtcgtgctttgtcagcaatgctgaatgtgtgcaccctatgaag
aatcaggaagatgtttcaaaggtcacaaatcatgggaatcctacaccaccagtaagaatg
catggtgctaggaatgaaggcagaaacagaccacaaaagggagagcagggaagtgaagag
acattgtcagctgacataagggtagaaagcaaactgagactgaatccaatcagaagcagt
agaagtcaaagtgatcagagtaatacagaagagcatgcattccaaagaacagacatgaac
acagtcagtgaaacacacttcagttcagaaagcaataaagtggaaaaggctgaagttgat
ggcaaagaactgatgcaacattctcagctcagtccaatggtttttcctacagcttgtcaa
caaaatccagctgaattcaactgcgaagtcactgaaaaagaaagtagcaaaagagggaga
agtctggtaaagagcaatgaagagcgagtaatcgaaactgtcagcacaggattgtcagag
tatttaggtagagaggcactagaagaatctcttaaaggccgcagtgaatttacagatctg
tctgaaacccctgatggcttactgtgctctgacaatgatactgaagaaagcaccagcttt
catgtaactaataggaaagacacatctgctgtgtttgtaaaaagaagtgtcgccctggtg
aaagaagcaaatgactcagttgttagttgtaagccaagttctgaaggtattcgaaagtct
cggaaaagagtccagaaactgcaatcttcagatgaagaatctagtgaggatgaagattta
ccatgttttcaggaattaatgtttggcaaatcagtaagcacgcctttgcagatcaaaaaa
caggttacatctgtggtccagtcttcagcaaatctgagcatgttgtccggcagtgaatgt
cataatgaaaataatgagcagaaaacacttgatgctgccctaaacaatgagtgtgtttcg
ccaagccaggagtcggaatgctctgtgaacttattttcatcacagtccaacatgtctgaa
gaattggttgatggagcacaggagctgaagaaaactttgatacaagtgagcaatgtaaat
aagagtaaagaaggtcttcagagttgcagtggagggctgaagagaagaaaaaatagctcc
agtgatgagtacccagaagatccaaacgtgggggcaaacctaggtgaagcatctgggtac
aacggtgaaacaagtcacctagaggatgcacatgaacacttttctcagggtgaaattctt
tctacacagcagaaaaatgctatgcagaataacctaaaaaagctacaacaagaaatggct
gtacttgaagcagtgctaaagcagcatggaagtcaggacactgaggaattgcccctatat
agggaactgccacattccagtagtggaggaacacttgaaatggagcagatgagacaagaa
acagaaaatgtgtttgagcatgaccctgagaccaagctaagtaagaaatctgttttacca
gatctgtgtgtaaatgtgaccaggaatccaaatagctcttcttcctctttaaagcatcct
tgccctcaaacagcaaaagcaacaaatagttccactgtatctcagagtgataacaaaagc
aatgttcaaatatgtaaatcaaagagaagtatatgttttcctacatctgtactgtacaat
tcagctgggaaagaaaatgctgcaagttcaggtatgactcacaggacagaaatgtcaatt
gtggcatccggtctgaaccagagtgaacatttgatggtccagaagtttgccagaaaaact
cagagcgctttctctaatcacataactgatggaacaacccatgtcgtaatgaaaacagat
gaggagctggtatgtgaacggacgttgaagtactttctgggtattgcaggaagaaaatgg
gtggttagttaccagtggataattcagtctttaaaagaaggcagaatactggatgaggag
aactttgaagttaaaggagatgtaatcaatggcagaaaccaccaaggtcctaagagagct
aggcaaagtctggctgaaaagatttttaaagactttgagatctgctgctatggacctttc
actggtatgtctacaggacatttggaatggatgttggagctttgtggtgcctctgtagtg
aaacaacttcatctgttcactcacaaagtaaattccactgctgttgttgttgtgcagcca
gatgcttggatggaaggcacaagttatgaagccatccagcagaagaataatgtcatcgtg
gtgactcgagagtgggtgttagacagtgttgcttgctttaagtgccaggaattggatgct
taccttttgtcccaagactga
DBGET
integrated database retrieval system
