Campylobacter jejuni subsp. jejuni 35925B2: UC78_0579
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Entry
UC78_0579 CDS
T03745
Symbol
nth_1
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cjq
Campylobacter jejuni subsp. jejuni 35925B2
Pathway
cjq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cjq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UC78_0579 (nth_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjq03400
]
UC78_0579 (nth_1)
Enzymes [BR:
cjq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
UC78_0579 (nth_1)
DNA repair and recombination proteins [BR:
cjq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UC78_0579 (nth_1)
Prokaryotic type
UC78_0579 (nth_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
DUF2400
DUF4460
Motif
Other DBs
NCBI-ProteinID:
AJP35079
LinkDB
All DBs
Position
complement(558377..559003)
Genome browser
AA seq
208 aa
AA seq
DB search
MKRNLEIKELFLKHFDKPVTELKFSNLYELLVCVMLSAQCTDKRVNLITPDLFKAYPDIK
SLANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFDGEIPLEEEKLKSLAGVGQKTA
HVVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPEATEEDLTGIFKDNLNYLHQAMVLFG
RYTCKAKKPLCKECFLNYLCKSKDKELK
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaatttagaaatcaaagaactttttttaaaacattttgacaagcctgtaaca
gagcttaaattttcaaatttatatgagcttttagtctgcgtaatgctttcagcccaatgc
actgataaaagagttaacctcatcactcctgatctttttaaagcttatcctgatatcaaa
tcccttgcaaatgcaaatttatcaagtcttaaaacctatatacaaacttgttcatttttt
aataataaagcacaaaatcttataaaaatggcaaaagcagtttgtgaaaattttgacgga
gaaattccccttgaagaagagaaattaaaatccttagcaggtgtaggacaaaaaaccgct
catgtagttttaatagaatggtgcggagcaaatttcatggctgtagatactcatgttttt
agagtttctcaccgcttaggacttagcaaagcaaaaactccagaagctacagaagaagat
ttaacaggcatatttaaagacaatcttaactatcttcatcaagccatggttctttttgga
cgctacacctgtaaagctaaaaaacctttatgtaaagaatgttttttaaattatctttgc
aaaagtaaagataaggaacttaaatga
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