Campylobacter jejuni subsp. jejuni 81116: C8J_0548
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Entry
C8J_0548 CDS
T00597
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cju
Campylobacter jejuni subsp. jejuni 81116
Pathway
cju03030
DNA replication
cju03410
Base excision repair
cju03420
Nucleotide excision repair
cju03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C8J_0548 (ligA)
03410 Base excision repair
C8J_0548 (ligA)
03420 Nucleotide excision repair
C8J_0548 (ligA)
03430 Mismatch repair
C8J_0548 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cju03032
]
C8J_0548 (ligA)
03400 DNA repair and recombination proteins [BR:
cju03400
]
C8J_0548 (ligA)
Enzymes [BR:
cju01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
C8J_0548 (ligA)
DNA replication proteins [BR:
cju03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C8J_0548 (ligA)
DNA repair and recombination proteins [BR:
cju03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
C8J_0548 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C8J_0548 (ligA)
MMR (mismatch excision repair)
DNA ligase
C8J_0548 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C8J_0548 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
PTCB-BRCT
Nlig-Ia
BRCT_2
HHH_5
RPA_interact_C
Motif
Other DBs
NCBI-ProteinID:
ABV52147
UniProt:
A8FL10
LinkDB
All DBs
Position
550055..551998
Genome browser
AA seq
647 aa
AA seq
DB search
MKKEEYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRAFEEQNKDEISKDSPTQKI
APTIQSEFKKIAHLKRMWSMEDVFDESEFRAWAKRAKCEKNFFIEPKFDGASLNLLYENG
KLVSGATRGDGEVGEDITLNVFEIENIPKNIAYKERIEIRGEVVILKDDFEKINEKRALL
NQSLFANPRNAASGSLRQLDTSITKERNLKFYPWGLGENTLNFTKHSEVMQFIRELGFLK
DDFVRLCVNLDEVLKAYDELLALREKKPMMMDGMVVRIDDLALCEELGYTVKFPKFMAAF
KFPALEKTTRLIGVNLQVGRSGVITPVAVLEPVNLDGVVVKSATLHNFDEIARLDVKIND
FVSVIRSGDVIPKITKVFKERREGLEMEISRPKLCPTCQSELLDEGTLIKCQNIDCEDRL
VNSIIHFVSKKCLNIDGLGENIVELLYKHKKITTLESIFHLKFNDFEGLEGFKEKKINNL
LNAIEQARECELFRFITALGIEHIGEVAAKKLSLSFGKEWHKQSFEAYANLEGFGEQMAL
SLCEFTRVNRTRIDEFYKLLNLKIEKLEIKSDGVIFGKTFVITGTLSRSRDEFKALIEKL
GGKVSGSVSKKTDYVLFGEEAGSKLIKAKELEIKCIDESAFNELVKE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaagagtatttagaaaaagttgctttagcaaatttgtggatgagggcatat
tatgaaaaagatgaacccttggctagcgatgaagaatacgatgctttaatcagagaatta
agagcttttgaagaacaaaataaagatgaaatttcaaaagactctccaacgcaaaaaata
gctcctactatacaaagcgagtttaaaaaaatagctcatttaaagcgtatgtggtcgatg
gaagatgtgtttgatgagagtgagtttagggcttgggcaaaacgcgcaaaatgtgaaaaa
aacttttttatagagcctaaatttgatggagcgagtttaaatttgctttatgaaaatggt
aaattagtaagcggtgccactaggggcgatggcgaagtgggtgaggatataacgcttaat
gtttttgagatagaaaatatacctaaaaatatagcctataaagaaaggatagaaattcgt
ggagaagtggtgattttaaaagatgattttgagaaaatcaacgaaaaaagagccctttta
aatcaaagtttatttgccaatccacgcaatgctgcaagtgggagtttaaggcagcttgat
acaagcatcaccaaagaaaggaatttgaaattttatccttggggactaggggaaaatacc
ttaaattttactaaacacagtgaggtgatgcaatttatcagagagctcggttttttaaaa
gatgattttgtaagactttgtgttaatttagacgaggttttaaaagcttatgatgagctt
ttagctttaagagaaaaaaagcctatgatgatggatggtatggtggtaagaattgatgat
cttgcactttgtgaagaattaggctatacggtaaaatttccaaaatttatggcagctttt
aaatttcctgcacttgaaaaaaccacgcgtttaataggcgtaaatttacaagtgggaaga
agtggagtgatcactcctgtggcggttttagaacctgtaaatttagatggggttgtagta
aaatcagccacccttcataattttgatgaaattgcaagacttgatgttaaaatcaatgat
tttgtaagcgtgataagaagtggcgatgttatccctaaaatcactaaggtttttaaagag
cgtagagaaggtttagagatggaaatttcacgccctaagctttgtcctacttgccaaagt
gagcttttggatgaaggaactttaataaaatgtcaaaatatagattgtgaagatagactt
gtaaattctatcattcattttgtttctaaaaaatgtcttaatatcgacggactgggagaa
aatatagtagaacttttatacaagcacaaaaaaatcactacgcttgagagtatttttcat
ttaaaatttaatgattttgaaggtttggaaggctttaaagaaaagaaaattaacaatctt
ttaaatgctatagaacaagcaagagaatgtgagctttttcgttttatcacagctttaggg
atagagcatattggcgaggttgcggctaaaaaattaagtttaagttttggtaaagagtgg
cacaagcaaagctttgaagcttatgccaatttagaaggttttggagagcaaatggcttta
agtctttgcgaatttacgcgtgttaatcgtacaagaattgatgagttttacaagctttta
aatttgaaaatagaaaaacttgaaatcaaaagcgatggtgtgatttttggtaaaactttt
gtaattacaggtactctttcacgctcaagagatgagtttaaggctttgatagaaaagctt
gggggtaaggtaagtggctcagtttctaaaaagactgactatgtgctttttggagaagag
gcaggttctaagctgattaaggctaaagagcttgaaataaaatgtatagatgaaagtgct
tttaatgagcttgttaaagaatag
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