Campylobacter jejuni 32488: M635_07295
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Entry
M635_07295 CDS
T02759
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cjz
Campylobacter jejuni 32488
Pathway
cjz03030
DNA replication
cjz03410
Base excision repair
cjz03420
Nucleotide excision repair
cjz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cjz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M635_07295
03410 Base excision repair
M635_07295
03420 Nucleotide excision repair
M635_07295
03430 Mismatch repair
M635_07295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjz03032
]
M635_07295
03400 DNA repair and recombination proteins [BR:
cjz03400
]
M635_07295
Enzymes [BR:
cjz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
M635_07295
DNA replication proteins [BR:
cjz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M635_07295
DNA repair and recombination proteins [BR:
cjz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
M635_07295
NER (nucleotide excision repair)
GGR (global genome repair) factors
M635_07295
MMR (mismatch excision repair)
DNA ligase
M635_07295
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M635_07295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
PTCB-BRCT
Nlig-Ia
BRCT_2
RPA_interact_C
Motif
Other DBs
NCBI-ProteinID:
AGQ95275
LinkDB
All DBs
Position
1391280..1393223
Genome browser
AA seq
647 aa
AA seq
DB search
MKKEEYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRVFEEQNKDEISKDSPTQKI
APTIQSEFKKIAHLKHMWSMEDVFDESELRAWAKRAKCEKNFFIEPKFDGVSLNLLYENG
KLVSGATRGDGEVGEDITLNVFEIENIPKNIAYKERIEIRGEVVILKDDFEKINEKRALL
NQSLFANPRNAASGSLRQLDTSITKERNLKFYPWGVGENTLNFTKHSEVMQFIRELGFLK
DDFVRLCANLDEVLKAYDELLVLREKKPMMMDGMVVRVDDLALCEELGYTVKFPKFMAAF
KFPALEKTTRLIGVNLQVGRSGVITPVAVLEPVNLDGVVVKSATLHNFDEIARLDVKIND
FVSVIRSGDVIPKITKVFKERREGLEMEISRPKLCPTCQSGLLDEGTLIKCQNIDCEDRL
VNSIIHFVSKKCLNIDGLGENIVELLYKHKKITTLESIFHLKFNDFEGLEGFKEKKINNL
LNAIEQARECELFRFITALGIEHIGEVAAKKLSLSFGEEWYKQSFEAYANLEGFGEQMAL
SLCEFTRVNRTRIDEFYKLLNLKIEKLEIKSDGVIFGKTFVITGTLSRPRDEFKALIEKL
GGKVSGSVSKKTDYVLFGEEAGSKLSKAKELEVKCIDESAFNELVKE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaagagtatttagaaaaagttgctttagctaatttgtggatgagggcatat
tatgaaaaagatgaacccttggctagcgatgaagaatacgatgctttaatcagagaatta
agagtttttgaagaacaaaataaagatgaaatttcaaaagactctccaacgcaaaaaata
gctcctactatacaaagcgagtttaaaaaaatagctcatttaaagcatatgtggtcgatg
gaagatgtgtttgatgagagtgagcttagagcttgggcaaaacgcgcaaaatgtgaaaaa
aacttttttatagagcctaaatttgatggagtgagtttaaatttgctttatgaaaatggt
aaattagtaagcggcgccactaggggcgatggcgaagtgggtgaggatataacgcttaat
gtttttgagatagaaaatatacctaaaaatatagcctataaagaaaggatagaaattcgt
ggagaagtggtgattttaaaagatgattttgagaaaatcaacgaaaaaagagccctttta
aatcaaagtttatttgccaatccacgcaatgctgcaagtgggagtttaaggcagcttgat
acaagcatcactaaagaaagaaatttgaaattttatccttggggagtaggggaaaatacc
ttaaatttcaccaaacacagcgaggtgatgcaatttatcagagagcttggttttttaaag
gatgattttgtaagactttgcgctaatttagacgaagttttaaaagcttatgatgagctt
ttagttctaagagaaaaaaaacctatgatgatggatggaatggtggtaagagttgatgat
cttgcactttgtgaagaattaggctatacggtaaaatttccaaaatttatggcagctttt
aaatttcctgcgcttgaaaaaaccacgcgtttaataggggtaaatttacaagtaggaaga
agtggagtgatcactcctgtggcagttttagaacctgtaaatttagatggggttgtagta
aaatcagccacccttcataattttgatgaaattgcaagacttgatgttaaaatcaatgat
tttgtaagcgtgataagaagtggcgatgttatccctaaaatcactaaggtttttaaagag
cgtagagaaggtttagagatggaaatttcacgccctaagctttgtcctacttgccaaagt
gggcttttggatgaaggaactttaataaaatgtcaaaatatagattgtgaagatagactt
gtaaattctatcattcattttgtttctaaaaaatgtcttaatatcgacggactgggagaa
aatatagtagaacttttatacaagcacaaaaaaatcactacgcttgagagtatttttcat
ttaaaatttaatgattttgaaggtttggaaggctttaaagaaaagaaaattaacaatctt
ttaaatgccatagaacaagcaagagaatgtgagctttttcgttttatcacagctttagga
atagagcatattggcgaggttgcggctaaaaaattaagtttaagttttggtgaagagtgg
tacaagcaaagctttgaagcttatgccaatttagaaggttttggagagcaaatggcttta
agtctttgcgaatttacgcgtgttaatcgcacaagaattgatgagttttacaagctttta
aatttgaaaatagaaaaacttgaaatcaaaagcgatggtgtgatttttggtaaaactttt
gtgattacaggcactctttcacgcccaagagatgagtttaaggctttgatagaaaagctt
gggggtaaggtaagcggctcggtttctaaaaagactgactatgtgctttttggagaagag
gcaggttctaagcttagtaaggctaaagagcttgaagtaaaatgtatagatgaaagtgct
tttaatgagcttgttaaagaatag
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