Comamonas kerstersii: B5M06_02385
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Entry
B5M06_02385 CDS
T04758
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
cke
Comamonas kerstersii
Pathway
cke00300
Lysine biosynthesis
cke00550
Peptidoglycan biosynthesis
cke01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cke00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B5M06_02385
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
B5M06_02385
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cke01011
]
B5M06_02385
Enzymes [BR:
cke01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
B5M06_02385
Peptidoglycan biosynthesis and degradation proteins [BR:
cke01011
]
Precursor biosynthesis
Amino acid ligase
B5M06_02385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AQZ97287
LinkDB
All DBs
Position
complement(514827..516332)
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AA seq
501 aa
AA seq
DB search
MAVSSAIKQIQDLQQAVAWLRARVSGHLRTDSRQVQPGDGFIAWPGGVTDGRKYVAAALE
RGAAACLVEQDGLQAFDLQGPVASMTGLKAATALIADAWYGQPSGQLQVLAVTGTNGKTS
TAWWLAHALAQYQHGVRKGCAMVGTLGIGVPPAVQTTGMTTPDPVCLQQAFADYAAQGIA
ACAIEASSIGIEEHRLDGTQIHAAIFTNFTQDHLDYHGSMDAYWQAKARLFAWPGLKAAV
INIDDAHGAALAQDLMAQGQLDVWTVAVDAPARLQAKDVRHGLRGLRFEVQEGEQVFTME
TGLIGQYNVSNMLGVLATLRTLGIGLVDAVQICADLEPVPGRMQQIALPEQPLVVVDYAH
TPDALEQALKGLRPVARARGGQLHCVFGCGGNRDATKRPLMGQAAQRQADVVWVTSDNPR
GEVPDAIVQDIVQGMQLQGVHVQVDRTQAITQAIAQADAHDVVLLAGKGHEDYQEIQGVK
YPFSDMDKARGALALRKGSSK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atcgctgtgagcagcgcaatcaagcaaattcaagacctgcagcaggcagtggcgtggctg
cgcgcccgtgtgagcggtcatttacgcaccgacagccgtcaggtgcagcccggcgatggt
tttattgcatggccaggtggtgtcaccgatggccgcaaatatgtggcagcagcgctggag
cgcggcgcagcagcttgcctggtcgagcaggatggcctgcaagcctttgacctgcagggg
cctgtggccagcatgacgggtctgaaggcggcgaccgccctgattgcggatgcctggtat
ggccagccctcgggccagctgcaggtgctggcggtgactggtaccaatggcaagacgtcg
acagcctggtggctggcgcatgcgctggcgcagtaccagcacggcgtgcgcaagggctgc
gccatggtcggtacgctggggattggcgtgccacctgcggtacagaccaccggcatgacc
acgccagaccccgtgtgcctgcagcaggcttttgccgactatgcagcccaaggcattgct
gcctgtgccatcgaagcttcttcgatcggcattgaggaacatcgcctggatggcacgcag
atccacgccgccatctttaccaatttcacccaggatcacctggactaccacggcagcatg
gatgcctactggcaggccaaggccaggctgtttgcatggccgggtctgaaagccgccgtc
atcaatatcgatgatgcacatggcgcagcactggctcaggacttgatggctcagggtcag
ctggatgtctggacggtggctgtcgatgcaccagcccgtctgcaagccaaagatgtacgc
catggcctgcgcggcctgcgctttgaagtgcaggagggcgaacaggtcttcaccatggag
accggtctgattggccagtacaacgtcagcaacatgctgggtgtgctggccacgctgcgc
acgctgggcatcggcctggtggatgcagtgcagatctgtgccgatctggagcctgttccg
ggccgcatgcagcagattgccctgcccgagcaaccactggtggtggtggactatgcgcat
acgcccgatgcgctggagcaggccctcaaaggcctgcggcctgtggccagggcgcgtggc
ggccagctgcactgtgtgtttggctgcggaggtaaccgcgacgcgaccaagcgccccctg
atgggccaggctgcacagcgtcaggctgacgtggtctgggtgaccagcgacaacccccgt
ggtgaagtacccgatgccattgtgcaggacattgtgcagggcatgcagctgcaaggcgtg
catgtgcaggtggatcgcacacaggccattacgcaggccattgcccaggcggatgcccac
gatgtggtgctgctggcgggtaaggggcatgaggactaccaggaaatccagggtgtgaag
tacccgttttccgatatggacaaggcgcgcggagcattggctttgcgcaaaggaagtagc
aagtga
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