Corynebacterium kroppenstedtii: ckrop_0912
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Entry
ckrop_0912 CDS
T00896
Symbol
pafA1
Name
(GenBank) proteasomal accessory factor
KO
K20814
Pup amidohydrolase [EC:
3.5.1.119
]
Organism
ckp
Corynebacterium kroppenstedtii
Brite
KEGG Orthology (KO) [BR:
ckp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ckp03051
]
ckrop_0912 (pafA1)
Enzymes [BR:
ckp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.119 Pup amidohydrolase
ckrop_0912 (pafA1)
Proteasome [BR:
ckp03051
]
Prokaryotic proteasome
Bacterial regulatory particles
ckrop_0912 (pafA1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
ACR17666
UniProt:
C4LIL1
LinkDB
All DBs
Position
complement(1083106..1084668)
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AA seq
520 aa
AA seq
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MLHNQPRVIGTETEFGISCPENPAVSPILTSTAAVMSYADALGLGARRTRWDYEPESPLR
DARGFDLRRYAMNHAPVLEPNAMGAANIILRNGARFYVDHAHPEYSSPEVTDALSAVIWD
KAGEIIMHRAARAATQAGIGQDQEHWDLKTYKNNVDGKGASYGTHENYLYRRDTDMATIE
QGLIPFFVTRQIMTGAGRVGLGQQGDTAGFQISQRADYIETKVSLETTLNRGIINTRDEP
HSNADEWKRLHVIIGDANLSEYSQFLKVGTTSLVLDAIEAGVDFSDLALESPVDDVYRVS
RDLTCTATLRGEDRKTERTAIDIQRIYRDRVIDAADRGVISLSDVEKKVIEVWGEILDDL
ESDPLSTADRLDWTAKYALLDGFRQRGTGEWDDPRLALIDLQYSDCDPEKGLYYALVRRG
KIRTLVDPDDVTAAIDTPPTDTRAWLRGRLVDRFSSEVIAANWDNLIVTPTHPQRIELSS
PTAANATATYDITESAKSVDDVTRYLTSSGVCDVTPLPSP
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcttcataaccaacccagagtgatagggacagaaaccgaattcgggatttcgtgcccc
gagaaccccgcagtcagccctattttgacatcgacggccgctgttatgtcgtatgccgac
gcgctggggctgggtgctcggcggacgcgctgggattatgagcctgaatcgcctcttcgt
gacgcgcgcggattcgatcttcgccgatacgctatgaatcacgcgcccgtgttggaaccc
aatgccatgggagcggccaatatcatccttcgcaatggcgcacggttctatgtggatcac
gcccacccggagtattcatcccccgaggtcacagatgcgttgtcggcggtgatctgggat
aaagccggagagatcattatgcaccgggctgcgcgtgctgctacgcaggccggcatcggg
caagatcaggagcattgggatctcaagacatacaagaacaatgtggatggcaagggtgcc
tcatacggaacccatgagaactacctgtatcgccgcgacacggatatggccacgattgaa
caaggactgatccctttcttcgtgacgcgccagattatgactggagctggtcgcgtcggc
cttgggcagcagggggatactgccggattccaaatttcgcagcgtgctgactacatcgaa
accaaggtatcgctcgagaccacgctgaaccggggcatcatcaacacccgcgatgagccc
cactccaatgccgacgaatggaaacgcctccacgtcatcattggggacgccaacctgtcc
gagtattcacagttcctcaaggttggcaccacgtcacttgttctcgacgccatcgaagcc
ggggttgatttctctgacctcgccctcgaatcaccggtcgacgatgtctatcgcgtctca
cgcgacctcacgtgtacggcgaccctgcgcggggaggatcgaaagactgagcgcacagcc
atcgacattcagcgtatctaccgggatcgggtgatcgatgccgctgatcgcggggtcatc
agcctgagcgacgtcgaaaagaaagtgatagaagtctggggcgagatccttgatgactta
gagtccgaccccttgtcgacggctgatcgtctcgattggacggcgaaatatgcgctgctc
gatggttttcgacagcgcgggacaggggagtgggatgatcctcggctggccctcattgat
ttgcaatacagcgattgtgatcctgagaaggggctttattacgccctggttcgacggggg
aagatccggacactcgttgaccccgacgatgtgacggcagcgatcgacacgccgcccacc
gatacacgggcttggctcagaggacgattggtggaccgtttttccagtgaggttatcgcg
gcgaactgggataatctcatcgtcacgccaactcacccgcaacggatcgagctgagctca
ccgacggccgccaacgccaccgcgacctacgacatcactgagagcgcaaagagcgtcgat
gatgtgacgcgttatctcacgtcgtcaggtgtctgcgatgtcacgccgctcccgagtcca
taa
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