Clostridium kluyveri NBRC 12016: CKR_1082
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Entry
CKR_1082 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ckr
Clostridium kluyveri NBRC 12016
Pathway
ckr00300
Lysine biosynthesis
ckr00550
Peptidoglycan biosynthesis
ckr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CKR_1082
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CKR_1082
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ckr01011
]
CKR_1082
Enzymes [BR:
ckr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CKR_1082
Peptidoglycan biosynthesis and degradation proteins [BR:
ckr01011
]
Precursor biosynthesis
Amino acid ligase
CKR_1082
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
HisZ-like
Motif
Other DBs
NCBI-ProteinID:
BAH06133
UniProt:
B9E0V8
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All DBs
Position
1231411..1232868
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AA seq
485 aa
AA seq
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MNLKDVLRGIDYKIIKGKNNLNIGEIQYDSRKVKTGDLFVCIAGYVTDGHKYIESAFKNG
AAAIVLSKKVDFIPDCTVIEVKDTRKALALMSSNYYDNPAEDMKIIGITGTNGKTTSTFM
VKSILETAGYKVGVVGTISNYIGNKKIPSHRTTPESLELQKLFKEMVDDGVDYCVMEASS
HSLYLDRVYGVEFCQALFTNLTRDHLDFHKTFEEYYKSKIILFKNTVNSVINIDDKYGER
VYEDAKGKKLTYAIDKNADLMADNLKIHSRGVNFNISYEGNTKHINLNIPGKYNVMNALG
SAGVCLAEGIDLNTVKKGLEDMPSVPGRCEIVTKSYNLGYEVVVDYAHTPDGLENILKCA
REFTKGKLISVFGCGGDRDSTKRPIMGNIGTKFSDFAVVTSDNPRGEEPMAIIKDILTGI
KKNNYIVIENRKEAIKKAMEMAETGDVVVIAGKGHEDYQILKDRTIHFDEREIVAEIIEE
STVNN
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
ttgaatctaaaagatgtattgaggggaatagattacaaaattattaaaggaaaaaataat
ctaaatataggagaaattcaatatgattcaagaaaagttaaaactggagatttatttgtc
tgtattgcagggtacgttactgatggacacaagtatatagaaagtgcctttaaaaatgga
gcagcagcaattgtattaagcaagaaagttgatttcattcccgattgcactgtaatagaa
gtaaaagataccagaaaggcattggcactcatgtcatcaaattactatgataatcctgct
gaagatatgaaaataataggtataactggtaccaatggcaaaactacctccacatttatg
gtaaaatctatattggagactgcaggttataaagtgggagtggtaggtaccatatcaaat
tatataggaaataaaaagataccttcccataggactacacctgaatccttagaacttcag
aaattattcaaggaaatggtagatgatggtgtggattattgtgttatggaagcatcttct
cattccttatacctagatagggtatatggagtagagttttgtcaggctctattcacaaat
ttaaccagagatcatctggattttcataaaacctttgaagaatactataaatcaaaaatt
attctatttaaaaatacagttaattctgtaataaatatagatgataaatatggagaaagg
gtatatgaagatgccaagggtaaaaaattaacctatgctatagataaaaatgcagatttg
atggcggataatttaaaaattcattccagaggagtaaattttaatatatcatatgaaggg
aatacaaagcatataaatttaaatataccaggaaagtataatgtaatgaatgctcttgga
agtgcaggggtttgtctggcggaaggaatagatttaaatactgtaaaaaaaggattagaa
gatatgccttctgtgccaggtagatgtgaaatagtcacaaaatcatataatttgggatat
gaagttgtagtagactatgctcatactccagatggacttgaaaatatattaaaatgtgcc
agggaatttaccaaaggaaaacttatttctgtatttgggtgcggtggagatagggatagc
actaaaagacctataatgggaaacataggtacaaaattttctgattttgcagtagtgact
tctgataatcctaggggagaagagcctatggctataataaaggatatactaacaggtatt
aaaaaaaacaattacattgtaattgaaaatagaaaagaagccataaagaaggctatggaa
atggctgaaacaggagatgtagtagttatagcgggaaaaggccatgaagattatcagatt
ctaaaagatagaacaatacattttgatgaaagagaaatagtagcagaaatcatagaggaa
tccacagttaacaattaa
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