Chitinimonas koreensis: H9L41_20960
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Entry
H9L41_20960 CDS
T08620
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cks
Chitinimonas koreensis
Pathway
cks03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H9L41_20960 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cks03400
]
H9L41_20960 (nth)
Enzymes [BR:
cks01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H9L41_20960 (nth)
DNA repair and recombination proteins [BR:
cks03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H9L41_20960 (nth)
Prokaryotic type
H9L41_20960 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
QNM96246
LinkDB
All DBs
Position
complement(4956517..4957149)
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AA seq
210 aa
AA seq
DB search
MNKDSRREFFERLRAHNPEPRTELEYSTPFELLVSVVLSAQATDVGVNKATRKLYPVANT
PAAIHALGVEGLEDYIRTIGLYRSKARHVIEMCRLLMERHDGRVPETREALEALPGVGRK
TANVVLNTAFGQPTMAVDTHIFRVSNRTGLAPGKDVRAVEDKLVKVIPKEFMLDAHHWLI
LHGRYVCKARKPDCPVCVVRELCEYKAKTT
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggacagccgccgcgaattcttcgagcgcctgcgcgcccacaatcccgagccg
cggaccgagctcgagtacagcacgccgttcgagctgctggtctcggtggtgctgtcggcg
caggcgaccgacgtcggggtgaacaaggcgacgcgcaagctctacccggtggccaatacg
ccggccgcgatccatgcgctcggcgtcgagggcctggaggactacatccgcaccatcggc
ctctaccgcagcaaggcgcgccacgtgatcgagatgtgccgcctcctgatggagcgccac
gacggccgggtgcccgagacgcgcgaggcgctggaggcgttgcccggcgtcggccgcaag
accgccaacgtggtgctcaacaccgccttcggccagccgaccatggcggtcgacacccat
atcttccgcgtctccaaccgcaccggcctcgcgcccggcaaggacgtgcgcgcggtcgag
gataagctggtcaaggtgatcccgaaggaattcatgctcgatgcgcaccactggctgatc
ctgcacggccgctacgtgtgcaaggcgcgcaagcccgactgtccggtctgcgtggtgcgc
gagctgtgcgaatacaaggccaagacgacatga
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