Clavelina lepadiformis (light-bulb sea squirt): 143445813
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Entry
143445813 CDS
T11416
Name
(RefSeq) F-box/WD repeat-containing protein 7-like isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
143445813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143445813
04121 Ubiquitin system [BR:
clep04121
]
143445813
Membrane trafficking [BR:
clep04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
143445813
Ubiquitin system [BR:
clep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
143445813
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR75_1st
DSE1_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
F-box-like
Beta-prop_Nup120_160
ANAPC4_WD40
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_ACSF4
Beta-prop_RIG_2nd
TRM82_WD
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
CFAP251_N
Beta-prop_Aladin
F-box
ASA1
Beta-prop_NOL10_N
Beta-prop_VPS8
PQQ_2
Beta-prop_NWD2_C
Beta-prop_RIG_1st
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
143445813
NCBI-ProteinID:
XP_076801257
LinkDB
All DBs
Position
1:complement(22044747..22058809)
Genome browser
AA seq
763 aa
AA seq
DB search
MIMSCKESKTKPSKAECTRTKRRALEGPQRGKAPTFKSKQRVQKCKSLDFPISLVQAFGG
SPRTDSDLKKNMSENIFVPRMTRRTRSSGKSDVSQHIFDAADMTPDTEVDLFTLYSGGCM
TRGQMNKVKQIFGEPSNFEMKVECPVKRKSKLVVKKSLEHNLELIQEDSPETTILDMPMK
MTRSQTIKTKLKRKREVLNEPAKSPEKKACKSSIGSVISARTAIVPKSDAFEQKPATRRG
LFTQNSRLPTPNDDCESFPSNNYTKEAISAPTTPTRSLYVPDGTDDWLHRFLRWSAKDKI
HVLDNLINVCQPHEVRHMLEIIEPQFQRDFISLLPKELALYVLSFLEPRDLLMAAQTCKY
WRILAEDNLMWREKCMEEGIQEPYVSKVIKNSWKSKKNNAIGVCSAWKAAYLRQVRIEMN
WRDGNEKISKVLKGHDDHVITCLQFNGSRIVSGSDDNTLKVWSAVSGKCLRTLTGHTGGV
WASQMRKNLIISGSTDRTLKIWNSDTGACVHTLYGHTSTVRCLALHENIVVSGSRDATLR
VWDIDTGACLHVLMGHMAAVRCVCYDGRKVVSGAYDYMIKVWDPETEECLHTLQGHTNRV
YSLQFDGTYVVSGSLDTSIRVWEVETGTCLHTLMGHQSLTSGMELKNNILVSGNADSTVK
VWDILTGECLKTLLGTNKHLSAVTCLQFHGKFVITSSDDGTVKLWDIKTGKVIRDLVTLE
SRGSGGVVWRIRASQTKLVCAVGSRNGTEETKLLVLDFDPDTK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgagttgtaaagaatcaaaaactaaaccaagcaaagctgaatgtactaggaca
aaacgtagagctttggagggaccacagcgagggaaagctccaactttcaaaagcaaacaa
cgtgtacaaaaatgtaaatcgcttgattttcccatctctttagtgcaagcttttgggggt
tctcctcgaacagatagtgatttgaagaaaaatatgtccgagaacatatttgttccgagg
atgactcgaaggactcgttcatctggaaaatctgatgtgtctcagcatatttttgatgca
gcagacatgacaccagacacagaagttgaccttttcactttgtattctggtggttgtatg
accaggggccagatgaacaaagtgaaacagatatttggtgaaccatctaactttgaaatg
aaagttgagtgcccagtaaaacggaagtctaaattggttgtcaagaaatcactggaacac
aatttagaattgatccaagaagattctccagagacaactattttggacatgcctatgaaa
atgacacgatctcaaactattaaaacaaagctgaaacggaaacgggaagttttaaacgaa
cctgcgaaatcaccggaaaagaaagcgtgcaagtcttcgattggatccgtgatatcggct
cgtacggccattgtaccgaaatctgatgcatttgaacaaaaacctgctactaggagaggc
ctgtttactcaaaactcaagactacctacaccaaacgacgattgcgaaagtttcccatct
aacaactacacaaaagaagccatatctgcgccgactacgccgacgagatcgttgtatgtg
ccggatggaaccgacgactggctgcacaggtttttacgatggagcgctaaggacaagatc
catgtgttggataatctgatcaatgtctgccaaccacatgaggttcgtcacatgctggag
atcatagaacctcaatttcaaagagattttatttccttgctccccaaggagcttgcgctg
tacgttctgagctttctcgaacctcgagatctcctcatggccgctcagacctgtaaatac
tggagaattctggcggaggacaacctgatgtggcgggagaagtgtatggaggagggcatc
caagagccctacgtgtccaaggtcatcaaaaactcctggaagagcaagaagaacaacgca
ataggagtgtgcagcgcatggaaggcggcctacctccgacaagtcaggatagagatgaac
tggcgagatggcaatgaaaaaatttcgaaagttttaaagggccatgacgaccacgtgatt
acctgtcttcaatttaacggatctagaatagtcagtgggtcagatgacaatacgctaaaa
gtctggtccgccgtatcaggaaagtgcttgaggacgttaaccggacacacgggaggagtt
tgggcatcgcagatgaggaaaaatttgatcatcagcggatccaccgacagaaccttaaaa
atatggaactccgacacaggtgcttgcgtccacacactttacggccacacttccactgtc
agatgtctggcgttacacgaaaacatcgtcgtgagcggttccagagacgctacacttcga
gtttgggacatagacaccggtgcttgccttcacgtactcatggggcatatggcagcagtg
cggtgcgtgtgttacgacggccgcaaggttgtatcaggagcatatgattacatgatcaag
gtttgggatccggaaacagaagagtgcctgcacacattacaaggccacactaaccgagtc
tattcacttcaattcgacggtacctacgtggtgagcggtagcctggacacctccatacgc
gtgtgggaggtagaaacaggaacgtgtttgcacacgctcatgggccaccagtcactgacg
tctggcatggagctgaaaaataatatcctggtgtcaggaaacgccgattcgaccgttaaa
gtttgggacattttgactggagaatgtttgaagacattactaggcactaacaagcatctt
agtgctgtaacatgccttcaatttcacgggaaatttgtcataacaagttctgacgacgga
acggtaaaactgtgggacataaaaacaggaaaggttatccgcgacctcgtcacgttggag
tcgcgaggttcgggcggtgttgtttggagaatccgcgcgtcacaaaccaaactggtttgt
gctgttggcagcaggaacgggactgaggaaacaaaacttcttgttttagatttcgatcct
gatacgaagtga
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