Clavelina lepadiformis (light-bulb sea squirt): 143445957
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Entry
143445957 CDS
T11416
Name
(RefSeq) short transient receptor potential channel 5-like isoform X1
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clep01009
]
143445957
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clep04040
]
143445957
Protein phosphatases and associated proteins [BR:
clep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
143445957
Ion channels [BR:
clep04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
143445957
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
143445957
NCBI-ProteinID:
XP_076801493
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Position
2:20911175..20918171
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AA seq
971 aa
AA seq
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MENLQAAFFSKSRTDPINWNKTRATSDLEREQTSTQTPEASTSHGSFNQRTEEKEESQQQ
GGHTNEDQMRSQNYVPQQKVELLDKNLSKKNSEKENEDSGQKKSDQGEDVKVIKRRVQGE
LQKLQSRKLVKSYCFEKVASNNVNDVNVLFSLDNSDFREELVDFRNRHGARALKIAIKKE
NVNMCETLLDHGVDIGDNLFYAIKRNFLGGVETILKRDACVEAKIEGKKAKFPAGTTPTL
LAALNNNYEILKLLHEYKHNELKEPECKRMYIKWEEANLWRLTWEAKTNKEYIVFICEAS
DKNQLDYCMDQMEQLRKCAEGRQEFRNFCKDRETKLENFMCSLLDEVRSSEELAKLFDIA
DDKDDGDRKRLPEPQRFLEKASKLKLKKFVTHPFSQLALDNIRYGHFDEFHSHPFFTNFF
GKRLLGLCFPFLAIIHLVAPKNKFGKIITLPQILHECHLMSDLSFLAILITILITKTASM
DYLGAPPTTLEKLALIWFPGRVIQEIEECVNYGWKNYVEEWWNYNDILQLVLFSITIAFR
CVDYYAYAHYDVIPENERIYRADWKPWEPRLLASGFLAWTYVFVFLRTLRLVKPNRILGP
LQVSLSRMMVNAIEFLLFFCLVIFAFGLGLTEVYWYDGTAEAIAARCGNATTIDHCNDPF
FGNLVKSLLELYWTLFGYVDPYQIDLNTSYNFTQWVASSLFAMYHVVAIIIMLNMLIAMM
SKSYDVISENKEVEWKFQSSITWIHYSRGQFILPPPMNIVPHFFAIYEFCRKHSQKRNTC
RKEVDIEKTEGTLRPSGRHSDIITHDTTLPPEPPPRSPLHQTSHISNEDVIYRSNPGAKP
SRPGVGTRQKAFTPIPQDSIYTFDDYDEYGDDIYYQPAYNFSRDLSSSITRRPSLYSYSA
PTASSRPQSVFNNLVPVTQWNRKRPSQKFLSHLEEDNENDSSKDLVHTLAKRHLASEYQQ
TYIDFSPKLYY
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctccaagcagcttttttttcaaaatcgcgcactgaccccataaactggaat
aaaacaagagcaacttcagatctggaaagggaacaaacttcaactcaaacgcccgaagca
agtacctctcatggatcctttaaccagagaacagaagaaaaggaagaaagccaacaacaa
ggaggccacacaaatgaagaccaaatgcggtcccaaaactatgtgccacaacagaaagtg
gaactattagacaaaaatctttcaaagaaaaattcagaaaaagaaaacgaagattcaggt
caaaaaaaatctgatcaaggcgaagatgttaaagtcattaaaagaagggttcaaggagaa
ttgcaaaagttgcagtcgcgcaaactggtgaagtcttactgctttgagaaggtggcgtca
aacaatgttaatgacgtcaatgtgcttttttcgcttgacaactcggacttcagggaagag
ctagtcgactttcgtaaccgacatggggcaagagcactcaagattgcgatcaaaaaggaa
aacgtcaacatgtgtgaaacgttactagaccatggggtagacataggcgataacctcttc
tacgcaatcaagcgaaattttttgggcggtgtggagacgattttgaaacgcgatgcatgt
gtggaggcaaaaatagaaggcaaaaaggctaaatttcctgctggcactacaccaacatta
ttggcagcattaaataataactatgaaatattgaaactgcttcatgaatataagcacaac
gagttaaaggaaccagaatgtaaaagaatgtacatcaaatgggaagaagccaacttatgg
cgtttaacgtgggaagcaaaaactaataaagagtacattgtcttcatatgtgaggcttct
gacaaaaaccagttagattactgcatggatcaaatggaacaactgaggaaatgtgcagaa
ggcagacaagaattcagaaatttttgcaaagatcgcgaaacgaagttggaaaattttatg
tgctctttgctggatgaggtacgctcgtctgaagagctcgctaaattatttgatattgcc
gacgataaagatgacggggatcgtaaacgccttcctgagcctcagcgttttctggagaaa
gccagcaagctaaagctgaagaagtttgtcacacaccctttttcacaacttgccttggat
aatatccgatatggacattttgatgaatttcacagccatccgtttttcacaaattttttt
ggcaaacgtttgctcggtttgtgctttccattccttgcaattattcatctcgttgctcca
aagaataaatttggaaaaattattactctgccccaaattttgcatgaatgtcatttgatg
tctgacttatcatttttggcaattttgataacaatcctcattacgaagacggcttcaatg
gattatttaggtgcacccccaaccactctggaaaaactcgcacttatttggtttccgggt
cgagtgatacaggaaatagaagagtgcgttaattatggctggaaaaactatgttgaagaa
tggtggaattataatgacattcttcagcttgtactgttttcgattaccattgcatttagg
tgcgtggattactacgcttacgcgcactatgatgtaattccggaaaatgaaagaatttat
cgtgctgattggaagccgtgggagccaaggttacttgcatccgggttcttagcctggacg
tacgtgtttgtctttttgcgaacacttcgcctcgtcaaaccaaaccggattttgggtcca
ttgcaggtttctctaagtcgaatgatggtcaatgccattgaatttcttctttttttctgc
ttggtcatatttgcctttggtctgggattaacagaagtgtattggtacgacggtacagct
gaggcgatagcagcacgttgcggtaatgcgaccacgatcgaccactgcaatgatccgttt
ttcggcaatctagtgaagtcacttctcgagttgtattggacactatttggttatgttgat
ccctatcaaattgaccttaatacgagctacaactttactcaatgggtcgcaagcagtctc
tttgcaatgtaccacgttgtcgccatcatcatcatgctcaacatgctcattgcaatgatg
agcaagtcttatgacgtgatcagtgaaaacaaggaagtggaatggaaatttcaaagctcc
atcacttggattcattacagtcgtgggcagttcatacttccaccgccaatgaatatcgtt
ccgcatttctttgcaatatatgagttttgccggaaacattcgcaaaagcgcaacacgtgc
aggaaagaagtggacatagaaaagactgaaggaaccttacgaccctctggaagacattca
gacattataacacacgatacaacgttgccgccagaaccaccacccagatccccgcttcat
caaacctcacacatatccaacgaggacgtcatttatcgaagtaatccaggagcgaaaccc
tcaaggcctggcgttggcaccagacaaaaagcatttacaccaattcctcaggactctata
tacacttttgatgattatgatgagtacggcgatgatatatactaccagccggcatataac
ttttcccgagatttaagttccagtatcacgcgaagaccatccctttattcgtattccgct
cccactgcttcctcaagaccacaatccgtcttcaataatttggtccccgtaacgcaatgg
aaccgaaaaaggccctcccaaaagttcctcagtcacttggaagaagataacgaaaacgac
tcatcaaaggacttagttcataccctcgccaaaagacacttagcatccgaatatcaacaa
acctacattgatttcagtccgaagttatattattaa
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