Clavelina lepadiformis (light-bulb sea squirt): 143446587
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Entry
143446587 CDS
T11416
Name
(RefSeq) cystathionine beta-synthase-like protein isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep00260
Glycine, serine and threonine metabolism
clep00270
Cysteine and methionine metabolism
clep00670
One carbon pool by folate
clep01100
Metabolic pathways
clep01230
Biosynthesis of amino acids
Module
clep_M00035
Methionine degradation
clep_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
143446587
00270 Cysteine and methionine metabolism
143446587
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
143446587
Enzymes [BR:
clep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
143446587
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
CBS
sCache_3_2
Motif
Other DBs
NCBI-GeneID:
143446587
NCBI-ProteinID:
XP_076802403
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All DBs
Position
2
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AA seq
531 aa
AA seq
DB search
MSGKCPISGNGAGDADSWIRPDQPPKCTWDASGSKPSPHFVYRPVRDRKTTFATVLEAIG
DTPLVRLSKIEKEYGLKCQLFGKCEFFNAGGSVKDRIGLRMVEDAEREGIIKPGYTIIEP
TSGNTGIGLALASAVKGYRCIIVMPEKMSMEKVNVLKALGAEIVRTPTSARFDAPESHIR
VAQKLQREITNAVILDQYRNPGNPLAHYDTTAEEILEQCGGQVDMVVGGAGTGGTITGIG
KKFKEKCPKCRVIAVDPEGSDLALPEELNKTDTTYYEIEGIGYDFIPTVLDRSVVDKWYK
SNDKESLIMARKLIRMEGLLCGGSSGTAAYIAAEAAKELKEGQKCVCILPDSIRNYMTKH
LMEEWMMERDFIPCTDKDDKWWSKLTISDMKLQAPVAIMPETKCEEALKIMETHNFDQLP
VINKDGKMVGTVTVGSLTSSFSADKVKLTDPVSMCLYSKFKKMKVGDKLTTLSKVLETDH
FVVVLGSKVQYNLVEPDSLTLSEMRIDGGAPDSVCGIITPVDFLHFISSKH
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaaatgtccaatttcgggaaatggtgctggtgacgcggattcgtggatacga
ccagatcaacctcccaagtgcacctgggatgcaagtggatcaaaaccttcaccgcatttt
gtttacaggccggttcgtgatagaaagacgacattcgcaacggtccttgaagcaatcggt
gacacaccattggttcgtttgagcaagattgagaaggaatacggcctaaagtgccagctg
tttggaaagtgtgagtttttcaatgctggcggatcagtgaaggacagaattggcttaaga
atggttgaagatgctgaaagagaagggatcattaagcctggctacacgatcattgaacca
acttctggaaacaccggtattggcctcgctctggcttctgctgttaaaggatatcgttgt
atcattgttatgcctgaaaagatgagcatggagaaggtaaacgtcctgaaagcactaggg
gctgaaattgtgcggactcctacaagtgcacggtttgatgcgccggaatcccatatcagg
gtggcacagaaactacagagggaaattaccaatgctgtcattcttgatcaatatcgaaat
cctggaaaccctcttgcacattatgacacaacagcagaagaaattctagagcaatgtgga
ggccaagttgacatggtggttggaggagcaggaacaggaggaactatcactgggattgga
aaaaaatttaaagaaaaatgcccaaaatgccgggtaattgccgttgatcctgaaggctca
gatctggcacttcctgaagaacttaacaagaccgatactacttattacgaaattgaaggt
attggctatgacttcatacctacagtcctggacaggtcagtggttgacaaatggtacaag
tctaatgacaaggaatccctcataatggctcgcaagttaataagaatggaaggattattg
tgcggtggaagcagtggaaccgccgcatatatcgctgctgaagccgcaaaagagttgaaa
gaaggccaaaaatgtgtttgcatcttaccagattcaattagaaactacatgaccaaacat
ttaatggaagaatggatgatggagagagactttataccatgcacagacaaagatgacaaa
tggtggtccaagttgactatcagtgatatgaaattacaagccccagttgccattatgcct
gagacaaagtgcgaggaggcgttgaaaataatggagacccacaactttgaccagttaccg
gtcataaacaaagacggaaaaatggttggaacagttactgtaggaagcctgacttcttct
ttcagtgccgataaagtgaaactgactgatccagtgtcgatgtgtttgtactctaagttc
aaaaagatgaaagttggtgacaaactcaccaccttatcgaaagtgcttgaaactgatcac
tttgtcgtagtattgggttcaaaggtgcaatataacttggttgaaccagactcactcact
ctcagtgaaatgagaattgatggaggagcgcctgacagcgtatgtggcatcataactccc
gtcgattttctacacttcatttcgagcaagcattag
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