Clavelina lepadiformis (light-bulb sea squirt): 143448348
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Entry
143448348 CDS
T11416
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37-like isoform X1
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
143448348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clep04121
]
143448348
Enzymes [BR:
clep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
143448348
Ubiquitin system [BR:
clep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
143448348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143448348
NCBI-ProteinID:
XP_076804161
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Position
3:289498..295224
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AA seq
1054 aa
AA seq
DB search
MADHQVERMAEVFRCFICMSKVRDARLCPHCSKLCCFLCIRRWLTEQRQQCPHCRASLQV
GDLVNCRWAEELTQQLDTLRHPVTENTTSTSHKPEERKDVCEIHEEKLSVFCWTCQLCIC
HQCALWGGTHGGHTFKPLNEVYDQHISEISDEEIAIRRRLIELISLVQDVERNVESVRSA
KDERVREIRNAVEMMIARLDGQLKNKLITLMGQKNQLTQETEMLESVLKEVEHQRMSCSR
QELITRSSEMLEMFRAIHRKPMASFVSASVPPDFTSELVPQYDSISFTLHRFSQLRQSAD
PVYSKPLSVSGLCWRLKIYPDGNGVVRGNYLSVFLELSSGLSETSKYEYRIEMVHLATND
PSRNIIREFASEFDVGECWGYNRFFRLDLLAQEGYLESTSDTLALKFQVRAPTFYQKCRD
QQWYINQVGAQQTQQLDQIRNLKDRLAIEVARANSSCAPLKGEHREQNIDGSSSLVQPCS
LEHDVVDGVSHDSAADGSPTDDVNAPLILAVVQIDDVIGESCEDNDLTEEDVDADHDPDI
SEWEIEEESVMVGDVDGPASYFLEENDVDNETMSGDNDVDDARLRSSTEDSTLDLFGALN
PNDSASWELPNSQLMTSQMGSLYWIQNSHKSTARKKTNKKVLCGHVTGHRFSKHFSSRSK
PRSVTSSKKKRISSNFTSNHEGNNSLLALLRHTRHCEAVTSSIPSALTTMSSGSSMMSSS
SSMMSSESDYHGNSGRSPRGASFKGESSKNGAGSGDRRRWESSFKNLREQLSELTDTVAT
ATNSINSARSPRRAPSSNPVSEMRVSKSENSLSSMTVKKERKSKSPSKQTSSADGISGND
LFWAESQSYDWKRSQSSHSTNHIRSLFGDHGDGRHRQRAVEKAHCSKDSSPRKRPTIDEA
SPHSMPARGVNPTDLASALASVTIDEEKAKKKPVIPPKPRRNLNPANLDHDSLPLEVASS
LQLHASNSPQDGELENTSMLVPGTPSVVESDDIISFNESPQPDTRSQGVSTNKQAASSNV
VISDDVSSDGLDLIYLQGKGCYSDDSTYVISDDD
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccaccaagtggagcgaatggccgaggttttccgctgcttcatctgcatgagc
aaggtgcgagatgccaggctgtgtcctcactgctccaagctctgctgcttcctttgcatt
aggcgatggttgacagaacaaagacagcaatgcccacactgcagggcttcattgcaagtt
ggtgacctcgtcaattgtcggtgggcggaggaattaacccagcaactcgacactttgcgc
catccggttacagaaaacactacatcgacatcacataaacctgaggagaggaaagacgta
tgcgagatccatgaagaaaagttgagtgttttctgctggacgtgtcagctctgtatctgc
caccagtgcgcgctgtggggtggaacccatggaggccacaccttcaagccactcaacgag
gtttatgatcaacatatctctgaaataagtgatgaggaaatcgcaatcaggaggagactc
atcgagctcatatcgctcgtgcaggacgtggaacgcaatgtggagagcgtgagatctgct
aaagatgagagagtccgcgagatcaggaatgcagtggagatgatgatagcaaggttggac
gggcagctcaagaacaaacttatcactttaatggggcaaaagaaccaactcacgcaggag
acggagatgcttgagagtgtattgaaggaagttgaacatcagaggatgagctgcagtcgg
caagaactaatcactcgatcaagtgagatgttggaaatgtttcgcgccatccatagaaag
ccgatggcatcgtttgtgagtgcgtcggtgccacccgactttacaagtgagctggtgcca
cagtacgactccatctctttcactttgcacagattcagtcagttacgacaaagcgcggat
cctgtttactccaaaccactctcagtgtctggactttgttggagactaaaaatttaccca
gatgggaatggagtggttcgggggaattacctctcagtgttcttggagttgtcgtctggc
cttagcgagacctcgaagtatgagtatcgcatcgagatggtccaccttgccaccaacgat
ccatccaggaacatcatccgagagtttgcgagcgagttcgacgtcggagagtgctggggt
tacaaccgattcttccgactcgatcttctcgcccaggaaggttaccttgagtcaacatca
gacaccctcgcccttaaatttcaggtgagggcgccaacattctaccagaagtgtcgagac
cagcagtggtatataaaccaggtcggcgcgcagcaaacacagcagctggaccagatacgg
aacctgaaggaccggctcgccatagaggtggcgagggcaaacagctcgtgcgccccactc
aagggcgagcaccgtgagcagaacatcgatggttcttcatcgcttgtgcaaccttgctcg
ctggagcacgacgtggtggatggtgtgtcacatgactccgcagcagacggctcacccact
gatgatgtcaatgcccctcttatcctggcggtggttcaaattgatgacgtcataggagaa
agctgtgaggataatgatctcacagaggaagatgtagatgcagaccatgatccagatatt
agtgagtgggagattgaggaggagagtgtgatggtaggagatgtcgatggacccgcttcc
tactttctcgaggagaacgatgtcgataacgagaccatgtcaggtgacaacgacgttgat
gacgcaagattaagaagttcgacggaagactcgacgttggatttattcggagccttaaac
cccaatgacagtgcatcatgggaattacccaactcgcagctgatgacatcacagatgggc
agcttgtactggatccaaaactcgcataagtcgactgcgaggaaaaagacaaacaagaag
gtgctatgtggtcacgtgactggtcatcgattctcgaaacatttctcatctcgttccaag
ccgagatctgtgacatcatccaagaagaagcgaatttcatcgaatttcacgtcaaatcat
gaaggaaacaattcgctgcttgcactattacgtcatacaaggcattgtgaggctgtcacg
tcatcgataccgtcggcactgacgacgatgtcatcaggttcatccatgatgtcatcaagc
tcatccatgatgtcatcagaaagcgattaccatggtaacagcggtcgtagcccgcgagga
gcatcttttaaaggtgaatcgtccaagaatggagcgggcagtggggatcggagaagatgg
gaatcttcctttaaaaatcttcgagagcaattatcggagctcactgacaccgtggcaacg
gcgaccaacagcatcaactccgccagatcgccgagaagagctccctcctccaatcctgtc
agcgaaatgcgtgtttccaagtcagaaaattcactttcatcgatgactgtgaagaaggag
agaaagtcgaaatctccgtcgaagcagacttccagcgctgatggaatctccggcaacgat
ttattctgggcagaatctcaaagctacgattggaaacgaagtcagtcatcgcattcaacc
aatcacattcgctctctgtttggtgaccatggtgacggtcgccataggcaacgcgcagtg
gagaaagctcattgttcgaaagattcgtcgcctcggaaacgaccgaccatcgatgaagcg
tccccccatagcatgccggctcgtggagtgaacccaactgacctcgcttctgcccttgcc
tcagtgaccatcgatgaagagaaagctaaaaagaagcctgtgattccccccaaaccgaga
aggaacttgaacccagctaaccttgatcatgactctttaccgctggaagtggcaagctct
ttgcaacttcacgcatcaaactcaccacaagatggcgaacttgagaacacctcaatgctt
gtccctggaacgccatctgtcgttgagagtgacgacatcataagttttaatgaaagcccc
caacctgatactcgttctcaaggagtttcaaccaataagcaagccgcttcttccaatgtc
gtcatatccgatgacgtcagctcagatggtctggacctcatttatttgcaagggaagggt
tgctatagtgacgacagtacttacgtcatcagtgatgacgattga
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integrated database retrieval system
