Clavelina lepadiformis (light-bulb sea squirt): 143449502
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Entry
143449502 CDS
T11416
Name
(RefSeq) toll-like receptor 7
KO
K10170
toll-like receptor 8
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
143449502
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
clep04054
]
143449502
04090 CD molecules [BR:
clep04090
]
143449502
Pattern recognition receptors [BR:
clep04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
143449502
CD molecules [BR:
clep04090
]
Proteins
143449502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_14
TIR_2
LRR_6
LRR_9
Motif
Other DBs
NCBI-GeneID:
143449502
NCBI-ProteinID:
XP_076805847
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All DBs
Position
3:complement(21807234..21810713)
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AA seq
1070 aa
AA seq
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MRCLIAFVFTGVFITCCSTKNQFDPCETGPRIRGGSVSDLVSSFSNYLETFSGRSLLDRD
YFVVNCFEKGLTSVPQMLARDVEVLDLSYNLLRWISAKDFLRYSKLTFLNLAGNCDALGS
SSSHPFCVGDFYIEPGALRHLTNLTVLNVAGNYLREFPQQLPPSILAMDISWTDLNDVSL
QLQHMHKLETLRAVGNCLILVNAHRCVRNFTITQRPSAALKNLLLEMNSWNEIPRALLSH
ELKDFSFGFNPVSRLRKDDFANATKLQKIEAPYMGSMASTRRLVVEDGVFDPLTYLQSLN
LSGNLILFLPKNVFSHNHNLEILDISYNSLTKAIIEPKFLTNLINLRSLDLSFNVANIPS
IISVDLLRLGEVFSTLLSLEELFLGTANIPVTGHSAFSLQFHKIDSQSFASLSNLSQLST
IDISYCNVHHISFDAWSGLRHLSSFRASHNTLTFDRNTVNGIRSAKQGRVFGYQLLHSPN
SMKIQQYRTKQINSAKNAFGLRSGDSNVLDLSNNRIVTFFAEPEPLLARTKMLDLSYNRI
RVIRESDLRHLKHLSAIDLSNNPLVRVDSFTFSTFSNLKEIRLVGEFVQLANLSFLCHFN
VSSKVALRWKIPVLQSELANWLDDEKCFVRSVTSLSIAQNPLRYRVHVGQEAYLSIFPDV
KRLDLSYCKLCSPIPNIWFSGLHHLDSLDLSFNNLVQFPSTALHSLMNLSALNLNFNNII
ELKGNISFLSHLRVFAISNNKINFIQTGFFSRLRLTKLDLSFNYISRLDPSILNESMLKS
LSYLDIRWNELDCSCYIWDKFYLWYISDESNSTELPGFLPECTTDIDEYFGGCVACHSPL
NLRGRPVSRYGFNTSCDLEKHFAQMLAFTIFFVMFLFCGTIGYSKWFKRLIFRKVNEYFR
VQSLKPDDAFSRKQTRNYQRAFVFFDHNNNELGDWVDNKLVPGMINGNPSVELLLAGRDI
GVGSSSTENLLQLVTSSRKTIMIFSGNFCKTPVCRFILTALQELQYSAGKNQLILVEWHG
EEAARVPELIQRTFNRKYYNFLRFNQTNDDEAMFFETLRTAFASSTILDD
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgcttaatcgcgtttgtgtttaccggcgtctttatcacttgctgctcgacaaag
aatcagtttgatccttgcgagactggtccacgaattcgcggaggaagtgtgtccgacctg
gtttcttcgttttcaaattacctggagactttcagcggaaggagcttgctcgatcgggat
tattttgttgtaaattgcttcgagaaagggttaacatcggtccctcaaatgctggcaaga
gatgttgaggtgctcgatctatcctataacctgctaagatggatttcagccaaagacttt
cttcgttactcaaaattgacttttctgaatctggcagggaattgcgacgcacttggctca
tcttcgtcacatccgttttgcgtcggtgacttttacatcgagccaggagcactacgtcac
ctcacgaacttgacagtgttgaatgttgccggaaattatttacgcgagtttccacagcaa
ctgccgccatccatactcgccatggacattagttggaccgatcttaatgacgtgtcgtta
cagcttcagcacatgcacaaactggagaccttgcgtgccgttggaaattgcctgattttg
gtcaacgcacacaggtgcgttaggaacttcacgataacgcaacgaccatctgccgcatta
aagaacttgctgttagagatgaacagctggaacgaaatacccagggcactgcttagccac
gaactcaaggatttttcctttgggtttaaccctgtatcccgattacgaaaagacgatttt
gcaaacgcaacgaaactgcaaaagattgaggcgccttatatggggtctatggcaagcaca
agacgccttgttgtagaggacggcgtgtttgatccgcttacttatttgcagagtttaaat
ctctctggcaacttgatcttgtttcttccaaaaaacgtttttagccataaccacaacctt
gaaattttggacatttcttacaatagtctaacgaaagcaataattgaaccaaagtttctg
accaatttgataaatcttcgaagcctggatttatcgtttaacgttgctaacattccttcc
ataatatcagtcgacctgctacgcttaggagaggtattttctactttactttcactggaa
gagctcttccttgggactgcaaacattcctgtgactggtcacagcgcgttctctttacaa
tttcataaaattgacagtcaatccttcgcaagtttatcaaatttatctcaactgtcaacg
atcgacatttcctactgcaatgttcatcatatatcattcgatgcgtggtctggattacgt
catcttagctcctttcgagcttcccataataccttgactttcgatagaaacacagttaac
ggtattagaagcgcaaagcaaggacgtgtctttggctaccagttgctgcattcaccaaac
tctatgaaaattcaacagtacaggacaaagcagattaattcagctaagaatgcatttggc
ttacggagcggcgatagcaatgttctagatttgtcaaataaccgaattgtgacctttttc
gcggagccagagccgttgttagcaagaactaaaatgctggatttgtcttataatcgtata
agagtaataagggaaagcgacctgagacacctcaaacatttgtccgcaatcgacttgtct
aataatcctcttgtacgggtggattctttcacttttagcactttttccaacttaaaggaa
atacgcttagtaggagagtttgttcagttggccaatttatcgtttttatgtcatttcaac
gtttccagcaaggttgctttaagatggaaaattccggttcttcaatcagaactagcaaac
tggcttgatgatgagaaatgtttcgtgagatctgtgactagccttagcattgcccaaaat
cctctgcggtaccgagtccacgttggacaagaggcatatttaagcattttcccggacgtt
aaaagacttgatctcagctactgcaagttgtgctcaccgatccccaacatatggttttcc
ggcttacatcatcttgacagtttagacctgagtttcaataacctggtccaatttccatcc
accgctttgcatagcttgatgaacttgagtgcattaaacttaaattttaataacatcatt
gaattgaaagggaacatttcgtttctctctcatttgagggttttcgcgatttcaaacaat
aaaatcaacttcattcaaactggattcttttctcgtctgcgactaacgaagcttgatctc
agtttcaattacatatcgcgacttgatccaagtattctcaacgaaagcatgttgaagtca
ctttcgtatttggacataaggtggaatgaactcgactgttcctgttacatatgggacaaa
ttttacctctggtatatttctgatgaaagtaacagcactgaacttcctggatttcttccc
gaatgcacaacggacattgatgaatattttggcggttgtgtggcttgccattcgccgttg
aatttgcgtggacgtccggtgtctcgctatggttttaatacgtcgtgtgatttggaaaag
catttcgcccaaatgcttgcatttaccatattctttgtgatgttcttattttgcggtact
attggttatagcaaatggttcaagagattaatatttcgaaaagttaatgaatatttcaga
gttcaatcattgaaaccagacgatgctttttcaagaaagcaaacccgtaattaccagaga
gctttcgtgttctttgaccacaacaataatgaactgggtgattgggtggataataaactg
gtacctgggatgataaacggaaatccttccgttgaacttctcttagccggtcgtgacatc
ggcgtcggttcttcttctactgaaaatcttcttcaacttgtaacaagcagccgcaaaacc
ataatgatattttctggcaacttttgcaaaactccagtttgccgatttatattgacggcg
cttcaagaacttcaatattcagcgggaaaaaatcaactgatattagtggagtggcatggt
gaagaagcagctcgcgttccagaattaattcaaagaactttcaacagaaaatattacaat
ttcctgagatttaatcaaacaaacgatgacgaagcgatgttctttgaaactcttagaact
gcttttgcgagcagcacaatattggatgattaa
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