Clavelina lepadiformis (light-bulb sea squirt): 143449884
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Entry
143449884 CDS
T11416
Name
(RefSeq) toll-like receptor 8
KO
K10170
toll-like receptor 8
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04142
Lysosome biogenesis
clep04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
143449884
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
143449884
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
clep04054
]
143449884
04090 CD molecules [BR:
clep04090
]
143449884
Pattern recognition receptors [BR:
clep04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
143449884
CD molecules [BR:
clep04090
]
Proteins
143449884
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
TIR
TIR_2
YbfB
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
143449884
NCBI-ProteinID:
XP_076806327
LinkDB
All DBs
Position
3:24391089..24394690
Genome browser
AA seq
1080 aa
AA seq
DB search
MGWLLILLLKFLLFSCGSSRNLLNPCDRAVITNIFDMETSAWSTVALAFEQDIFKGSKTW
FNRSYVYINCSCRGLTEVPQNLPEALDLNFNVIRRVKATDFVSYPNISLLFLEMNCLDTV
RPSGVRPLPPCNGDLYIEPGALKRLVYLKHLNLVDSKLREFPRHLPTSLKVLDISFTGLP
DVTAQLRELPNLNVLVSIGNCYFVKDVDRCPKNFTITQPLFSGLQYLDLAVNNWRMIPGY
LLGTQLKVLSLAMNPILRLSKNDFVNATSLEMLNLCSMSLIKSLRSLIIEDGVFDPLIHL
KYLDLSFNLVQFLTDGIFKNNKNLEMLDLSFNCLKLTIFEPTYLVNLHKLRYVDLSSNNV
SVCGTAEPIKSLRLGQAFASLSSLKTIIFGNERKHVHSVLVSMEFHEIDNQSFSNLSNLT
HLSTIDISYCNVHHISSDAWSGLRHLKSIRASNNILSFKEDALSKKDFQTLQTRILEKHF
SFLEKNFEQHKKRTFKIPDLECKKSGLLDYSNNQITTISEQKALLLSKTTILDLSQNRIS
VIRSDDLRHLINLCSIDLSHNPLRSIDPFTFSNLSSLREFDIVGKHMDPYLDLSFLLHFN
PYSKVELNLRTPAGMLVLGFIRLNHLYRANMNSSIVELNIAQSVLNFPHEYEGKGFFKFM
PKLRHLVLRDCKISSPIPDYWFQGSDHLEILDLSHNKLATFPSTSLKILNKLHSLNLDLN
NIIELNGNLTVCPNLKHFTIAHNKIKFIQPGFFLHLKLETLDLSHNYITQLDSSIFSKDV
LNSLQYLDIRWNELDCFCHEWQKFYRWYISDASDNTKLPGFYHKCTSIIDQYYGGCVACH
SPLNLRGRPVSRYGINTSCDLQTHLKYTIAFTIFFVLFMLCGSVGYSKWFKRLIFRKVNE
YFRVQALKPSDVSSRYSTNEGKKAFVFFDHSNDELGDWVDDKLVPGMINGNPSIELLLAG
RDIDAGMSPNENLLRLITKSRKTIVIFSGNFCDTPTCKFVLQALQELQHSAGRDQLILVE
WHGEEAARVPELIQRTFNRKFYNFLRFDQTNDDEVMFFETLRTAFASNTALDRKLLENGK
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgggctggttgctcatattgttgctgaagtttctcctattttcttgcggatcttctaga
aatcttctgaatccttgcgatagggcggttattacaaatatatttgatatggagacgtct
gcgtggtcaacggtagctttggcctttgaacaagacatatttaaaggaagcaaaacttgg
tttaatcgcagctatgtttacattaactgctcgtgtcgaggactaacagaagttccccaa
aatttgccggaagcgttagatctgaacttcaatgtgataagacgagtaaaggcgactgat
tttgtttcttatcccaatataagtttgttgtttttggaaatgaactgcttggacaccgtc
agacctagtggtgtcagacctttgccaccatgcaatggcgatctttacattgagcctggt
gcgttgaaacgacttgtttatttgaaacatttaaatttggttgacagcaaacttcgtgaa
tttccacgccacttaccaacttctctgaaagtattagatataagttttaccgggcttcct
gacgtcactgcgcaacttcgagagttacccaacttaaatgttctagtaagcataggcaat
tgctattttgtaaaagatgtcgaccgttgtccaaaaaattttacaataacacaaccgctc
ttttccggtctacagtatcttgatttggccgttaacaactggagaatgatcccaggatac
ttactcggaacccaactaaaagttctttcgttggcaatgaaccccatacttcgtttaagc
aaaaatgactttgtgaacgcaacaagtttagaaatgttaaatttgtgcagtatgtcactt
atcaaatcgcttcgatcacttatcattgaggatggggtgtttgatccattgatacatctt
aagtatctcgatttatcgttcaatcttgttcaatttttaacagacggaatatttaaaaac
aacaaaaatcttgaaatgttggatctttcttttaattgtttaaaactgacgatattcgaa
ccaacatacttggtcaatctgcataaactacgatatgttgatttgtctagtaacaatgtg
tcggtatgcggaactgcggaaccaatcaaatcacttcgtttgggccaagcttttgcatct
ttgtcttctcttaaaacaataatatttgggaatgaaagaaagcatgttcactcagttttg
gtttccatggaatttcacgaaatcgacaatcaatcattttctaatttatcaaacttaact
catctatccacgatcgatatctcctattgcaatgttcatcacatttcctccgatgcatgg
tctggattacgtcatcttaaatccattcgagcctcgaataacattttaagctttaaagag
gacgcgttaagtaaaaaagattttcaaactttacaaacaagaattctagaaaaacacttc
agttttctagaaaaaaatttcgaacagcataaaaaacgaactttcaagataccggatttg
gaatgcaaaaaaagcggtttacttgactattcaaacaaccaaattacaaccatatctgaa
caaaaagcacttctgttatcaaagacaactattcttgacctatcacaaaatcgaataagt
gtgataagatcagatgatttgagacacctgataaatttgtgcagcatcgacctgtctcat
aatcctcttagaagtatcgatcctttcactttcagtaacttgtcgagtctgcgtgagttt
gatattgttgggaaacatatggacccgtatcttgatttgtcctttcttcttcacttcaat
ccttactctaaagtcgagttaaatttgcggactccagctggaatgttggttttaggtttt
atacgtttgaatcatttatacagagctaacatgaactcgtccatagtagaacttaacatc
gcgcaaagtgttttgaactttccacatgaatacgaaggaaaaggttttttcaagtttatg
cccaagctcagacatcttgtactcagagattgcaaaatttcttcgcctattccagactat
tggtttcaaggatcagaccatcttgaaatcttggacttgagccataacaaattggccaca
tttccatcgacatctttaaaaatcttgaacaagttgcattccttaaatttagatttgaat
aatatcattgaactaaacggaaacttgactgtttgccccaacttgaaacattttactatc
gcccataacaaaatcaagtttattcaaccaggattctttttgcatttgaaacttgaaacc
cttgatctcagtcacaactacataactcaactagactcaagtattttcagcaaagatgtg
ttgaattcacttcagtatttggacataagatggaacgaactcgattgtttttgtcatgag
tggcagaaattttatcgttggtatatttctgatgcaagtgacaacaccaaacttcctggc
ttttatcacaaatgcacttcgattattgaccaatattatggcgggtgtgtggcgtgccat
tccccgctgaatttgcgtggtcgcccggtgtctcgatacggaattaacacatcgtgtgat
ttgcagacacatctcaagtacacaatcgcattcacaatattctttgtattattcatgtta
tgcggcagtgttggttatagcaaatggttcaagagattgatatttcggaaagtcaatgaa
tatttcagagttcaagcattgaagccaagcgacgtttcttcaagatattctacaaacgaa
ggcaagaaagcttttgtattctttgaccacagcaatgatgaactgggtgattgggtggat
gataaactggtacctgggatgattaacggaaacccttccattgaacttctcttagctggt
cgcgatatcgatgctggcatgtctccaaatgaaaatcttctccgtcttatcacgaagagt
cggaaaacaatcgtcatattttctggcaacttttgcgacactccgacttgcaaattcgtg
ttgcaggcgctccaggaacttcaacattctgctggaagagatcaactgatattagtggag
tggcatggtgaagaagcagctcgcgttccagaattaattcaacgaactttcaaccgaaaa
ttttacaacttcctgagattcgaccaaacaaatgacgacgaagttatgttcttcgaaaca
ctgcgaactgctttcgcgagcaacacggcactggataggaaacttcttgagaacggaaag
tga
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